RNA–Protein interactions for RNA: ENST00000520258.1

GPAT4-206, Transcript of glycerol-3-phosphate acyltransferase 4, humanhuman

TSL 2

Gene GPAT4, Length 870 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAT4-206ENST00000520258 NISCHQ9Y2I1 1504 aa53.39■■■■■ 6.14
GPAT4-206ENST00000520258 CCDC180Q9P1Z9 1646 aa47.41■■■■■ 5.18
GPAT4-206ENST00000520258 ABCC9O60706 1549 aa45.56■■■■■ 4.88
GPAT4-206ENST00000520258 ZCCHC6Q5VYS8 1495 aaKnown RBP44.62■■■■■ 4.73
GPAT4-206ENST00000520258 NACADO15069 1562 aa44.31■■■■■ 4.68
GPAT4-206ENST00000520258 DCAF1Q9Y4B6 1507 aa44.28■■■■■ 4.68
GPAT4-206ENST00000520258 MYO15BQ96JP2 1530 aa44.24■■■■■ 4.67
GPAT4-206ENST00000520258 RB1CC1Q8TDY2 1594 aa44.22■■■■■ 4.67
GPAT4-206ENST00000520258 DCAF8L2P0C7V8 631 aa44.1■■■■■ 4.65
GPAT4-206ENST00000520258 UNC13AQ9UPW8 1703 aa43.42■■■■■ 4.54
GPAT4-206ENST00000520258 SCRIBQ14160 1630 aa43.15■■■■■ 4.5
GPAT4-206ENST00000520258 BICRAQ9NZM4 1560 aa42.86■■■■■ 4.45
GPAT4-206ENST00000520258 PABPN1Q86U42 306 aaKnown RBP eCLIP42.54■■■■■ 4.4
GPAT4-206ENST00000520258 SHROOM4Q9ULL8 1493 aa42.49■■■■■ 4.39
GPAT4-206ENST00000520258 EIF4G1Q04637 1599 aaKnown RBP41.66■■■■■ 4.26
GPAT4-206ENST00000520258 CECR2Q9BXF3 1484 aa41.45■■■■■ 4.23
GPAT4-206ENST00000520258 BAZ1AQ9NRL2 1556 aaPredicted RBP41.37■■■■■ 4.21
GPAT4-206ENST00000520258 SMARCA4P51532 1647 aa41.37■■■■■ 4.21
GPAT4-206ENST00000520258 CC2D2AQ9P2K1 1620 aa41.36■■■■■ 4.21
GPAT4-206ENST00000520258 DNAJC5BQ9UF47 199 aa41.17■■■■■ 4.18
GPAT4-206ENST00000520258 MROH2BQ7Z745 1585 aa41.13■■■■■ 4.18
GPAT4-206ENST00000520258 PEG3Q9GZU2 1588 aa40.99■■■■■ 4.15
GPAT4-206ENST00000520258 SMARCA2P51531 1590 aa40.95■■■■■ 4.15
GPAT4-206ENST00000520258 ATAD2BQ9ULI0 1458 aa40.9■■■■■ 4.14
GPAT4-206ENST00000520258 RSF1Q96T23 1441 aaPredicted RBP40.82■■■■■ 4.12
GPAT4-206ENST00000520258 WIZO95785 1651 aa40.8■■■■■ 4.12
GPAT4-206ENST00000520258 NCAPD3P42695 1498 aa40.79■■■■■ 4.12
GPAT4-206ENST00000520258 HMGXB3Q12766 1538 aa40.75■■■■■ 4.11
GPAT4-206ENST00000520258 BAZ1BQ9UIG0 1483 aaKnown RBP40.61■■■■■ 4.09
GPAT4-206ENST00000520258 TOP2AP11388 1531 aaKnown RBP40.38■■■■■ 4.06
GPAT4-206ENST00000520258 SUPT5HO00267 1087 aaKnown RBP40.07■■■■■ 4.01
