RNA–Protein interactions for RNA: ENST00000520300.1

AC008663.3-201, humanhuman

TSL 3 BASIC

Gene AC008663.3, Length 457 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008663.3-201ENST00000520300 NISCHQ9Y2I1 1504 aa23.36■■□□□ 1.33
AC008663.3-201ENST00000520300 CCDC180Q9P1Z9 1646 aa20.82■□□□□ 0.92
AC008663.3-201ENST00000520300 ABCC9O60706 1549 aa20.53■□□□□ 0.88
AC008663.3-201ENST00000520300 RB1CC1Q8TDY2 1594 aa19.76■□□□□ 0.75
AC008663.3-201ENST00000520300 NACADO15069 1562 aa19.71■□□□□ 0.75
AC008663.3-201ENST00000520300 DCAF8L2P0C7V8 631 aa19.69■□□□□ 0.74
AC008663.3-201ENST00000520300 MYO15BQ96JP2 1530 aa19.59■□□□□ 0.73
AC008663.3-201ENST00000520300 DCAF1Q9Y4B6 1507 aa19.4■□□□□ 0.7
AC008663.3-201ENST00000520300 ZCCHC6Q5VYS8 1495 aaKnown RBP19.38■□□□□ 0.69
AC008663.3-201ENST00000520300 PABPN1Q86U42 306 aaKnown RBP eCLIP19.2■□□□□ 0.66
AC008663.3-201ENST00000520300 UNC13AQ9UPW8 1703 aa19.07■□□□□ 0.64
AC008663.3-201ENST00000520300 SHROOM4Q9ULL8 1493 aa19.03■□□□□ 0.64
AC008663.3-201ENST00000520300 BICRAQ9NZM4 1560 aa19.03■□□□□ 0.64
AC008663.3-201ENST00000520300 DNAJC5BQ9UF47 199 aa19.03■□□□□ 0.64
AC008663.3-201ENST00000520300 SCRIBQ14160 1630 aa18.89■□□□□ 0.62
AC008663.3-201ENST00000520300 EIF4G1Q04637 1599 aaKnown RBP18.61■□□□□ 0.57
AC008663.3-201ENST00000520300 CC2D2AQ9P2K1 1620 aa18.56■□□□□ 0.56
AC008663.3-201ENST00000520300 CECR2Q9BXF3 1484 aa18.53■□□□□ 0.56
AC008663.3-201ENST00000520300 NCAPD3P42695 1498 aa18.21■□□□□ 0.51
AC008663.3-201ENST00000520300 BAZ1AQ9NRL2 1556 aaPredicted RBP18.16■□□□□ 0.5
AC008663.3-201ENST00000520300 SMARCA2P51531 1590 aa18.14■□□□□ 0.49
AC008663.3-201ENST00000520300 ATAD2BQ9ULI0 1458 aa18.13■□□□□ 0.49
AC008663.3-201ENST00000520300 SMARCA4P51532 1647 aa18.1■□□□□ 0.49
AC008663.3-201ENST00000520300 HMGXB3Q12766 1538 aa18.04■□□□□ 0.48
AC008663.3-201ENST00000520300 PEG3Q9GZU2 1588 aa18■□□□□ 0.47
AC008663.3-201ENST00000520300 BAZ1BQ9UIG0 1483 aaKnown RBP17.98■□□□□ 0.47
AC008663.3-201ENST00000520300 MROH2BQ7Z745 1585 aa17.93■□□□□ 0.46
AC008663.3-201ENST00000520300 ERCC6Q03468 1493 aa17.81■□□□□ 0.44
AC008663.3-201ENST00000520300 RSF1Q96T23 1441 aaPredicted RBP17.73■□□□□ 0.43
AC008663.3-201ENST00000520300 LAMC3Q9Y6N6 1575 aa17.72■□□□□ 0.43
AC008663.3-201ENST00000520300 CUX2O14529 1486 aa17.71■□□□□ 0.43
AC008663.3-201ENST00000520300 PDS5BQ9NTI5 1447 aa17.71■□□□□ 0.43
AC008663.3-201ENST00000520300 CADPSQ9ULU8 1353 aa17.68■□□□□ 0.42
AC008663.3-201ENST00000520300 WIZO95785 1651 aa17.68■□□□□ 0.42
AC008663.3-201ENST00000520300 NESP48681 1621 aa17.66■□□□□ 0.42
AC008663.3-201ENST00000520300 TOP2AP11388 1531 aaKnown RBP17.57■□□□□ 0.4
AC008663.3-201ENST00000520300 CFTRP13569 1480 aa17.5■□□□□ 0.39
AC008663.3-201ENST00000520300 DNAJC5Q9H3Z4 198 aa17.45■□□□□ 0.38
AC008663.3-201ENST00000520300 MRC2Q9UBG0 1479 aa17.43■□□□□ 0.38
AC008663.3-201ENST00000520300 THOC2Q8NI27 1593 aaKnown RBP17.42■□□□□ 0.38
AC008663.3-201ENST00000520300 FANCD2Q9BXW9 1451 aa17.42■□□□□ 0.38
AC008663.3-201ENST00000520300 CEP164Q9UPV0 1460 aa17.42■□□□□ 0.38
AC008663.3-201ENST00000520300 KIF21AQ7Z4S6 1674 aa17.39■□□□□ 0.37
AC008663.3-201ENST00000520300 CCDC88BA6NC98 1476 aa17.38■□□□□ 0.37
AC008663.3-201ENST00000520300 WDR62O43379 1518 aa17.34■□□□□ 0.37
AC008663.3-201ENST00000520300 ABCC8Q09428 1581 aa17.23■□□□□ 0.35
AC008663.3-201ENST00000520300 PRDM2Q13029 1718 aa17.18■□□□□ 0.34
AC008663.3-201ENST00000520300 URB2Q14146 1524 aaKnown RBP17.18■□□□□ 0.34
AC008663.3-201ENST00000520300 SUPT5HO00267 1087 aaKnown RBP17.16■□□□□ 0.34
AC008663.3-201ENST00000520300 IFT140Q96RY7 1462 aa17.1■□□□□ 0.33
AC008663.3-201ENST00000520300 TOPBP1Q92547 1522 aa17.08■□□□□ 0.32
AC008663.3-201ENST00000520300 DNMBPQ6XZF7 1577 aa17.04■□□□□ 0.32
AC008663.3-201ENST00000520300 OSCARQ8IYS5 282 aa17.04■□□□□ 0.32
AC008663.3-201ENST00000520300 SOGA1O94964 1423 aa16.94■□□□□ 0.3
AC008663.3-201ENST00000520300 POLA1P09884 1462 aaPredicted RBP16.92■□□□□ 0.3
AC008663.3-201ENST00000520300 ZNF608Q9ULD9 1512 aaPredicted RBP16.91■□□□□ 0.3
AC008663.3-201ENST00000520300 TARBP1Q13395 1621 aaKnown RBP16.86■□□□□ 0.29
AC008663.3-201ENST00000520300 AQRO60306 1485 aaKnown RBP eCLIP16.85■□□□□ 0.29
AC008663.3-201ENST00000520300 WDR97A6NE52 1622 aa16.85■□□□□ 0.29
AC008663.3-201ENST00000520300 FGD5Q6ZNL6 1462 aa16.84■□□□□ 0.29
AC008663.3-201ENST00000520300 CUX1P39880 1505 aa16.83■□□□□ 0.28
AC008663.3-201ENST00000520300 TDRD9Q8NDG6 1382 aaKnown RBP16.82■□□□□ 0.28
AC008663.3-201ENST00000520300 EIF4G3O43432 1585 aaKnown RBP16.81■□□□□ 0.28
AC008663.3-201ENST00000520300 RAD54L2Q9Y4B4 1467 aa16.81■□□□□ 0.28
AC008663.3-201ENST00000520300 WRNQ14191 1432 aaPredicted RBP eCLIP16.79■□□□□ 0.28
AC008663.3-201ENST00000520300 FBLN2P98095 1184 aa16.78■□□□□ 0.28
AC008663.3-201ENST00000520300 GRIN2BQ13224 1484 aa16.75■□□□□ 0.27
AC008663.3-201ENST00000520300 CHMP7Q8WUX9 453 aaPredicted RBP16.75■□□□□ 0.27
AC008663.3-201ENST00000520300 MAGI1Q96QZ7 1491 aaPredicted RBP16.73■□□□□ 0.27
AC008663.3-201ENST00000520300 ABCA10Q8WWZ4 1543 aa16.72■□□□□ 0.27
AC008663.3-201ENST00000520300 GAPVD1Q14C86 1478 aa16.71■□□□□ 0.27
AC008663.3-201ENST00000520300 TRIM41Q8WV44 630 aa16.7■□□□□ 0.26
AC008663.3-201ENST00000520300 TOP2BQ02880 1626 aa16.67■□□□□ 0.26
AC008663.3-201ENST00000520300 SNAPC4Q5SXM2 1469 aa16.67■□□□□ 0.26
AC008663.3-201ENST00000520300 SYNJ2O15056 1496 aa16.65■□□□□ 0.26
AC008663.3-201ENST00000520300 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
AC008663.3-201ENST00000520300 ARHGEF11O15085 1522 aa16.59■□□□□ 0.25
AC008663.3-201ENST00000520300 SYNJ1O43426 1573 aa16.59■□□□□ 0.25
AC008663.3-201ENST00000520300 CHD1O14646 1710 aa16.59■□□□□ 0.25
AC008663.3-201ENST00000520300 ABCA5Q8WWZ7 1642 aa16.57■□□□□ 0.24
AC008663.3-201ENST00000520300 CYB5RLQ6IPT4 315 aa16.55■□□□□ 0.24
AC008663.3-201ENST00000520300 RIMBP3CA6NJZ7 1639 aa16.55■□□□□ 0.24
AC008663.3-201ENST00000520300 RIMBP3BA6NNM3 1639 aa16.55■□□□□ 0.24
AC008663.3-201ENST00000520300 RIMBP3Q9UFD9 1639 aa16.55■□□□□ 0.24
AC008663.3-201ENST00000520300 FHAD1B1AJZ9 1412 aa16.54■□□□□ 0.24
AC008663.3-201ENST00000520300 ERICH3Q5RHP9 1530 aa16.54■□□□□ 0.24
AC008663.3-201ENST00000520300 PBRM1Q86U86 1689 aa16.53■□□□□ 0.24
AC008663.3-201ENST00000520300 GRIN2AQ12879 1464 aa16.49■□□□□ 0.23
AC008663.3-201ENST00000520300 CLASP1Q7Z460 1538 aa16.49■□□□□ 0.23
AC008663.3-201ENST00000520300 KIF27Q86VH2 1401 aa16.48■□□□□ 0.23
AC008663.3-201ENST00000520300 NUP160Q12769 1436 aa16.44■□□□□ 0.22
AC008663.3-201ENST00000520300 ADAMTS12P58397 1594 aa16.43■□□□□ 0.22
AC008663.3-201ENST00000520300 ARAP1Q96P48 1450 aa16.41■□□□□ 0.22
AC008663.3-201ENST00000520300 IGF1RP08069 1367 aa16.4■□□□□ 0.22
AC008663.3-201ENST00000520300 JPH4Q96JJ6 628 aa16.37■□□□□ 0.21
AC008663.3-201ENST00000520300 CEP170Q5SW79 1584 aa16.32■□□□□ 0.2
AC008663.3-201ENST00000520300 CARMIL1Q5VZK9 1371 aa16.32■□□□□ 0.2
AC008663.3-201ENST00000520300 TRHP20396 242 aaPredicted RBP16.31■□□□□ 0.2
AC008663.3-201ENST00000520300 CUL7Q14999 1698 aa16.3■□□□□ 0.2
AC008663.3-201ENST00000520300 KIAA0586Q9BVV6 1533 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms