RNA–Protein interactions for RNA: ENST00000520409.5

BNIP3L-204, Transcript of BCL2 interacting protein 3 like, humanhuman

TSL 2 BASIC

Gene BNIP3L, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3L-204ENST00000520409 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.55■□□□□ 0.722e-25■■■■□ 20.3
BNIP3L-204ENST00000520409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.8■■□□□ 1.882e-20■□□□□ 10.7
BNIP3L-204ENST00000520409 EWSR1Q01844 656 aaKnown RBP eCLIP14.39□□□□□ -0.115e-18■■■■■ 66.4
BNIP3L-204ENST00000520409 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.19■■□□□ 1.32e-13■■□□□ 14.3
BNIP3L-204ENST00000520409 SUB1P53999 127 aaKnown RBP eCLIP13.72□□□□□ -0.213e-12■■■■□ 21.6
BNIP3L-204ENST00000520409 ZNF622Q969S3 477 aaKnown RBP eCLIP26.13■■□□□ 1.772e-9■□□□□ 9.6
BNIP3L-204ENST00000520409 YBX3P16989 372 aaKnown RBP eCLIP27.18■■□□□ 1.944e-9■□□□□ 11
BNIP3L-204ENST00000520409 TIA1P31483 386 aaKnown RBP eCLIP17.09■□□□□ 0.337e-9■■■■■ 29.4
BNIP3L-204ENST00000520409 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.41■□□□□ 0.549e-9■■■□□ 16.8
BNIP3L-204ENST00000520409 TRA2AQ13595 282 aaKnown RBP eCLIP19.34■□□□□ 0.691e-8■□□□□ 9.1
BNIP3L-204ENST00000520409 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.43■□□□□ 0.542e-8■■□□□ 12.8
BNIP3L-204ENST00000520409 EFTUD2Q15029 972 aaKnown RBP eCLIP17.76■□□□□ 0.432e-8■■■■■ 41.3
BNIP3L-204ENST00000520409 SF3B1O75533 1304 aaKnown RBP eCLIP21.41■■□□□ 1.025e-8■■■■■ 43.7
BNIP3L-204ENST00000520409 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.57■■□□□ 1.041e-7■■■□□ 19.2
BNIP3L-204ENST00000520409 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.01■□□□□ 0.312e-7■■■■■ 29.8
BNIP3L-204ENST00000520409 GTF2F1P35269 517 aaKnown RBP eCLIP22.24■■□□□ 1.152e-7■■■■■ 41
BNIP3L-204ENST00000520409 PRPF4O43172 522 aaKnown RBP eCLIP18.32■□□□□ 0.522e-7■■■■□ 23.4
BNIP3L-204ENST00000520409 RBFOX2O43251 390 aaKnown RBP eCLIP14.03□□□□□ -0.166e-7■■■■□ 21.9
BNIP3L-204ENST00000520409 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.47■□□□□ 0.551e-6■□□□□ 8.6
BNIP3L-204ENST00000520409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.37■■■□□ 2.451e-6■□□□□ 8.7
BNIP3L-204ENST00000520409 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.61■□□□□ 0.572e-6■■■■■ 54.9
BNIP3L-204ENST00000520409 LARP4Q71RC2 724 aaKnown RBP eCLIP17.31■□□□□ 0.364e-6■■■□□ 17.7
BNIP3L-204ENST00000520409 PPIGQ13427 754 aaKnown RBP eCLIP23.18■■□□□ 1.34e-6■■■■□ 22
BNIP3L-204ENST00000520409 G3BP1Q13283 466 aaKnown RBP eCLIP23.64■■□□□ 1.374e-6■□□□□ 10.5
BNIP3L-204ENST00000520409 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.51■■□□□ 1.196e-6■■■□□ 18.7
BNIP3L-204ENST00000520409 RPS3P23396 243 aaKnown RBP eCLIP18.15■□□□□ 0.56e-6■□□□□ 8.7
BNIP3L-204ENST00000520409 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.08■□□□□ 0.819e-6■■■□□ 15.9
BNIP3L-204ENST00000520409 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.37■□□□□ 0.859e-6■■■□□ 16
Retrieved 28 of 28 RNA–protein pairs in 7.9 ms