GPAT4-206ENST00000520258 CCDC88BA6NC98 1476 aa39.81■■■■□ 3.96
GPAT4-206ENST00000520258 LAMC3Q9Y6N6 1575 aa39.73■■■■□ 3.95
GPAT4-206ENST00000520258 NESP48681 1621 aa39.61■■■■□ 3.93
GPAT4-206ENST00000520258 PRDM2Q13029 1718 aa39.6■■■■□ 3.93
GPAT4-206ENST00000520258 CADPSQ9ULU8 1353 aa39.58■■■■□ 3.93
GPAT4-206ENST00000520258 CFTRP13569 1480 aa39.53■■■■□ 3.92
GPAT4-206ENST00000520258 KIF21AQ7Z4S6 1674 aa39.36■■■■□ 3.89
GPAT4-206ENST00000520258 PDS5BQ9NTI5 1447 aa39.31■■■■□ 3.88
GPAT4-206ENST00000520258 ERCC6Q03468 1493 aa39.23■■■■□ 3.87
GPAT4-206ENST00000520258 FANCD2Q9BXW9 1451 aa39.17■■■■□ 3.86
GPAT4-206ENST00000520258 CEP164Q9UPV0 1460 aa39.1■■■■□ 3.85
GPAT4-206ENST00000520258 THOC2Q8NI27 1593 aaKnown RBP39.04■■■■□ 3.84
GPAT4-206ENST00000520258 MRC2Q9UBG0 1479 aa38.92■■■■□ 3.82
GPAT4-206ENST00000520258 WDR62O43379 1518 aa38.83■■■■□ 3.81
GPAT4-206ENST00000520258 URB2Q14146 1524 aaKnown RBP38.77■■■■□ 3.8
GPAT4-206ENST00000520258 DNMBPQ6XZF7 1577 aa38.71■■■■□ 3.79
GPAT4-206ENST00000520258 ABCC8Q09428 1581 aa38.7■■■■□ 3.79
GPAT4-206ENST00000520258 CUX2O14529 1486 aa38.68■■■■□ 3.78
GPAT4-206ENST00000520258 TOPBP1Q92547 1522 aa38.64■■■■□ 3.78
GPAT4-206ENST00000520258 CUX1P39880 1505 aa38.58■■■■□ 3.77
GPAT4-206ENST00000520258 BIVM-ERCC5R4GMW8 1640 aa38.52■■■■□ 3.76
GPAT4-206ENST00000520258 WRNQ14191 1432 aaPredicted RBP eCLIP38.48■■■■□ 3.75
GPAT4-206ENST00000520258 TOP2BQ02880 1626 aa38.46■■■■□ 3.75
GPAT4-206ENST00000520258 SYNJ1O43426 1573 aa38.45■■■■□ 3.75
GPAT4-206ENST00000520258 POLA1P09884 1462 aaPredicted RBP38.34■■■■□ 3.73
GPAT4-206ENST00000520258 FGD5Q6ZNL6 1462 aa38.33■■■■□ 3.73
GPAT4-206ENST00000520258 TARBP1Q13395 1621 aaKnown RBP38.26■■■■□ 3.71
GPAT4-206ENST00000520258 IFT140Q96RY7 1462 aa38.24■■■■□ 3.71
GPAT4-206ENST00000520258 WDR97A6NE52 1622 aa38.19■■■■□ 3.7
GPAT4-206ENST00000520258 SOGA1O94964 1423 aa38.12■■■■□ 3.69
GPAT4-206ENST00000520258 RAD54L2Q9Y4B4 1467 aa38.11■■■■□ 3.69
GPAT4-206ENST00000520258 ABCA10Q8WWZ4 1543 aa38.01■■■■□ 3.67
GPAT4-206ENST00000520258 EIF4G3O43432 1585 aaKnown RBP38■■■■□ 3.67
GPAT4-206ENST00000520258 ZNF608Q9ULD9 1512 aaPredicted RBP37.98■■■■□ 3.67
GPAT4-206ENST00000520258 ABCA5Q8WWZ7 1642 aa37.9■■■■□ 3.66
GPAT4-206ENST00000520258 TRIM41Q8WV44 630 aa37.86■■■■□ 3.65
GPAT4-206ENST00000520258 PBRM1Q86U86 1689 aa37.84■■■■□ 3.65
GPAT4-206ENST00000520258 AQRO60306 1485 aaKnown RBP eCLIP37.8■■■■□ 3.64
GPAT4-206ENST00000520258 CHIC1Q5VXU3 224 aa37.79■■■■□ 3.64
GPAT4-206ENST00000520258 TDRD9Q8NDG6 1382 aaKnown RBP37.79■■■■□ 3.64
GPAT4-206ENST00000520258 GAPVD1Q14C86 1478 aa37.75■■■■□ 3.63
GPAT4-206ENST00000520258 GRIN2BQ13224 1484 aa37.67■■■■□ 3.62
GPAT4-206ENST00000520258 KIF27Q86VH2 1401 aa37.63■■■■□ 3.61
GPAT4-206ENST00000520258 ERICH3Q5RHP9 1530 aa37.61■■■■□ 3.61
GPAT4-206ENST00000520258 MAGI1Q96QZ7 1491 aaPredicted RBP37.55■■■■□ 3.6
GPAT4-206ENST00000520258 SNAPC4Q5SXM2 1469 aa37.53■■■■□ 3.6
GPAT4-206ENST00000520258 CHD1O14646 1710 aa37.48■■■■□ 3.59
GPAT4-206ENST00000520258 ADAMTS12P58397 1594 aa37.47■■■■□ 3.59
GPAT4-206ENST00000520258 CUL7Q14999 1698 aa37.46■■■■□ 3.59
GPAT4-206ENST00000520258 RUSC2Q8N2Y8 1516 aa37.45■■■■□ 3.59
GPAT4-206ENST00000520258 SYNJ2O15056 1496 aa37.37■■■■□ 3.57
GPAT4-206ENST00000520258 IGF1RP08069 1367 aa37.35■■■■□ 3.57
GPAT4-206ENST00000520258 EEA1Q15075 1411 aa37.35■■■■□ 3.57
GPAT4-206ENST00000520258 FHAD1B1AJZ9 1412 aa37.32■■■■□ 3.56
GPAT4-206ENST00000520258 GRIN2AQ12879 1464 aa37.2■■■■□ 3.55
GPAT4-206ENST00000520258 CHMP7Q8WUX9 453 aaPredicted RBP37.17■■■■□ 3.54
GPAT4-206ENST00000520258 CARMIL1Q5VZK9 1371 aa37.16■■■■□ 3.54
GPAT4-206ENST00000520258 FBLN2P98095 1184 aa37.13■■■■□ 3.53
GPAT4-206ENST00000520258 PRXQ9BXM0 1461 aa37.08■■■■□ 3.53
GPAT4-206ENST00000520258 CSRNP3Q8WYN3 585 aa37.08■■■■□ 3.53
GPAT4-206ENST00000520258 RAPGEF2Q9Y4G8 1499 aa37.07■■■■□ 3.52
GPAT4-206ENST00000520258 CEP170Q5SW79 1584 aa37.04■■■■□ 3.52
GPAT4-206ENST00000520258 OSCARQ8IYS5 282 aa37.03■■■■□ 3.52
GPAT4-206ENST00000520258 KIF21BO75037 1637 aa37.01■■■■□ 3.52
GPAT4-206ENST00000520258 NUP160Q12769 1436 aa37.01■■■■□ 3.51
GPAT4-206ENST00000520258 FAM9AQ8IZU1 332 aaPredicted RBP37■■■■□ 3.51
GPAT4-206ENST00000520258 CLASP1Q7Z460 1538 aa36.99■■■■□ 3.51
GPAT4-206ENST00000520258 CTTNBP2Q8WZ74 1663 aa36.92■■■■□ 3.5
GPAT4-206ENST00000520258 SHROOM2Q13796 1616 aa36.78■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms