RNA–Protein interactions for RNA: ENST00000519618.1

CHRAC1-204, Transcript of chromatin accessibility complex subunit 1, humanhuman

TSL 3

Gene CHRAC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1-204ENST00000519618 AEBP2Q6ZN18 517 aaPredicted RBP25.44■■□□□ 1.66
CHRAC1-204ENST00000519618 CHIC1Q5VXU3 224 aa23.81■■□□□ 1.4
CHRAC1-204ENST00000519618 SENP3Q9H4L4 574 aaPredicted RBP21.83■■□□□ 1.09
CHRAC1-204ENST00000519618 PHF23Q9BUL5 403 aaPredicted RBP21.44■■□□□ 1.02
CHRAC1-204ENST00000519618 FOXD1Q16676 465 aa20.35■□□□□ 0.85
CHRAC1-204ENST00000519618 POTEDQ86YR6 584 aa19.56■□□□□ 0.72
CHRAC1-204ENST00000519618 MSH5O43196 834 aa19.29■□□□□ 0.68
CHRAC1-204ENST00000519618 PLPPR3Q6T4P5 718 aa19.15■□□□□ 0.66
CHRAC1-204ENST00000519618 PIAS4Q8N2W9 510 aaPredicted RBP18.87■□□□□ 0.61
CHRAC1-204ENST00000519618 PPP6R1Q9UPN7 881 aa18.65■□□□□ 0.58
CHRAC1-204ENST00000519618 ADRA2BP18089 450 aa18.53■□□□□ 0.56
CHRAC1-204ENST00000519618 DMRT2Q9Y5R5 561 aa17.24■□□□□ 0.35
CHRAC1-204ENST00000519618 MAPK8IP2Q13387 824 aaPredicted RBP17.15■□□□□ 0.34
CHRAC1-204ENST00000519618 SCAF1Q9H7N4 1312 aaKnown RBP17.05■□□□□ 0.32
CHRAC1-204ENST00000519618 PPP4R3CPQ6ZMV5 832 aa16.78■□□□□ 0.28
CHRAC1-204ENST00000519618 CACNB1Q02641 598 aaPredicted RBP16.75■□□□□ 0.27
CHRAC1-204ENST00000519618 HOXD11P31277 338 aaPredicted RBP16.45■□□□□ 0.22
CHRAC1-204ENST00000519618 CNKSR2Q8WXI2 1034 aa16.45■□□□□ 0.22
CHRAC1-204ENST00000519618 RNF39Q9H2S5 420 aa16.41■□□□□ 0.22
CHRAC1-204ENST00000519618 DCAF8L1A6NGE4 600 aa16.39■□□□□ 0.21
CHRAC1-204ENST00000519618 NCBP3Q53F19 620 aaKnown RBP16.27■□□□□ 0.2
CHRAC1-204ENST00000519618 RNF216Q9NWF9 866 aaPredicted RBP16.24■□□□□ 0.19
CHRAC1-204ENST00000519618 C1QBPQ07021 282 aaKnown RBP16.17■□□□□ 0.18
CHRAC1-204ENST00000519618 DNAJC5BQ9UF47 199 aa16.1■□□□□ 0.17
CHRAC1-204ENST00000519618 NPM3O75607 178 aaKnown RBP15.97■□□□□ 0.15
CHRAC1-204ENST00000519618 KCNA4P22459 653 aa15.88■□□□□ 0.13
CHRAC1-204ENST00000519618 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.57■□□□□ 0.08
CHRAC1-204ENST00000519618 POTEHQ6S545 545 aa15.24■□□□□ 0.03
CHRAC1-204ENST00000519618 U3KPZ7 1027 aaPredicted RBP15.22■□□□□ 0.03
CHRAC1-204ENST00000519618 SLC4A2P04920 1241 aa15.19■□□□□ 0.02
CHRAC1-204ENST00000519618 DSG3P32926 999 aa15.18■□□□□ 0.02
CHRAC1-204ENST00000519618 SPINK5Q9NQ38 1064 aaPredicted RBP15.1■□□□□ 0.01
CHRAC1-204ENST00000519618 CAPN15O75808 1086 aa15.08■□□□□ 0
CHRAC1-204ENST00000519618 SLC4A1APQ9BWU0 796 aaKnown RBP15.07■□□□□ 0
CHRAC1-204ENST00000519618 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.92□□□□□ -0.02
CHRAC1-204ENST00000519618 HNRNPUL2Q1KMD3 747 aaKnown RBP14.92□□□□□ -0.02
CHRAC1-204ENST00000519618 APLP2Q06481 763 aa14.86□□□□□ -0.03
CHRAC1-204ENST00000519618 SAMD1Q6SPF0 538 aaPredicted RBP14.82□□□□□ -0.04
CHRAC1-204ENST00000519618 MYCNP04198 464 aaPredicted RBP14.81□□□□□ -0.04
CHRAC1-204ENST00000519618 FOXD4L1Q9NU39 408 aa14.8□□□□□ -0.04
CHRAC1-204ENST00000519618 ZNF219Q9P2Y4 722 aaPredicted RBP14.77□□□□□ -0.05
CHRAC1-204ENST00000519618 TRHP20396 242 aaPredicted RBP14.7□□□□□ -0.06
CHRAC1-204ENST00000519618 ABCB7O75027 752 aa14.65□□□□□ -0.06
CHRAC1-204ENST00000519618 ZBTB22O15209 634 aa14.6□□□□□ -0.07
CHRAC1-204ENST00000519618 RBM42Q9BTD8 480 aaKnown RBP14.53□□□□□ -0.08
CHRAC1-204ENST00000519618 ATXN8OSP0DMR3 200 aa14.42□□□□□ -0.1
CHRAC1-204ENST00000519618 CHRDL2Q6WN34 429 aa14.36□□□□□ -0.11
CHRAC1-204ENST00000519618 ATF5Q9Y2D1 282 aaPredicted RBP14.35□□□□□ -0.11
CHRAC1-204ENST00000519618 POLA2Q14181 598 aa14.3□□□□□ -0.12
CHRAC1-204ENST00000519618 CSRNP3Q8WYN3 585 aa14.23□□□□□ -0.13
CHRAC1-204ENST00000519618 ZBTB12Q9Y330 459 aaPredicted RBP14.12□□□□□ -0.15
CHRAC1-204ENST00000519618 AKT1S1Q96B36 256 aa14.1□□□□□ -0.15
CHRAC1-204ENST00000519618 SP7Q8TDD2 431 aaPredicted RBP14.08□□□□□ -0.16
CHRAC1-204ENST00000519618 EHMT2Q96KQ7 1210 aa14.06□□□□□ -0.16
CHRAC1-204ENST00000519618 REM2Q8IYK8 340 aaPredicted RBP13.92□□□□□ -0.18
CHRAC1-204ENST00000519618 PIP4P2Q8N4L2 257 aa13.91□□□□□ -0.18
CHRAC1-204ENST00000519618 FBLN2P98095 1184 aa13.84□□□□□ -0.19
CHRAC1-204ENST00000519618 FXR2P51116 673 aaKnown RBP eCLIP13.8□□□□□ -0.2
CHRAC1-204ENST00000519618 OSCARQ8IYS5 282 aa13.79□□□□□ -0.2
CHRAC1-204ENST00000519618 PITPNM1O00562 1244 aa13.76□□□□□ -0.21
CHRAC1-204ENST00000519618 MKRN4PQ13434 485 aaPredicted RBP13.74□□□□□ -0.21
CHRAC1-204ENST00000519618 HAX1O00165 279 aa13.73□□□□□ -0.21
CHRAC1-204ENST00000519618 SPDYE2BA6NHP3 402 aa13.7□□□□□ -0.22
CHRAC1-204ENST00000519618 SPDYE6P0CI01 402 aa13.7□□□□□ -0.22
CHRAC1-204ENST00000519618 SPDYE2Q495Y8 402 aa13.7□□□□□ -0.22
CHRAC1-204ENST00000519618 EVX2Q03828 476 aa13.54□□□□□ -0.24
CHRAC1-204ENST00000519618 SSUH2Q9Y2M2 353 aa13.54□□□□□ -0.24
CHRAC1-204ENST00000519618 ZNF692Q9BU19 519 aaPredicted RBP13.51□□□□□ -0.25
CHRAC1-204ENST00000519618 SPDYE1Q8NFV5 336 aaPredicted RBP13.39□□□□□ -0.27
CHRAC1-204ENST00000519618 PRKAR2AP13861 404 aaKnown RBP13.38□□□□□ -0.27
CHRAC1-204ENST00000519618 C19orf67A6NJJ6 358 aa13.36□□□□□ -0.27
CHRAC1-204ENST00000519618 PABPN1Q86U42 306 aaKnown RBP eCLIP13.31□□□□□ -0.28
CHRAC1-204ENST00000519618 CLEC11AQ9Y240 323 aa13.28□□□□□ -0.28
CHRAC1-204ENST00000519618 SPDYE4A6NLX3 237 aa13.25□□□□□ -0.29
CHRAC1-204ENST00000519618 GABBR2O75899 941 aa13.24□□□□□ -0.29
CHRAC1-204ENST00000519618 LHX8Q68G74 356 aa13.18□□□□□ -0.3
CHRAC1-204ENST00000519618 PRR29P0C7W0 189 aa13.11□□□□□ -0.31
CHRAC1-204ENST00000519618 STAG3Q9UJ98 1225 aa13.11□□□□□ -0.31
CHRAC1-204ENST00000519618 CHADLQ6NUI6 762 aa13.08□□□□□ -0.32
CHRAC1-204ENST00000519618 PROM2Q8N271 834 aa13.08□□□□□ -0.32
CHRAC1-204ENST00000519618 CLCN6P51797 869 aa13.02□□□□□ -0.33
CHRAC1-204ENST00000519618 POTEIP0CG38 1075 aa12.96□□□□□ -0.33
CHRAC1-204ENST00000519618 CD44P16070 742 aaKnown RBP12.93□□□□□ -0.34
CHRAC1-204ENST00000519618 FARP1Q9Y4F1 1045 aaPredicted RBP12.92□□□□□ -0.34
CHRAC1-204ENST00000519618 CREBZFQ9NS37 354 aa12.86□□□□□ -0.35
CHRAC1-204ENST00000519618 FKBP8Q14318 412 aa12.83□□□□□ -0.36
CHRAC1-204ENST00000519618 ZNF579Q8NAF0 562 aaKnown RBP12.78□□□□□ -0.36
CHRAC1-204ENST00000519618 DCBLD2Q96PD2 775 aa12.76□□□□□ -0.37
CHRAC1-204ENST00000519618 MNX1P50219 401 aaPredicted RBP12.71□□□□□ -0.37
CHRAC1-204ENST00000519618 NPM1P06748 294 aaKnown RBP eCLIP12.68□□□□□ -0.38
CHRAC1-204ENST00000519618 ZRANB1Q9UGI0 708 aa12.66□□□□□ -0.38
CHRAC1-204ENST00000519618 PLEKHG5O94827 1062 aa12.61□□□□□ -0.39
CHRAC1-204ENST00000519618 PLSCR2Q9NRY7 297 aa12.61□□□□□ -0.39
CHRAC1-204ENST00000519618 FBXO3Q9UK99 471 aa12.61□□□□□ -0.39
CHRAC1-204ENST00000519618 GALR2O43603 387 aaPredicted RBP12.58□□□□□ -0.4
CHRAC1-204ENST00000519618 MIER1Q8N108 512 aa12.58□□□□□ -0.4
CHRAC1-204ENST00000519618 OTUD5Q96G74 571 aa12.58□□□□□ -0.4
CHRAC1-204ENST00000519618 PAK3O75914 559 aaPredicted RBP12.53□□□□□ -0.4
CHRAC1-204ENST00000519618 POTEB2H3BUK9 544 aa12.51□□□□□ -0.41
CHRAC1-204ENST00000519618 PLCD3Q8N3E9 789 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms