RNA–Protein interactions for RNA: ENST00000521332.5

PTK2-231, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-231ENST00000521332 SLBPQ14493 270 aaKnown RBP eCLIP16.97■□□□□ 0.313e-8■■■■■ 184.8
PTK2-231ENST00000521332 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.39■□□□□ 0.692e-6■■■■■ 149.1
PTK2-231ENST00000521332 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.72■□□□□ 0.436e-8■■■■■ 80.4
PTK2-231ENST00000521332 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.69■□□□□ 0.13e-6■■■■■ 50.8
PTK2-231ENST00000521332 PUS1Q9Y606 427 aaKnown RBP eCLIP13.29□□□□□ -0.281e-5■■■■■ 49.7
PTK2-231ENST00000521332 PTBP1P26599 531 aaKnown RBP eCLIP13.53□□□□□ -0.241e-13■■■■■ 48.4
PTK2-231ENST00000521332 SF3B1O75533 1304 aaKnown RBP eCLIP20.36■□□□□ 0.853e-7■■■■■ 46.8
PTK2-231ENST00000521332 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.15■□□□□ 0.183e-10■■■■■ 43.4
PTK2-231ENST00000521332 PCBP2Q15366 365 aaKnown RBP eCLIP16.86■□□□□ 0.293e-7■■■■■ 37.8
PTK2-231ENST00000521332 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.43■□□□□ 0.864e-9■■■■■ 36.3
PTK2-231ENST00000521332 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.98□□□□□ -0.012e-6■■■■■ 36.1
PTK2-231ENST00000521332 GTF2F1P35269 517 aaKnown RBP eCLIP21.13■□□□□ 0.973e-7■■■■■ 36
PTK2-231ENST00000521332 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.69■■□□□ 1.223e-7■■■■■ 34.8
PTK2-231ENST00000521332 XRCC6P12956 609 aaKnown RBP eCLIP20.23■□□□□ 0.839e-7■■■■■ 34.5
PTK2-231ENST00000521332 PRPF4O43172 522 aaKnown RBP eCLIP17.45■□□□□ 0.382e-7■■■■■ 32.7
PTK2-231ENST00000521332 EWSR1Q01844 656 aaKnown RBP eCLIP13.73□□□□□ -0.211e-6■■■■■ 26.8
PTK2-231ENST00000521332 DKC1O60832 514 aaKnown RBP eCLIP20.51■□□□□ 0.871e-5■■■■□ 25.7
PTK2-231ENST00000521332 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.68□□□□□ -0.067e-7■■■■□ 24.7
PTK2-231ENST00000521332 AQRO60306 1485 aaKnown RBP eCLIP34■■■■□ 3.033e-6■■■■□ 24.7
PTK2-231ENST00000521332 HNRNPMP52272 730 aaKnown RBP eCLIP29.86■■■□□ 2.371e-6■■■■□ 24.2
PTK2-231ENST00000521332 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.69■□□□□ 0.584e-8■■■■□ 23.4
PTK2-231ENST00000521332 EIF4G2P78344 907 aaKnown RBP eCLIP25.09■■□□□ 1.611e-6■■■■□ 21.9
PTK2-231ENST00000521332 DDX3XO00571 662 aaKnown RBP eCLIP18.07■□□□□ 0.486e-14■■■■□ 21.8
PTK2-231ENST00000521332 HLTFQ14527 1009 aaKnown RBP eCLIP18.45■□□□□ 0.548e-6■■■■□ 21.3
PTK2-231ENST00000521332 TARDBPQ13148 414 aaKnown RBP eCLIP19.06■□□□□ 0.644e-6■■■■□ 21
PTK2-231ENST00000521332 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.24■■□□□ 1.792e-6■■■■□ 20.6
PTK2-231ENST00000521332 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.55■□□□□ 0.47e-9■■■■□ 20.2
PTK2-231ENST00000521332 QKIQ96PU8 341 aaKnown RBP eCLIP17.7■□□□□ 0.422e-14■■■■□ 19.4
PTK2-231ENST00000521332 MATR3P43243 847 aaKnown RBP eCLIP20.04■□□□□ 0.87e-7■■■□□ 19
PTK2-231ENST00000521332 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.16■□□□□ 0.187e-8■■■□□ 15.2
PTK2-231ENST00000521332 NKRFO15226 690 aaKnown RBP eCLIP21.6■■□□□ 1.052e-10■■■□□ 14.6
PTK2-231ENST00000521332 HNRNPKP61978 463 aaKnown RBP eCLIP18.79■□□□□ 0.62e-6■■□□□ 14.5
PTK2-231ENST00000521332 SFPQP23246 707 aaKnown RBP eCLIP20.66■□□□□ 0.95e-7■■□□□ 14.5
PTK2-231ENST00000521332 KHSRPQ92945 711 aaKnown RBP eCLIP21.43■■□□□ 1.022e-6■■□□□ 14.2
PTK2-231ENST00000521332 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.29■■■□□ 2.284e-14■■□□□ 14.2
PTK2-231ENST00000521332 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.09■□□□□ 0.652e-7■■□□□ 13.8
PTK2-231ENST00000521332 EFTUD2Q15029 972 aaKnown RBP eCLIP16.94■□□□□ 0.32e-6■■□□□ 13.7
PTK2-231ENST00000521332 SRSF9Q13242 221 aaKnown RBP eCLIP11.37□□□□□ -0.592e-7■■□□□ 13.7
PTK2-231ENST00000521332 U2AF2P26368 475 aaKnown RBP eCLIP19.88■□□□□ 0.772e-10■■□□□ 13.5
PTK2-231ENST00000521332 FXR2P51116 673 aaKnown RBP eCLIP20.02■□□□□ 0.82e-10■■□□□ 12.3
PTK2-231ENST00000521332 ILF3Q12906 894 aaKnown RBP eCLIP18.39■□□□□ 0.537e-8■■□□□ 12.2
PTK2-231ENST00000521332 FMR1Q06787 632 aaKnown RBP eCLIP24.26■■□□□ 1.474e-6■■□□□ 11.8
PTK2-231ENST00000521332 YBX3P16989 372 aaKnown RBP eCLIP25.7■■□□□ 1.74e-9■■□□□ 11.5
PTK2-231ENST00000521332 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.71■■■□□ 2.512e-6■■□□□ 11.5
PTK2-231ENST00000521332 NONOQ15233 471 aaKnown RBP eCLIP20.53■□□□□ 0.885e-8■■□□□ 11.4
PTK2-231ENST00000521332 TIA1P31483 386 aaKnown RBP eCLIP16.39■□□□□ 0.212e-7■□□□□ 10
PTK2-231ENST00000521332 HNRNPCP07910 306 aaKnown RBP eCLIP13.12□□□□□ -0.319e-7■□□□□ 9.9
PTK2-231ENST00000521332 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.38■■□□□ 1.659e-22■□□□□ 9.1
PTK2-231ENST00000521332 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.7■□□□□ 0.427e-7■□□□□ 8.5
PTK2-231ENST00000521332 HNRNPLP14866 589 aaKnown RBP eCLIP19.59■□□□□ 0.731e-7■□□□□ 8.5
Retrieved 50 of 50 RNA–protein pairs in 11.3 ms