RNA–Protein interactions for RNA: ENST00000520627.1

RPS20-207, Transcript of ribosomal protein S20, humanhuman

TSL 5 BASIC

Gene RPS20, Length 423 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS20-207ENST00000520627 DKC1O60832 514 aaKnown RBP eCLIP10.53□□□□□ -0.721e-323■■■■□ 26.7
RPS20-207ENST00000520627 NOLC1Q14978 699 aaKnown RBP eCLIP10.24□□□□□ -0.771e-323■■■■■ 136.5
RPS20-207ENST00000520627 TROVE2P10155 538 aaKnown RBP eCLIP8.2□□□□□ -1.11e-323■■□□□ 13
RPS20-207ENST00000520627 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.22■□□□□ 0.031e-70■□□□□ 10.3
RPS20-207ENST00000520627 SMNDC1O75940 238 aaKnown RBP eCLIP8.43□□□□□ -1.062e-69■■■■■ 35.4
RPS20-207ENST00000520627 NIP7Q9Y221 180 aaKnown RBP eCLIP12.24□□□□□ -0.452e-61■■■■■ 27.2
RPS20-207ENST00000520627 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.69□□□□□ -0.72e-59■■□□□ 12.1
RPS20-207ENST00000520627 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.12□□□□□ -0.951e-58■□□□□ 10.1
RPS20-207ENST00000520627 DDX3XO00571 662 aaKnown RBP eCLIP9.48□□□□□ -0.892e-37■■■□□ 16.9
RPS20-207ENST00000520627 DDX6P26196 483 aaKnown RBP eCLIP10.03□□□□□ -0.81e-34■□□□□ 8.9
RPS20-207ENST00000520627 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.45□□□□□ -1.062e-34■□□□□ 8.8
RPS20-207ENST00000520627 ZRANB2O95218 330 aaKnown RBP eCLIP9.28□□□□□ -0.922e-32■□□□□ 10.3
RPS20-207ENST00000520627 DDX21Q9NR30 783 aaKnown RBP eCLIP12.16□□□□□ -0.462e-29■□□□□ 9.6
RPS20-207ENST00000520627 TRA2AQ13595 282 aaKnown RBP eCLIP9.26□□□□□ -0.932e-26■■□□□ 14.2
RPS20-207ENST00000520627 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.47□□□□□ -0.896e-24■■□□□ 11.6
RPS20-207ENST00000520627 AATFQ9NY61 560 aaKnown RBP eCLIP11.4□□□□□ -0.588e-21■■■■□ 22.3
RPS20-207ENST00000520627 PTBP1P26599 531 aaKnown RBP eCLIP7.08□□□□□ -1.281e-20■■■■□ 23.8
RPS20-207ENST00000520627 PABPC4Q13310 644 aaKnown RBP eCLIP11.35□□□□□ -0.595e-19■■■■□ 21.5
RPS20-207ENST00000520627 XRCC6P12956 609 aaKnown RBP eCLIP10.4□□□□□ -0.749e-18■■□□□ 12
RPS20-207ENST00000520627 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.79□□□□□ -0.681e-16■■■■□ 20.3
RPS20-207ENST00000520627 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.81□□□□□ -0.842e-16■□□□□ 8.6
RPS20-207ENST00000520627 RBM15Q96T37 977 aaKnown RBP eCLIP9.36□□□□□ -0.919e-16■□□□□ 9.2
RPS20-207ENST00000520627 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.77□□□□□ -1.011e-15■■□□□ 13.1
RPS20-207ENST00000520627 YBX3P16989 372 aaKnown RBP eCLIP12.44□□□□□ -0.421e-15■□□□□ 10.3
RPS20-207ENST00000520627 AARSP49588 968 aaKnown RBP eCLIP10.13□□□□□ -0.791e-14■■□□□ 14
RPS20-207ENST00000520627 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.71□□□□□ -1.021e-14■□□□□ 8.1
RPS20-207ENST00000520627 EFTUD2Q15029 972 aaKnown RBP eCLIP8.75□□□□□ -1.017e-14■■■■■ 59.3
RPS20-207ENST00000520627 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.38□□□□□ -0.119e-14■□□□□ 10.5
RPS20-207ENST00000520627 PUM1Q14671 1186 aaKnown RBP eCLIP9.85□□□□□ -0.832e-13■□□□□ 9.2
RPS20-207ENST00000520627 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.04□□□□□ -1.128e-13■■■■■ 33.8
RPS20-207ENST00000520627 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.33□□□□□ -0.922e-12■■■■■ 33
RPS20-207ENST00000520627 RPS3P23396 243 aaKnown RBP eCLIP9.03□□□□□ -0.963e-11■■■□□ 14.9
RPS20-207ENST00000520627 SF3B4Q15427 424 aaKnown RBP eCLIP8.58□□□□□ -1.043e-11■■■■■ 27.3
RPS20-207ENST00000520627 LARP4Q71RC2 724 aaKnown RBP eCLIP8.53□□□□□ -1.044e-10■■□□□ 11.8
RPS20-207ENST00000520627 AQRO60306 1485 aaKnown RBP eCLIP16.64■□□□□ 0.252e-9■■■■□ 21.3
RPS20-207ENST00000520627 KHSRPQ92945 711 aaKnown RBP eCLIP10.32□□□□□ -0.763e-9■■■□□ 16.5
RPS20-207ENST00000520627 EIF3GO75821 320 aaKnown RBP eCLIP6.46□□□□□ -1.385e-9■□□□□ 9.5
RPS20-207ENST00000520627 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.6□□□□□ -0.716e-8■■□□□ 13.7
RPS20-207ENST00000520627 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.88□□□□□ -0.839e-8■■■■■ 86.3
RPS20-207ENST00000520627 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.36□□□□□ -0.111e-7■□□□□ 9
RPS20-207ENST00000520627 GPKOWQ92917 476 aaPredicted RBP eCLIP10.72□□□□□ -0.691e-7■■□□□ 13.9
RPS20-207ENST00000520627 NIPBLQ6KC79 2804 aaeCLIP8.26□□□□□ -1.091e-7■□□□□ 11.1
RPS20-207ENST00000520627 G3BP1Q13283 466 aaKnown RBP eCLIP11.55□□□□□ -0.562e-7■■■□□ 15.2
RPS20-207ENST00000520627 AKAP1Q92667 903 aaKnown RBP eCLIP8.28□□□□□ -1.083e-7■□□□□ 11.1
RPS20-207ENST00000520627 RBM22Q9NW64 420 aaKnown RBP eCLIP9.35□□□□□ -0.913e-7■■■■□ 22.2
RPS20-207ENST00000520627 HLTFQ14527 1009 aaKnown RBP eCLIP9.31□□□□□ -0.923e-7■■□□□ 11.9
RPS20-207ENST00000520627 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.79□□□□□ -0.844e-7■□□□□ 10.5
RPS20-207ENST00000520627 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.97□□□□□ -0.975e-7■■■■□ 19.7
RPS20-207ENST00000520627 SUB1P53999 127 aaKnown RBP eCLIP7□□□□□ -1.297e-7■■□□□ 13.2
Retrieved 49 of 49 RNA–protein pairs in 6.6 ms