RNA–Protein interactions for RNA: ENST00000521541.1

AF279873.3-203, humanhuman

TSL 2

Gene AF279873.3, Length 661 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF279873.3-203ENST00000521541 AEBP2Q6ZN18 517 aaPredicted RBP25.5■■□□□ 1.67
AF279873.3-203ENST00000521541 CHIC1Q5VXU3 224 aa25.29■■□□□ 1.64
AF279873.3-203ENST00000521541 PHF23Q9BUL5 403 aaPredicted RBP22.16■■□□□ 1.14
AF279873.3-203ENST00000521541 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
AF279873.3-203ENST00000521541 PLPPR3Q6T4P5 718 aa20.77■□□□□ 0.92
AF279873.3-203ENST00000521541 NISCHQ9Y2I1 1504 aa20.21■□□□□ 0.83
AF279873.3-203ENST00000521541 FOXD1Q16676 465 aa20.08■□□□□ 0.81
AF279873.3-203ENST00000521541 ADRA2BP18089 450 aa19.57■□□□□ 0.72
AF279873.3-203ENST00000521541 PPP6R1Q9UPN7 881 aa19.48■□□□□ 0.71
AF279873.3-203ENST00000521541 PIAS4Q8N2W9 510 aaPredicted RBP19.14■□□□□ 0.65
AF279873.3-203ENST00000521541 MSH5O43196 834 aa18.56■□□□□ 0.56
AF279873.3-203ENST00000521541 PPP4R3CPQ6ZMV5 832 aa18.29■□□□□ 0.52
AF279873.3-203ENST00000521541 KCNA4P22459 653 aa18.13■□□□□ 0.49
AF279873.3-203ENST00000521541 SCAF1Q9H7N4 1312 aaKnown RBP18.11■□□□□ 0.49
AF279873.3-203ENST00000521541 CCDC180Q9P1Z9 1646 aa18.11■□□□□ 0.49
AF279873.3-203ENST00000521541 NCBP3Q53F19 620 aaKnown RBP18.04■□□□□ 0.48
AF279873.3-203ENST00000521541 ABCC9O60706 1549 aa17.83■□□□□ 0.45
AF279873.3-203ENST00000521541 CNKSR2Q8WXI2 1034 aa17.75■□□□□ 0.43
AF279873.3-203ENST00000521541 MAPK8IP2Q13387 824 aaPredicted RBP17.63■□□□□ 0.41
AF279873.3-203ENST00000521541 NPM3O75607 178 aaKnown RBP17.58■□□□□ 0.4
AF279873.3-203ENST00000521541 SLC4A1APQ9BWU0 796 aaKnown RBP17.43■□□□□ 0.38
AF279873.3-203ENST00000521541 DMRT2Q9Y5R5 561 aa17.37■□□□□ 0.37
AF279873.3-203ENST00000521541 RNF216Q9NWF9 866 aaPredicted RBP17.3■□□□□ 0.36
AF279873.3-203ENST00000521541 EHMT2Q96KQ7 1210 aa17.27■□□□□ 0.36
AF279873.3-203ENST00000521541 RB1CC1Q8TDY2 1594 aa17.14■□□□□ 0.33
AF279873.3-203ENST00000521541 HOXD11P31277 338 aaPredicted RBP17.08■□□□□ 0.32
AF279873.3-203ENST00000521541 NACADO15069 1562 aa17.06■□□□□ 0.32
AF279873.3-203ENST00000521541 DCAF8L2P0C7V8 631 aa16.93■□□□□ 0.3
AF279873.3-203ENST00000521541 MYO15BQ96JP2 1530 aa16.91■□□□□ 0.3
AF279873.3-203ENST00000521541 DNAJC5BQ9UF47 199 aa16.9■□□□□ 0.3
AF279873.3-203ENST00000521541 DCAF8L1A6NGE4 600 aa16.85■□□□□ 0.29
AF279873.3-203ENST00000521541 ZCCHC6Q5VYS8 1495 aaKnown RBP16.8■□□□□ 0.28
AF279873.3-203ENST00000521541 CSRNP3Q8WYN3 585 aa16.78■□□□□ 0.28
AF279873.3-203ENST00000521541 DCAF1Q9Y4B6 1507 aa16.75■□□□□ 0.27
AF279873.3-203ENST00000521541 UNC13AQ9UPW8 1703 aa16.72■□□□□ 0.27
AF279873.3-203ENST00000521541 FOXD4L1Q9NU39 408 aa16.69■□□□□ 0.26
AF279873.3-203ENST00000521541 PABPN1Q86U42 306 aaKnown RBP eCLIP16.6■□□□□ 0.25
AF279873.3-203ENST00000521541 BICRAQ9NZM4 1560 aa16.57■□□□□ 0.24
AF279873.3-203ENST00000521541 ZBTB22O15209 634 aa16.57■□□□□ 0.24
AF279873.3-203ENST00000521541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.5■□□□□ 0.23
AF279873.3-203ENST00000521541 SHROOM4Q9ULL8 1493 aa16.47■□□□□ 0.23
AF279873.3-203ENST00000521541 SLC4A2P04920 1241 aa16.46■□□□□ 0.23
AF279873.3-203ENST00000521541 SCRIBQ14160 1630 aa16.45■□□□□ 0.22
AF279873.3-203ENST00000521541 MYCNP04198 464 aaPredicted RBP16.33■□□□□ 0.2
AF279873.3-203ENST00000521541 POTEDQ86YR6 584 aa16.3■□□□□ 0.2
AF279873.3-203ENST00000521541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.18■□□□□ 0.18
AF279873.3-203ENST00000521541 HNRNPUL2Q1KMD3 747 aaKnown RBP16.18■□□□□ 0.18
AF279873.3-203ENST00000521541 EIF4G1Q04637 1599 aaKnown RBP16.17■□□□□ 0.18
AF279873.3-203ENST00000521541 CC2D2AQ9P2K1 1620 aa16.16■□□□□ 0.18
AF279873.3-203ENST00000521541 SAMD1Q6SPF0 538 aaPredicted RBP16.09■□□□□ 0.17
AF279873.3-203ENST00000521541 ATXN8OSP0DMR3 200 aa16.07■□□□□ 0.16
AF279873.3-203ENST00000521541 U3KPZ7 1027 aaPredicted RBP16.07■□□□□ 0.16
AF279873.3-203ENST00000521541 CECR2Q9BXF3 1484 aa16.07■□□□□ 0.16
AF279873.3-203ENST00000521541 APLP2Q06481 763 aa16.01■□□□□ 0.15
AF279873.3-203ENST00000521541 RNF39Q9H2S5 420 aa15.81■□□□□ 0.12
AF279873.3-203ENST00000521541 SMARCA4P51532 1647 aa15.73■□□□□ 0.11
AF279873.3-203ENST00000521541 C1QBPQ07021 282 aaKnown RBP15.73■□□□□ 0.11
AF279873.3-203ENST00000521541 NCAPD3P42695 1498 aa15.72■□□□□ 0.11
AF279873.3-203ENST00000521541 ATF5Q9Y2D1 282 aaPredicted RBP15.71■□□□□ 0.11
AF279873.3-203ENST00000521541 BAZ1AQ9NRL2 1556 aaPredicted RBP15.7■□□□□ 0.1
AF279873.3-203ENST00000521541 SMARCA2P51531 1590 aa15.7■□□□□ 0.1
AF279873.3-203ENST00000521541 ATAD2BQ9ULI0 1458 aa15.68■□□□□ 0.1
AF279873.3-203ENST00000521541 HMGXB3Q12766 1538 aa15.65■□□□□ 0.1
AF279873.3-203ENST00000521541 CAPN15O75808 1086 aa15.65■□□□□ 0.1
AF279873.3-203ENST00000521541 TRHP20396 242 aaPredicted RBP15.63■□□□□ 0.09
AF279873.3-203ENST00000521541 ZNF219Q9P2Y4 722 aaPredicted RBP15.62■□□□□ 0.09
AF279873.3-203ENST00000521541 PEG3Q9GZU2 1588 aa15.6■□□□□ 0.09
AF279873.3-203ENST00000521541 BAZ1BQ9UIG0 1483 aaKnown RBP15.56■□□□□ 0.08
AF279873.3-203ENST00000521541 SPINK5Q9NQ38 1064 aaPredicted RBP15.55■□□□□ 0.08
AF279873.3-203ENST00000521541 MROH2BQ7Z745 1585 aa15.54■□□□□ 0.08
AF279873.3-203ENST00000521541 ERCC6Q03468 1493 aa15.43■□□□□ 0.06
AF279873.3-203ENST00000521541 WIZO95785 1651 aa15.38■□□□□ 0.05
AF279873.3-203ENST00000521541 LAMC3Q9Y6N6 1575 aa15.37■□□□□ 0.05
AF279873.3-203ENST00000521541 POLA2Q14181 598 aa15.37■□□□□ 0.05
AF279873.3-203ENST00000521541 CUX2O14529 1486 aa15.37■□□□□ 0.05
AF279873.3-203ENST00000521541 CACNB1Q02641 598 aaPredicted RBP15.36■□□□□ 0.05
AF279873.3-203ENST00000521541 NESP48681 1621 aa15.35■□□□□ 0.05
AF279873.3-203ENST00000521541 FBLN2P98095 1184 aa15.32■□□□□ 0.04
AF279873.3-203ENST00000521541 FKBP8Q14318 412 aa15.31■□□□□ 0.04
AF279873.3-203ENST00000521541 ABCB7O75027 752 aa15.3■□□□□ 0.04
AF279873.3-203ENST00000521541 RSF1Q96T23 1441 aaPredicted RBP15.29■□□□□ 0.04
AF279873.3-203ENST00000521541 PDS5BQ9NTI5 1447 aa15.26■□□□□ 0.03
AF279873.3-203ENST00000521541 CADPSQ9ULU8 1353 aa15.24■□□□□ 0.03
AF279873.3-203ENST00000521541 ZBTB12Q9Y330 459 aaPredicted RBP15.23■□□□□ 0.03
AF279873.3-203ENST00000521541 TOP2AP11388 1531 aaKnown RBP15.22■□□□□ 0.03
AF279873.3-203ENST00000521541 THOC2Q8NI27 1593 aaKnown RBP15.22■□□□□ 0.03
AF279873.3-203ENST00000521541 KIF21AQ7Z4S6 1674 aa15.22■□□□□ 0.03
AF279873.3-203ENST00000521541 DSG3P32926 999 aa15.15■□□□□ 0.02
AF279873.3-203ENST00000521541 CFTRP13569 1480 aa15.12■□□□□ 0.01
AF279873.3-203ENST00000521541 MRC2Q9UBG0 1479 aa15.1■□□□□ 0.01
AF279873.3-203ENST00000521541 DNAJC5Q9H3Z4 198 aa15.09■□□□□ 0.01
AF279873.3-203ENST00000521541 CEP164Q9UPV0 1460 aa15.08■□□□□ 0.01
AF279873.3-203ENST00000521541 FANCD2Q9BXW9 1451 aa15.07■□□□□ 0
AF279873.3-203ENST00000521541 WDR62O43379 1518 aa15.07■□□□□ 0
AF279873.3-203ENST00000521541 MKRN4PQ13434 485 aaPredicted RBP15.04■□□□□ -0
AF279873.3-203ENST00000521541 PRDM2Q13029 1718 aa15.03■□□□□ -0
AF279873.3-203ENST00000521541 CCDC88BA6NC98 1476 aa15.02■□□□□ -0
AF279873.3-203ENST00000521541 SPDYE4A6NLX3 237 aa15.02■□□□□ -0
AF279873.3-203ENST00000521541 URB2Q14146 1524 aaKnown RBP14.92□□□□□ -0.02
AF279873.3-203ENST00000521541 ABCC8Q09428 1581 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms