RNA–Protein interactions for RNA: ENST00000521532.5

EXTL3-210, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-210ENST00000521532 NISCHQ9Y2I1 1504 aa31.63■■■□□ 2.65
EXTL3-210ENST00000521532 CCDC180Q9P1Z9 1646 aa28.25■■■□□ 2.11
EXTL3-210ENST00000521532 ABCC9O60706 1549 aa28.18■■■□□ 2.1
EXTL3-210ENST00000521532 RB1CC1Q8TDY2 1594 aa26.84■■□□□ 1.89
EXTL3-210ENST00000521532 NACADO15069 1562 aa26.72■■□□□ 1.87
EXTL3-210ENST00000521532 DNAJC5BQ9UF47 199 aa26.57■■□□□ 1.84
EXTL3-210ENST00000521532 DCAF8L2P0C7V8 631 aa26.55■■□□□ 1.84
EXTL3-210ENST00000521532 MYO15BQ96JP2 1530 aa26.47■■□□□ 1.83
EXTL3-210ENST00000521532 PABPN1Q86U42 306 aaKnown RBP eCLIP26.27■■□□□ 1.8
EXTL3-210ENST00000521532 ZCCHC6Q5VYS8 1495 aaKnown RBP26.24■■□□□ 1.79
EXTL3-210ENST00000521532 UNC13AQ9UPW8 1703 aa26.23■■□□□ 1.79
EXTL3-210ENST00000521532 DCAF1Q9Y4B6 1507 aa26.16■■□□□ 1.78
EXTL3-210ENST00000521532 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
EXTL3-210ENST00000521532 SHROOM4Q9ULL8 1493 aa25.78■■□□□ 1.72
EXTL3-210ENST00000521532 SCRIBQ14160 1630 aa25.74■■□□□ 1.71
EXTL3-210ENST00000521532 CC2D2AQ9P2K1 1620 aa25.45■■□□□ 1.67
EXTL3-210ENST00000521532 EIF4G1Q04637 1599 aaKnown RBP25.44■■□□□ 1.66
EXTL3-210ENST00000521532 CECR2Q9BXF3 1484 aa25.36■■□□□ 1.65
EXTL3-210ENST00000521532 NCAPD3P42695 1498 aa24.73■■□□□ 1.55
EXTL3-210ENST00000521532 ATAD2BQ9ULI0 1458 aa24.65■■□□□ 1.54
EXTL3-210ENST00000521532 SMARCA4P51532 1647 aa24.61■■□□□ 1.53
EXTL3-210ENST00000521532 SMARCA2P51531 1590 aa24.54■■□□□ 1.52
EXTL3-210ENST00000521532 HMGXB3Q12766 1538 aa24.51■■□□□ 1.51
EXTL3-210ENST00000521532 BAZ1AQ9NRL2 1556 aaPredicted RBP24.5■■□□□ 1.51
EXTL3-210ENST00000521532 PEG3Q9GZU2 1588 aa24.42■■□□□ 1.5
EXTL3-210ENST00000521532 DNAJC5Q9H3Z4 198 aa24.38■■□□□ 1.49
EXTL3-210ENST00000521532 MROH2BQ7Z745 1585 aa24.37■■□□□ 1.49
EXTL3-210ENST00000521532 BAZ1BQ9UIG0 1483 aaKnown RBP24.37■■□□□ 1.49
EXTL3-210ENST00000521532 ERCC6Q03468 1493 aa24.28■■□□□ 1.48
EXTL3-210ENST00000521532 CUX2O14529 1486 aa24.26■■□□□ 1.47
EXTL3-210ENST00000521532 NESP48681 1621 aa24.25■■□□□ 1.47
EXTL3-210ENST00000521532 LAMC3Q9Y6N6 1575 aa24.08■■□□□ 1.44
EXTL3-210ENST00000521532 WIZO95785 1651 aa24.03■■□□□ 1.44
EXTL3-210ENST00000521532 THOC2Q8NI27 1593 aaKnown RBP23.99■■□□□ 1.43
EXTL3-210ENST00000521532 CADPSQ9ULU8 1353 aa23.97■■□□□ 1.43
EXTL3-210ENST00000521532 RSF1Q96T23 1441 aaPredicted RBP23.95■■□□□ 1.42
EXTL3-210ENST00000521532 PDS5BQ9NTI5 1447 aa23.95■■□□□ 1.42
EXTL3-210ENST00000521532 KIF21AQ7Z4S6 1674 aa23.91■■□□□ 1.42
EXTL3-210ENST00000521532 TOP2AP11388 1531 aaKnown RBP23.76■■□□□ 1.39
EXTL3-210ENST00000521532 MRC2Q9UBG0 1479 aa23.74■■□□□ 1.39
EXTL3-210ENST00000521532 CFTRP13569 1480 aa23.73■■□□□ 1.39
EXTL3-210ENST00000521532 WDR62O43379 1518 aa23.68■■□□□ 1.38
EXTL3-210ENST00000521532 FANCD2Q9BXW9 1451 aa23.66■■□□□ 1.38
EXTL3-210ENST00000521532 CEP164Q9UPV0 1460 aa23.65■■□□□ 1.38
EXTL3-210ENST00000521532 CCDC88BA6NC98 1476 aa23.53■■□□□ 1.36
EXTL3-210ENST00000521532 URB2Q14146 1524 aaKnown RBP23.48■■□□□ 1.35
EXTL3-210ENST00000521532 PRDM2Q13029 1718 aa23.34■■□□□ 1.33
EXTL3-210ENST00000521532 TRIM41Q8WV44 630 aa23.32■■□□□ 1.32
EXTL3-210ENST00000521532 TOPBP1Q92547 1522 aa23.23■■□□□ 1.31
EXTL3-210ENST00000521532 IFT140Q96RY7 1462 aa23.19■■□□□ 1.3
EXTL3-210ENST00000521532 ABCC8Q09428 1581 aa23.18■■□□□ 1.3
EXTL3-210ENST00000521532 OSCARQ8IYS5 282 aa23.16■■□□□ 1.3
EXTL3-210ENST00000521532 ZNF608Q9ULD9 1512 aaPredicted RBP23.16■■□□□ 1.3
EXTL3-210ENST00000521532 DNMBPQ6XZF7 1577 aa23.13■■□□□ 1.29
EXTL3-210ENST00000521532 TARBP1Q13395 1621 aaKnown RBP23.01■■□□□ 1.27
EXTL3-210ENST00000521532 POLA1P09884 1462 aaPredicted RBP23.01■■□□□ 1.27
EXTL3-210ENST00000521532 EIF4G3O43432 1585 aaKnown RBP22.97■■□□□ 1.27
EXTL3-210ENST00000521532 AQRO60306 1485 aaKnown RBP eCLIP22.97■■□□□ 1.27
EXTL3-210ENST00000521532 RIMBP3CA6NJZ7 1639 aa22.94■■□□□ 1.26
EXTL3-210ENST00000521532 RIMBP3BA6NNM3 1639 aa22.94■■□□□ 1.26
EXTL3-210ENST00000521532 RIMBP3Q9UFD9 1639 aa22.94■■□□□ 1.26
EXTL3-210ENST00000521532 RAD54L2Q9Y4B4 1467 aa22.92■■□□□ 1.26
EXTL3-210ENST00000521532 SOGA1O94964 1423 aa22.91■■□□□ 1.26
EXTL3-210ENST00000521532 SUPT5HO00267 1087 aaKnown RBP22.9■■□□□ 1.26
EXTL3-210ENST00000521532 CUX1P39880 1505 aa22.89■■□□□ 1.26
EXTL3-210ENST00000521532 FGD5Q6ZNL6 1462 aa22.86■■□□□ 1.25
EXTL3-210ENST00000521532 TDRD9Q8NDG6 1382 aaKnown RBP22.85■■□□□ 1.25
EXTL3-210ENST00000521532 ARHGEF11O15085 1522 aa22.82■■□□□ 1.24
EXTL3-210ENST00000521532 CHD1O14646 1710 aa22.81■■□□□ 1.24
EXTL3-210ENST00000521532 WDR97A6NE52 1622 aa22.76■■□□□ 1.23
EXTL3-210ENST00000521532 FBLN2P98095 1184 aa22.72■■□□□ 1.23
EXTL3-210ENST00000521532 SNAPC4Q5SXM2 1469 aa22.71■■□□□ 1.23
EXTL3-210ENST00000521532 GRIN2BQ13224 1484 aa22.68■■□□□ 1.22
EXTL3-210ENST00000521532 MAGI1Q96QZ7 1491 aaPredicted RBP22.66■■□□□ 1.22
EXTL3-210ENST00000521532 ABCA10Q8WWZ4 1543 aa22.64■■□□□ 1.21
EXTL3-210ENST00000521532 ARAP1Q96P48 1450 aa22.62■■□□□ 1.21
EXTL3-210ENST00000521532 GAPVD1Q14C86 1478 aa22.61■■□□□ 1.21
EXTL3-210ENST00000521532 CYB5RLQ6IPT4 315 aa22.61■■□□□ 1.21
EXTL3-210ENST00000521532 CHMP7Q8WUX9 453 aaPredicted RBP22.61■■□□□ 1.21
EXTL3-210ENST00000521532 SYNJ2O15056 1496 aa22.6■■□□□ 1.21
EXTL3-210ENST00000521532 CLASP1Q7Z460 1538 aa22.58■■□□□ 1.21
EXTL3-210ENST00000521532 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.2
EXTL3-210ENST00000521532 ABCA5Q8WWZ7 1642 aa22.56■■□□□ 1.2
EXTL3-210ENST00000521532 TOP2BQ02880 1626 aa22.53■■□□□ 1.2
EXTL3-210ENST00000521532 SYNJ1O43426 1573 aa22.51■■□□□ 1.19
EXTL3-210ENST00000521532 BIVM-ERCC5R4GMW8 1640 aa22.5■■□□□ 1.19
EXTL3-210ENST00000521532 PBRM1Q86U86 1689 aa22.5■■□□□ 1.19
EXTL3-210ENST00000521532 GRIN2AQ12879 1464 aa22.39■■□□□ 1.17
EXTL3-210ENST00000521532 TRHP20396 242 aaPredicted RBP22.38■■□□□ 1.17
EXTL3-210ENST00000521532 ADAMTS12P58397 1594 aa22.37■■□□□ 1.17
EXTL3-210ENST00000521532 FHAD1B1AJZ9 1412 aa22.35■■□□□ 1.17
EXTL3-210ENST00000521532 NUP160Q12769 1436 aa22.35■■□□□ 1.17
EXTL3-210ENST00000521532 ERICH3Q5RHP9 1530 aa22.34■■□□□ 1.17
EXTL3-210ENST00000521532 CEP170Q5SW79 1584 aa22.29■■□□□ 1.16
EXTL3-210ENST00000521532 ERCC6L2Q5T890 1561 aa22.24■■□□□ 1.15
EXTL3-210ENST00000521532 SHROOM2Q13796 1616 aa22.19■■□□□ 1.14
EXTL3-210ENST00000521532 IGF1RP08069 1367 aa22.14■■□□□ 1.14
EXTL3-210ENST00000521532 JPH4Q96JJ6 628 aa22.12■■□□□ 1.13
EXTL3-210ENST00000521532 KIF27Q86VH2 1401 aa22.1■■□□□ 1.13
EXTL3-210ENST00000521532 PRG4Q92954 1404 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms