RNA–Protein interactions for RNA: ENST00000521086.6

TCEA1-207, Transcript of transcription elongation factor A1, humanhuman

TSL 1 (best)

Gene TCEA1, Length 2,966 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-207ENST00000521086 NISCHQ9Y2I1 1504 aa29.99■■■□□ 2.39
TCEA1-207ENST00000521086 DCAF8L2P0C7V8 631 aa26.16■■□□□ 1.78
TCEA1-207ENST00000521086 SHROOM4Q9ULL8 1493 aa25.73■■□□□ 1.71
TCEA1-207ENST00000521086 CCDC180Q9P1Z9 1646 aa25.56■■□□□ 1.68
TCEA1-207ENST00000521086 ABCC9O60706 1549 aa25.31■■□□□ 1.64
TCEA1-207ENST00000521086 ZCCHC6Q5VYS8 1495 aaKnown RBP25.09■■□□□ 1.61
TCEA1-207ENST00000521086 SUPT5HO00267 1087 aaKnown RBP24.78■■□□□ 1.56
TCEA1-207ENST00000521086 SCRIBQ14160 1630 aa24.42■■□□□ 1.5
TCEA1-207ENST00000521086 PABPN1Q86U42 306 aaKnown RBP eCLIP24.27■■□□□ 1.48
TCEA1-207ENST00000521086 DCAF1Q9Y4B6 1507 aa24.2■■□□□ 1.46
TCEA1-207ENST00000521086 NACADO15069 1562 aa24■■□□□ 1.43
TCEA1-207ENST00000521086 RB1CC1Q8TDY2 1594 aa23.93■■□□□ 1.42
TCEA1-207ENST00000521086 CECR2Q9BXF3 1484 aa23.78■■□□□ 1.4
TCEA1-207ENST00000521086 MYO15BQ96JP2 1530 aa23.76■■□□□ 1.39
TCEA1-207ENST00000521086 UNC13AQ9UPW8 1703 aa23.6■■□□□ 1.37
TCEA1-207ENST00000521086 RSF1Q96T23 1441 aaPredicted RBP23.53■■□□□ 1.36
TCEA1-207ENST00000521086 MROH2BQ7Z745 1585 aa23.46■■□□□ 1.35
TCEA1-207ENST00000521086 BICRAQ9NZM4 1560 aa23.39■■□□□ 1.33
TCEA1-207ENST00000521086 WIZO95785 1651 aa23.3■■□□□ 1.32
TCEA1-207ENST00000521086 EHMT2Q96KQ7 1210 aa23.26■■□□□ 1.31
TCEA1-207ENST00000521086 CHIC1Q5VXU3 224 aa23.25■■□□□ 1.31
TCEA1-207ENST00000521086 FAM9AQ8IZU1 332 aaPredicted RBP23.08■■□□□ 1.29
TCEA1-207ENST00000521086 BAZ1AQ9NRL2 1556 aaPredicted RBP23.03■■□□□ 1.28
TCEA1-207ENST00000521086 SMARCA4P51532 1647 aa23.01■■□□□ 1.27
TCEA1-207ENST00000521086 LOC105371045A0A1W2PR82 267 aa22.9■■□□□ 1.26
TCEA1-207ENST00000521086 TRIM41Q8WV44 630 aa22.89■■□□□ 1.25
TCEA1-207ENST00000521086 DNAJC5BQ9UF47 199 aa22.86■■□□□ 1.25
TCEA1-207ENST00000521086 CCDC88BA6NC98 1476 aa22.78■■□□□ 1.24
TCEA1-207ENST00000521086 ATAD2BQ9ULI0 1458 aa22.75■■□□□ 1.23
TCEA1-207ENST00000521086 EIF4G1Q04637 1599 aaKnown RBP22.73■■□□□ 1.23
TCEA1-207ENST00000521086 BAZ1BQ9UIG0 1483 aaKnown RBP22.69■■□□□ 1.22
TCEA1-207ENST00000521086 TOP2AP11388 1531 aaKnown RBP22.64■■□□□ 1.21
TCEA1-207ENST00000521086 ABCC8Q09428 1581 aa22.6■■□□□ 1.21
TCEA1-207ENST00000521086 SMARCA2P51531 1590 aa22.59■■□□□ 1.21
TCEA1-207ENST00000521086 CC2D2AQ9P2K1 1620 aa22.49■■□□□ 1.19
TCEA1-207ENST00000521086 RANGAP1P46060 587 aaPredicted RBP22.35■■□□□ 1.17
TCEA1-207ENST00000521086 PEG3Q9GZU2 1588 aa22.34■■□□□ 1.17
TCEA1-207ENST00000521086 NCAPD3P42695 1498 aa22.34■■□□□ 1.17
TCEA1-207ENST00000521086 PPARGC1BQ86YN6 1023 aaKnown RBP22.24■■□□□ 1.15
TCEA1-207ENST00000521086 NESP48681 1621 aa22.23■■□□□ 1.15
TCEA1-207ENST00000521086 SOGA1O94964 1423 aa22.22■■□□□ 1.15
TCEA1-207ENST00000521086 RUSC2Q8N2Y8 1516 aa22.22■■□□□ 1.15
TCEA1-207ENST00000521086 TTBK1Q5TCY1 1321 aaPredicted RBP22.15■■□□□ 1.14
TCEA1-207ENST00000521086 WRNQ14191 1432 aaPredicted RBP eCLIP22.14■■□□□ 1.14
TCEA1-207ENST00000521086 HMGXB3Q12766 1538 aa22.1■■□□□ 1.13
TCEA1-207ENST00000521086 UBTFP17480 764 aaKnown RBP22.05■■□□□ 1.12
TCEA1-207ENST00000521086 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
TCEA1-207ENST00000521086 CADPSQ9ULU8 1353 aa22.02■■□□□ 1.12
TCEA1-207ENST00000521086 CFTRP13569 1480 aa21.95■■□□□ 1.1
TCEA1-207ENST00000521086 CSRNP3Q8WYN3 585 aa21.94■■□□□ 1.1
TCEA1-207ENST00000521086 PCGF6Q9BYE7 350 aa21.88■■□□□ 1.09
TCEA1-207ENST00000521086 CUX1P39880 1505 aa21.84■■□□□ 1.09
TCEA1-207ENST00000521086 FANCD2Q9BXW9 1451 aa21.83■■□□□ 1.09
TCEA1-207ENST00000521086 RAD54L2Q9Y4B4 1467 aa21.75■■□□□ 1.07
TCEA1-207ENST00000521086 TDRD9Q8NDG6 1382 aaKnown RBP21.66■■□□□ 1.06
TCEA1-207ENST00000521086 FGD5Q6ZNL6 1462 aa21.66■■□□□ 1.06
TCEA1-207ENST00000521086 TOP2BQ02880 1626 aa21.65■■□□□ 1.06
TCEA1-207ENST00000521086 CUX2O14529 1486 aa21.64■■□□□ 1.06
TCEA1-207ENST00000521086 RAPGEF2Q9Y4G8 1499 aa21.62■■□□□ 1.05
TCEA1-207ENST00000521086 P3H3Q8IVL6 736 aa21.62■■□□□ 1.05
TCEA1-207ENST00000521086 CEP164Q9UPV0 1460 aa21.6■■□□□ 1.05
TCEA1-207ENST00000521086 URB2Q14146 1524 aaKnown RBP21.56■■□□□ 1.04
TCEA1-207ENST00000521086 KIF21AQ7Z4S6 1674 aa21.55■■□□□ 1.04
TCEA1-207ENST00000521086 PDS5BQ9NTI5 1447 aa21.55■■□□□ 1.04
TCEA1-207ENST00000521086 ERCC6Q03468 1493 aa21.54■■□□□ 1.04
TCEA1-207ENST00000521086 TOPBP1Q92547 1522 aa21.53■■□□□ 1.04
TCEA1-207ENST00000521086 CEP162Q5TB80 1403 aa21.51■■□□□ 1.03
TCEA1-207ENST00000521086 POLA1P09884 1462 aaPredicted RBP21.51■■□□□ 1.03
TCEA1-207ENST00000521086 KIF27Q86VH2 1401 aa21.49■■□□□ 1.03
TCEA1-207ENST00000521086 ATP1B4Q9UN42 357 aaPredicted RBP21.49■■□□□ 1.03
TCEA1-207ENST00000521086 BIVM-ERCC5R4GMW8 1640 aa21.48■■□□□ 1.03
TCEA1-207ENST00000521086 FBLN2P98095 1184 aa21.48■■□□□ 1.03
TCEA1-207ENST00000521086 LAMC3Q9Y6N6 1575 aa21.47■■□□□ 1.03
TCEA1-207ENST00000521086 IGF1RP08069 1367 aa21.45■■□□□ 1.02
TCEA1-207ENST00000521086 GOLGA3Q08378 1498 aa21.43■■□□□ 1.02
TCEA1-207ENST00000521086 AQRO60306 1485 aaKnown RBP eCLIP21.42■■□□□ 1.024e-8■■■■□ 23.2
TCEA1-207ENST00000521086 PRDM2Q13029 1718 aa21.39■■□□□ 1.01
TCEA1-207ENST00000521086 EEA1Q15075 1411 aa21.38■■□□□ 1.01
TCEA1-207ENST00000521086 TNIKQ9UKE5 1360 aa21.38■■□□□ 1.01
TCEA1-207ENST00000521086 CARMIL1Q5VZK9 1371 aa21.37■■□□□ 1.01
TCEA1-207ENST00000521086 ARID3CA6NKF2 412 aa21.36■■□□□ 1.01
TCEA1-207ENST00000521086 DNMBPQ6XZF7 1577 aa21.35■■□□□ 1.01
TCEA1-207ENST00000521086 CLIP1P30622 1438 aa21.32■■□□□ 1
TCEA1-207ENST00000521086 ZNF608Q9ULD9 1512 aaPredicted RBP21.32■■□□□ 1
TCEA1-207ENST00000521086 TRIM26Q12899 539 aaPredicted RBP21.27■■□□□ 1
TCEA1-207ENST00000521086 PRXQ9BXM0 1461 aa21.26■□□□□ 0.99
TCEA1-207ENST00000521086 MRC2Q9UBG0 1479 aa21.23■□□□□ 0.99
TCEA1-207ENST00000521086 GAPVD1Q14C86 1478 aa21.2■□□□□ 0.98
TCEA1-207ENST00000521086 APLP2Q06481 763 aa21.18■□□□□ 0.98
TCEA1-207ENST00000521086 ABCA10Q8WWZ4 1543 aa21.17■□□□□ 0.98
TCEA1-207ENST00000521086 KIF21BO75037 1637 aa21.16■□□□□ 0.98
TCEA1-207ENST00000521086 KANK4Q5T7N3 995 aaPredicted RBP21.15■□□□□ 0.98
TCEA1-207ENST00000521086 HNRNPUL2Q1KMD3 747 aaKnown RBP21.12■□□□□ 0.97
TCEA1-207ENST00000521086 ITGAEP38570 1179 aa21.1■□□□□ 0.97
TCEA1-207ENST00000521086 CHMP7Q8WUX9 453 aaPredicted RBP21.09■□□□□ 0.97
TCEA1-207ENST00000521086 ARAP1Q96P48 1450 aa21.09■□□□□ 0.97
TCEA1-207ENST00000521086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.06■□□□□ 0.96
TCEA1-207ENST00000521086 FHOD3Q2V2M9 1422 aa21.05■□□□□ 0.96
TCEA1-207ENST00000521086 TARBP1Q13395 1621 aaKnown RBP21.04■□□□□ 0.96
TCEA1-207ENST00000521086 ARHGAP35Q9NRY4 1499 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms