RNA–Protein interactions for RNA: ENST00000520486.5

CCDC25-207, Transcript of coiled-coil domain containing 25, humanhuman

TSL 1 (best)

Gene CCDC25, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-207ENST00000520486 NISCHQ9Y2I1 1504 aa19.23■□□□□ 0.67
CCDC25-207ENST00000520486 SHROOM4Q9ULL8 1493 aa17.11■□□□□ 0.33
CCDC25-207ENST00000520486 DCAF8L2P0C7V8 631 aa16.88■□□□□ 0.29
CCDC25-207ENST00000520486 SUPT5HO00267 1087 aaKnown RBP16.77■□□□□ 0.28
CCDC25-207ENST00000520486 ZCCHC6Q5VYS8 1495 aaKnown RBP16.18■□□□□ 0.18
CCDC25-207ENST00000520486 CCDC180Q9P1Z9 1646 aa16.02■□□□□ 0.15
CCDC25-207ENST00000520486 CHIC1Q5VXU3 224 aa15.95■□□□□ 0.14
CCDC25-207ENST00000520486 MYO15BQ96JP2 1530 aa15.84■□□□□ 0.13
CCDC25-207ENST00000520486 EHMT2Q96KQ7 1210 aa15.78■□□□□ 0.12
CCDC25-207ENST00000520486 LOC105371045A0A1W2PR82 267 aa15.77■□□□□ 0.12
CCDC25-207ENST00000520486 PCGF6Q9BYE7 350 aa15.68■□□□□ 0.1
CCDC25-207ENST00000520486 FAM9AQ8IZU1 332 aaPredicted RBP15.62■□□□□ 0.09
CCDC25-207ENST00000520486 ABCC9O60706 1549 aa15.62■□□□□ 0.09
CCDC25-207ENST00000520486 SCRIBQ14160 1630 aa15.56■□□□□ 0.08
CCDC25-207ENST00000520486 PPARGC1BQ86YN6 1023 aaKnown RBP15.43■□□□□ 0.06
CCDC25-207ENST00000520486 DCAF1Q9Y4B6 1507 aa15.43■□□□□ 0.06
CCDC25-207ENST00000520486 TRIM41Q8WV44 630 aa15.41■□□□□ 0.06
CCDC25-207ENST00000520486 RSF1Q96T23 1441 aaPredicted RBP15.34■□□□□ 0.05
CCDC25-207ENST00000520486 HRCP23327 699 aa15.33■□□□□ 0.04
CCDC25-207ENST00000520486 CECR2Q9BXF3 1484 aa15.27■□□□□ 0.04
CCDC25-207ENST00000520486 RB1CC1Q8TDY2 1594 aa15.19■□□□□ 0.02
CCDC25-207ENST00000520486 TTBK1Q5TCY1 1321 aaPredicted RBP15.18■□□□□ 0.02
CCDC25-207ENST00000520486 PABPN1Q86U42 306 aaKnown RBP eCLIP15.17■□□□□ 0.02
CCDC25-207ENST00000520486 MROH2BQ7Z745 1585 aa15.1■□□□□ 0.01
CCDC25-207ENST00000520486 TRIM26Q12899 539 aaPredicted RBP15.07■□□□□ 0
CCDC25-207ENST00000520486 WIZO95785 1651 aa15□□□□□ -0.01
CCDC25-207ENST00000520486 NACADO15069 1562 aa14.98□□□□□ -0.01
CCDC25-207ENST00000520486 RANGAP1P46060 587 aaPredicted RBP14.89□□□□□ -0.03
CCDC25-207ENST00000520486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.81□□□□□ -0.04
CCDC25-207ENST00000520486 ABCC8Q09428 1581 aa14.8□□□□□ -0.04
CCDC25-207ENST00000520486 UBTFP17480 764 aaKnown RBP14.79□□□□□ -0.04
CCDC25-207ENST00000520486 CCDC88BA6NC98 1476 aa14.73□□□□□ -0.05
CCDC25-207ENST00000520486 BAZ1AQ9NRL2 1556 aaPredicted RBP14.72□□□□□ -0.05
CCDC25-207ENST00000520486 SOGA1O94964 1423 aa14.69□□□□□ -0.06
CCDC25-207ENST00000520486 CCER1Q8TC90 406 aaPredicted RBP14.68□□□□□ -0.06
CCDC25-207ENST00000520486 RUSC2Q8N2Y8 1516 aa14.65□□□□□ -0.06
CCDC25-207ENST00000520486 SMARCA4P51532 1647 aa14.62□□□□□ -0.07
CCDC25-207ENST00000520486 CSRNP3Q8WYN3 585 aa14.6□□□□□ -0.07
CCDC25-207ENST00000520486 UNC13AQ9UPW8 1703 aa14.58□□□□□ -0.08
CCDC25-207ENST00000520486 TOP2AP11388 1531 aaKnown RBP14.57□□□□□ -0.08
CCDC25-207ENST00000520486 SMARCA2P51531 1590 aa14.56□□□□□ -0.08
CCDC25-207ENST00000520486 ZEB1P37275 1124 aaPredicted RBP14.55□□□□□ -0.08
CCDC25-207ENST00000520486 HNRNPUL2Q1KMD3 747 aaKnown RBP14.53□□□□□ -0.08
CCDC25-207ENST00000520486 CEP162Q5TB80 1403 aa14.51□□□□□ -0.09
CCDC25-207ENST00000520486 BICRAQ9NZM4 1560 aa14.48□□□□□ -0.09
CCDC25-207ENST00000520486 EIF4G1Q04637 1599 aaKnown RBP14.45□□□□□ -0.1
CCDC25-207ENST00000520486 WRNQ14191 1432 aaPredicted RBP eCLIP14.45□□□□□ -0.1
CCDC25-207ENST00000520486 BAZ1BQ9UIG0 1483 aaKnown RBP14.38□□□□□ -0.11
CCDC25-207ENST00000520486 ATAD2BQ9ULI0 1458 aa14.37□□□□□ -0.11
CCDC25-207ENST00000520486 APLP2Q06481 763 aa14.37□□□□□ -0.11
CCDC25-207ENST00000520486 TNIKQ9UKE5 1360 aa14.36□□□□□ -0.11
CCDC25-207ENST00000520486 SYNJ1O43426 1573 aa14.31□□□□□ -0.12
CCDC25-207ENST00000520486 ITGAEP38570 1179 aa14.29□□□□□ -0.12
CCDC25-207ENST00000520486 GOLGA3Q08378 1498 aa14.29□□□□□ -0.12
CCDC25-207ENST00000520486 DIEXFQ68CQ4 756 aaKnown RBP14.27□□□□□ -0.13
CCDC25-207ENST00000520486 CLIP1P30622 1438 aa14.27□□□□□ -0.13
CCDC25-207ENST00000520486 YTHDC1Q96MU7 727 aaKnown RBP14.27□□□□□ -0.13
CCDC25-207ENST00000520486 RAPGEF2Q9Y4G8 1499 aa14.26□□□□□ -0.13
CCDC25-207ENST00000520486 SCAF1Q9H7N4 1312 aaKnown RBP14.24□□□□□ -0.13
CCDC25-207ENST00000520486 ATP1B4Q9UN42 357 aaPredicted RBP14.23□□□□□ -0.13
CCDC25-207ENST00000520486 EEA1Q15075 1411 aa14.2□□□□□ -0.14
CCDC25-207ENST00000520486 P3H3Q8IVL6 736 aa14.19□□□□□ -0.14
CCDC25-207ENST00000520486 CEP164Q9UPV0 1460 aa14.18□□□□□ -0.14
CCDC25-207ENST00000520486 KANK4Q5T7N3 995 aaPredicted RBP14.17□□□□□ -0.14
CCDC25-207ENST00000520486 NEUROD1Q13562 356 aa14.16□□□□□ -0.14
CCDC25-207ENST00000520486 PEG3Q9GZU2 1588 aa14.1□□□□□ -0.15
CCDC25-207ENST00000520486 ZNF316A6NFI3 1004 aaPredicted RBP14.07□□□□□ -0.16
CCDC25-207ENST00000520486 VPS8Q8N3P4 1428 aa14.07□□□□□ -0.16
CCDC25-207ENST00000520486 GTF3C3Q9Y5Q9 886 aa14.03□□□□□ -0.16
CCDC25-207ENST00000520486 MIER1Q8N108 512 aa14.03□□□□□ -0.16
CCDC25-207ENST00000520486 KIF21BO75037 1637 aa14.02□□□□□ -0.17
CCDC25-207ENST00000520486 ACIN1Q9UKV3 1341 aaKnown RBP14.02□□□□□ -0.17
CCDC25-207ENST00000520486 CUX1P39880 1505 aa14.01□□□□□ -0.17
CCDC25-207ENST00000520486 DNAJC5BQ9UF47 199 aa14□□□□□ -0.17
CCDC25-207ENST00000520486 KIF27Q86VH2 1401 aa13.98□□□□□ -0.17
CCDC25-207ENST00000520486 TOP2BQ02880 1626 aa13.97□□□□□ -0.17
CCDC25-207ENST00000520486 NCAPD3P42695 1498 aa13.97□□□□□ -0.17
CCDC25-207ENST00000520486 CUX2O14529 1486 aa13.97□□□□□ -0.17
CCDC25-207ENST00000520486 FAM50AQ14320 339 aaKnown RBP13.97□□□□□ -0.17
CCDC25-207ENST00000520486 ARAP1Q96P48 1450 aa13.96□□□□□ -0.17
CCDC25-207ENST00000520486 CENPBP07199 599 aaPredicted RBP13.94□□□□□ -0.18
CCDC25-207ENST00000520486 ARID3CA6NKF2 412 aa13.92□□□□□ -0.18
CCDC25-207ENST00000520486 PRXQ9BXM0 1461 aa13.92□□□□□ -0.18
CCDC25-207ENST00000520486 CFTRP13569 1480 aa13.9□□□□□ -0.18
CCDC25-207ENST00000520486 IGF1RP08069 1367 aa13.89□□□□□ -0.19
CCDC25-207ENST00000520486 CADPSQ9ULU8 1353 aa13.88□□□□□ -0.19
CCDC25-207ENST00000520486 CARMIL1Q5VZK9 1371 aa13.87□□□□□ -0.19
CCDC25-207ENST00000520486 HIRIP3Q9BW71 556 aaPredicted RBP13.87□□□□□ -0.19
CCDC25-207ENST00000520486 NESP48681 1621 aa13.87□□□□□ -0.19
CCDC25-207ENST00000520486 RAD54L2Q9Y4B4 1467 aa13.85□□□□□ -0.19
CCDC25-207ENST00000520486 ARHGAP35Q9NRY4 1499 aa13.84□□□□□ -0.19
CCDC25-207ENST00000520486 FGD5Q6ZNL6 1462 aa13.84□□□□□ -0.19
CCDC25-207ENST00000520486 HMGXB3Q12766 1538 aa13.84□□□□□ -0.19
CCDC25-207ENST00000520486 SIN3AQ96ST3 1273 aa13.83□□□□□ -0.2
CCDC25-207ENST00000520486 DHX57Q6P158 1386 aaKnown RBP13.82□□□□□ -0.2
CCDC25-207ENST00000520486 BIVM-ERCC5R4GMW8 1640 aa13.82□□□□□ -0.2
CCDC25-207ENST00000520486 CCNB3Q8WWL7 1395 aa13.79□□□□□ -0.2
CCDC25-207ENST00000520486 TDRD9Q8NDG6 1382 aaKnown RBP13.79□□□□□ -0.2
CCDC25-207ENST00000520486 CC2D2AQ9P2K1 1620 aa13.78□□□□□ -0.2
CCDC25-207ENST00000520486 FHOD3Q2V2M9 1422 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 288.7 ms