RNA–Protein interactions for RNA: ENST00000520202.5

CCDC25-206, Transcript of coiled-coil domain containing 25, humanhuman

TSL 1 (best)

Gene CCDC25, Length 1,734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-206ENST00000520202 NISCHQ9Y2I1 1504 aa29.37■■■□□ 2.29
CCDC25-206ENST00000520202 CCDC180Q9P1Z9 1646 aa25.59■■□□□ 1.69
CCDC25-206ENST00000520202 ZCCHC6Q5VYS8 1495 aaKnown RBP24.71■■□□□ 1.55
CCDC25-206ENST00000520202 DCAF1Q9Y4B6 1507 aa24.35■■□□□ 1.49
CCDC25-206ENST00000520202 DCAF8L2P0C7V8 631 aa24.17■■□□□ 1.46
CCDC25-206ENST00000520202 MYO15BQ96JP2 1530 aa24.03■■□□□ 1.44
CCDC25-206ENST00000520202 SHROOM4Q9ULL8 1493 aa24■■□□□ 1.43
CCDC25-206ENST00000520202 ABCC9O60706 1549 aa23.94■■□□□ 1.42
CCDC25-206ENST00000520202 NACADO15069 1562 aa23.8■■□□□ 1.4
CCDC25-206ENST00000520202 RB1CC1Q8TDY2 1594 aa23.54■■□□□ 1.36
CCDC25-206ENST00000520202 SCRIBQ14160 1630 aa23.47■■□□□ 1.35
CCDC25-206ENST00000520202 SUPT5HO00267 1087 aaKnown RBP23.22■■□□□ 1.31
CCDC25-206ENST00000520202 UNC13AQ9UPW8 1703 aa22.98■■□□□ 1.27
CCDC25-206ENST00000520202 RSF1Q96T23 1441 aaPredicted RBP22.84■■□□□ 1.25
CCDC25-206ENST00000520202 CECR2Q9BXF3 1484 aa22.74■■□□□ 1.23
CCDC25-206ENST00000520202 BICRAQ9NZM4 1560 aa22.74■■□□□ 1.23
CCDC25-206ENST00000520202 BAZ1AQ9NRL2 1556 aaPredicted RBP22.71■■□□□ 1.23
CCDC25-206ENST00000520202 MROH2BQ7Z745 1585 aa22.66■■□□□ 1.22
CCDC25-206ENST00000520202 PABPN1Q86U42 306 aaKnown RBP eCLIP22.59■■□□□ 1.21
CCDC25-206ENST00000520202 AEBP2Q6ZN18 517 aaPredicted RBP22.57■■□□□ 1.2
CCDC25-206ENST00000520202 SMARCA4P51532 1647 aa22.55■■□□□ 1.2
CCDC25-206ENST00000520202 WIZO95785 1651 aa22.48■■□□□ 1.19
CCDC25-206ENST00000520202 CHIC1Q5VXU3 224 aa22.32■■□□□ 1.16
CCDC25-206ENST00000520202 TOP2AP11388 1531 aaKnown RBP22.31■■□□□ 1.16
CCDC25-206ENST00000520202 PEG3Q9GZU2 1588 aa22.29■■□□□ 1.16
CCDC25-206ENST00000520202 SMARCA2P51531 1590 aa22.19■■□□□ 1.14
CCDC25-206ENST00000520202 ATAD2BQ9ULI0 1458 aa22.12■■□□□ 1.13
CCDC25-206ENST00000520202 EIF4G1Q04637 1599 aaKnown RBP22.08■■□□□ 1.13
CCDC25-206ENST00000520202 CCDC88BA6NC98 1476 aa22.05■■□□□ 1.12
CCDC25-206ENST00000520202 BAZ1BQ9UIG0 1483 aaKnown RBP22.04■■□□□ 1.12
CCDC25-206ENST00000520202 HMGXB3Q12766 1538 aa21.94■■□□□ 1.1
CCDC25-206ENST00000520202 NCAPD3P42695 1498 aa21.93■■□□□ 1.1
CCDC25-206ENST00000520202 TRIM41Q8WV44 630 aa21.88■■□□□ 1.09
CCDC25-206ENST00000520202 CC2D2AQ9P2K1 1620 aa21.7■■□□□ 1.06
CCDC25-206ENST00000520202 ABCC8Q09428 1581 aa21.61■■□□□ 1.05
CCDC25-206ENST00000520202 WRNQ14191 1432 aaPredicted RBP eCLIP21.53■■□□□ 1.04
CCDC25-206ENST00000520202 CFTRP13569 1480 aa21.49■■□□□ 1.03
CCDC25-206ENST00000520202 LOC105371045A0A1W2PR82 267 aa21.42■■□□□ 1.02
CCDC25-206ENST00000520202 PRDM2Q13029 1718 aa21.41■■□□□ 1.02
CCDC25-206ENST00000520202 FAM9AQ8IZU1 332 aaPredicted RBP21.4■■□□□ 1.02
CCDC25-206ENST00000520202 EEA1Q15075 1411 aa21.39■■□□□ 1.02
CCDC25-206ENST00000520202 CADPSQ9ULU8 1353 aa21.38■■□□□ 1.01
CCDC25-206ENST00000520202 SYNJ1O43426 1573 aa21.37■■□□□ 1.01
CCDC25-206ENST00000520202 TOP2BQ02880 1626 aa21.33■■□□□ 1.01
CCDC25-206ENST00000520202 BIVM-ERCC5R4GMW8 1640 aa21.31■■□□□ 1
CCDC25-206ENST00000520202 SOGA1O94964 1423 aa21.24■□□□□ 0.99
CCDC25-206ENST00000520202 CUX1P39880 1505 aa21.19■□□□□ 0.98
CCDC25-206ENST00000520202 LAMC3Q9Y6N6 1575 aa21.18■□□□□ 0.98
CCDC25-206ENST00000520202 CSRNP3Q8WYN3 585 aa21.18■□□□□ 0.98
CCDC25-206ENST00000520202 FANCD2Q9BXW9 1451 aa21.14■□□□□ 0.97
CCDC25-206ENST00000520202 RUSC2Q8N2Y8 1516 aa21.12■□□□□ 0.97
CCDC25-206ENST00000520202 GOLGA3Q08378 1498 aa21.05■□□□□ 0.96
CCDC25-206ENST00000520202 KIF21BO75037 1637 aa21.05■□□□□ 0.96
CCDC25-206ENST00000520202 NESP48681 1621 aa21.05■□□□□ 0.96
CCDC25-206ENST00000520202 CEP164Q9UPV0 1460 aa21.05■□□□□ 0.96
CCDC25-206ENST00000520202 EHMT2Q96KQ7 1210 aa21.04■□□□□ 0.96
CCDC25-206ENST00000520202 PDS5BQ9NTI5 1447 aa21.02■□□□□ 0.96
CCDC25-206ENST00000520202 TNIKQ9UKE5 1360 aa21.01■□□□□ 0.95
CCDC25-206ENST00000520202 KIF27Q86VH2 1401 aa21■□□□□ 0.95
CCDC25-206ENST00000520202 DNMBPQ6XZF7 1577 aa21■□□□□ 0.95
CCDC25-206ENST00000520202 FGD5Q6ZNL6 1462 aa20.95■□□□□ 0.94
CCDC25-206ENST00000520202 UBTFP17480 764 aaKnown RBP20.93■□□□□ 0.94
CCDC25-206ENST00000520202 DNAJC5BQ9UF47 199 aa20.92■□□□□ 0.94
CCDC25-206ENST00000520202 TOPBP1Q92547 1522 aa20.92■□□□□ 0.94
CCDC25-206ENST00000520202 ERICH3Q5RHP9 1530 aa20.89■□□□□ 0.93
CCDC25-206ENST00000520202 CEP162Q5TB80 1403 aa20.88■□□□□ 0.93
CCDC25-206ENST00000520202 CUX2O14529 1486 aa20.86■□□□□ 0.93
CCDC25-206ENST00000520202 PRXQ9BXM0 1461 aa20.85■□□□□ 0.93
CCDC25-206ENST00000520202 KIF21AQ7Z4S6 1674 aa20.83■□□□□ 0.92
CCDC25-206ENST00000520202 URB2Q14146 1524 aaKnown RBP20.83■□□□□ 0.92
CCDC25-206ENST00000520202 RAPGEF2Q9Y4G8 1499 aa20.82■□□□□ 0.92
CCDC25-206ENST00000520202 POLA1P09884 1462 aaPredicted RBP20.82■□□□□ 0.92
CCDC25-206ENST00000520202 ABCA10Q8WWZ4 1543 aa20.79■□□□□ 0.92
CCDC25-206ENST00000520202 IGF1RP08069 1367 aa20.73■□□□□ 0.91
CCDC25-206ENST00000520202 MRC2Q9UBG0 1479 aa20.72■□□□□ 0.91
CCDC25-206ENST00000520202 TRIM26Q12899 539 aaPredicted RBP20.72■□□□□ 0.91
CCDC25-206ENST00000520202 RAD54L2Q9Y4B4 1467 aa20.71■□□□□ 0.91
CCDC25-206ENST00000520202 CLIP1P30622 1438 aa20.7■□□□□ 0.9
CCDC25-206ENST00000520202 WDR97A6NE52 1622 aa20.68■□□□□ 0.9
CCDC25-206ENST00000520202 PCGF6Q9BYE7 350 aa20.67■□□□□ 0.9
CCDC25-206ENST00000520202 CARMIL1Q5VZK9 1371 aa20.66■□□□□ 0.9
CCDC25-206ENST00000520202 CUL7Q14999 1698 aa20.63■□□□□ 0.89
CCDC25-206ENST00000520202 WDR62O43379 1518 aa20.6■□□□□ 0.89
CCDC25-206ENST00000520202 ABCA5Q8WWZ7 1642 aa20.59■□□□□ 0.89
CCDC25-206ENST00000520202 ERCC6Q03468 1493 aa20.59■□□□□ 0.89
CCDC25-206ENST00000520202 TARBP1Q13395 1621 aaKnown RBP20.58■□□□□ 0.88
CCDC25-206ENST00000520202 GAPVD1Q14C86 1478 aa20.56■□□□□ 0.88
CCDC25-206ENST00000520202 VPS8Q8N3P4 1428 aa20.55■□□□□ 0.88
CCDC25-206ENST00000520202 TDRD9Q8NDG6 1382 aaKnown RBP20.52■□□□□ 0.88
CCDC25-206ENST00000520202 IFT140Q96RY7 1462 aa20.51■□□□□ 0.87
CCDC25-206ENST00000520202 THOC2Q8NI27 1593 aaKnown RBP20.45■□□□□ 0.86
CCDC25-206ENST00000520202 RANGAP1P46060 587 aaPredicted RBP20.44■□□□□ 0.86
CCDC25-206ENST00000520202 ARAP1Q96P48 1450 aa20.43■□□□□ 0.86
CCDC25-206ENST00000520202 APLP2Q06481 763 aa20.42■□□□□ 0.86
CCDC25-206ENST00000520202 PBRM1Q86U86 1689 aa20.42■□□□□ 0.86
CCDC25-206ENST00000520202 ARHGAP35Q9NRY4 1499 aa20.39■□□□□ 0.86
CCDC25-206ENST00000520202 CTTNBP2Q8WZ74 1663 aa20.39■□□□□ 0.85
CCDC25-206ENST00000520202 GRIN2BQ13224 1484 aa20.39■□□□□ 0.85
CCDC25-206ENST00000520202 PPARGC1BQ86YN6 1023 aaKnown RBP20.37■□□□□ 0.85
CCDC25-206ENST00000520202 FHAD1B1AJZ9 1412 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms