RNA–Protein interactions for RNA: ENST00000519448.1

CCDC69-203, Transcript of coiled-coil domain containing 69, humanhuman

TSL 1 (best)

Gene CCDC69, Length 3,252 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC69-203ENST00000519448 NISCHQ9Y2I1 1504 aa21.48■■□□□ 1.03
CCDC69-203ENST00000519448 PELP1Q8IZL8 1130 aaKnown RBP20.01■□□□□ 0.79
CCDC69-203ENST00000519448 MYT1Q01538 1121 aa19.69■□□□□ 0.74
CCDC69-203ENST00000519448 TTBK1Q5TCY1 1321 aaPredicted RBP19■□□□□ 0.63
CCDC69-203ENST00000519448 HRCP23327 699 aa18.71■□□□□ 0.59
CCDC69-203ENST00000519448 SHROOM4Q9ULL8 1493 aa18.61■□□□□ 0.57
CCDC69-203ENST00000519448 DCAF8L2P0C7V8 631 aa18.55■□□□□ 0.56
CCDC69-203ENST00000519448 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
CCDC69-203ENST00000519448 CCDC180Q9P1Z9 1646 aa18.2■□□□□ 0.5
CCDC69-203ENST00000519448 PRKCSHP14314 528 aaPredicted RBP18.19■□□□□ 0.5
CCDC69-203ENST00000519448 SUPT5HO00267 1087 aaKnown RBP18.08■□□□□ 0.49
CCDC69-203ENST00000519448 ZCCHC6Q5VYS8 1495 aaKnown RBP18.05■□□□□ 0.48
CCDC69-203ENST00000519448 APLP2Q06481 763 aa17.99■□□□□ 0.47
CCDC69-203ENST00000519448 ERICH6Q7L0X2 663 aa17.91■□□□□ 0.46
CCDC69-203ENST00000519448 BCL11AQ9H165 835 aa17.89■□□□□ 0.45
CCDC69-203ENST00000519448 PPARGC1BQ86YN6 1023 aaKnown RBP17.87■□□□□ 0.45
CCDC69-203ENST00000519448 FAM9AQ8IZU1 332 aaPredicted RBP17.68■□□□□ 0.42
CCDC69-203ENST00000519448 ABCC9O60706 1549 aa17.66■□□□□ 0.42
CCDC69-203ENST00000519448 CENPBP07199 599 aaPredicted RBP17.5■□□□□ 0.39
CCDC69-203ENST00000519448 ACIN1Q9UKV3 1341 aaKnown RBP17.48■□□□□ 0.39
CCDC69-203ENST00000519448 SLC24A1O60721 1099 aa17.44■□□□□ 0.38
CCDC69-203ENST00000519448 SCRIBQ14160 1630 aa17.4■□□□□ 0.38
CCDC69-203ENST00000519448 PCGF6Q9BYE7 350 aa17.38■□□□□ 0.37
CCDC69-203ENST00000519448 DCAF1Q9Y4B6 1507 aa17.37■□□□□ 0.37
CCDC69-203ENST00000519448 ZEB1P37275 1124 aaPredicted RBP17.28■□□□□ 0.36
CCDC69-203ENST00000519448 MYO15BQ96JP2 1530 aa17.26■□□□□ 0.35
CCDC69-203ENST00000519448 NEUROD1Q13562 356 aa17.25■□□□□ 0.35
CCDC69-203ENST00000519448 GTF3C3Q9Y5Q9 886 aa17.23■□□□□ 0.35
CCDC69-203ENST00000519448 ANP32EQ9BTT0 268 aa17.18■□□□□ 0.34
CCDC69-203ENST00000519448 CHIC1Q5VXU3 224 aa17.16■□□□□ 0.34
CCDC69-203ENST00000519448 NACADO15069 1562 aa17■□□□□ 0.31
CCDC69-203ENST00000519448 DAXXQ9UER7 740 aaPredicted RBP16.99■□□□□ 0.31
CCDC69-203ENST00000519448 PABPN1Q86U42 306 aaKnown RBP eCLIP16.97■□□□□ 0.31
CCDC69-203ENST00000519448 CECR2Q9BXF3 1484 aa16.96■□□□□ 0.31
CCDC69-203ENST00000519448 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.31
CCDC69-203ENST00000519448 EHMT2Q96KQ7 1210 aa16.9■□□□□ 0.3
CCDC69-203ENST00000519448 CSRNP3Q8WYN3 585 aa16.9■□□□□ 0.3
CCDC69-203ENST00000519448 RB1CC1Q8TDY2 1594 aa16.87■□□□□ 0.29
CCDC69-203ENST00000519448 LOC105371045A0A1W2PR82 267 aa16.85■□□□□ 0.29
CCDC69-203ENST00000519448 TRIM26Q12899 539 aaPredicted RBP16.83■□□□□ 0.28
CCDC69-203ENST00000519448 MROH2BQ7Z745 1585 aa16.8■□□□□ 0.28
CCDC69-203ENST00000519448 UBE2Q2Q8WVN8 375 aa16.73■□□□□ 0.27
CCDC69-203ENST00000519448 TRIM41Q8WV44 630 aa16.7■□□□□ 0.26
CCDC69-203ENST00000519448 WIZO95785 1651 aa16.69■□□□□ 0.26
CCDC69-203ENST00000519448 EIF5BO60841 1220 aaKnown RBP16.68■□□□□ 0.26
CCDC69-203ENST00000519448 UNC13AQ9UPW8 1703 aa16.59■□□□□ 0.25
CCDC69-203ENST00000519448 CLSPNQ9HAW4 1339 aa16.55■□□□□ 0.24
CCDC69-203ENST00000519448 ANO8Q9HCE9 1232 aaPredicted RBP16.53■□□□□ 0.24
CCDC69-203ENST00000519448 TSHZ2Q9NRE2 1034 aa16.52■□□□□ 0.23
CCDC69-203ENST00000519448 BAZ1AQ9NRL2 1556 aaPredicted RBP16.49■□□□□ 0.23
CCDC69-203ENST00000519448 BICRAQ9NZM4 1560 aa16.44■□□□□ 0.22
CCDC69-203ENST00000519448 DIEXFQ68CQ4 756 aaKnown RBP16.43■□□□□ 0.22
CCDC69-203ENST00000519448 SMARCA4P51532 1647 aa16.42■□□□□ 0.22
CCDC69-203ENST00000519448 ERICH6BQ5W0A0 696 aa16.37■□□□□ 0.21
CCDC69-203ENST00000519448 CCDC88BA6NC98 1476 aa16.34■□□□□ 0.21
CCDC69-203ENST00000519448 MYT1LQ9UL68 1186 aa16.33■□□□□ 0.2
CCDC69-203ENST00000519448 ABCC8Q09428 1581 aa16.31■□□□□ 0.2
CCDC69-203ENST00000519448 TOP2AP11388 1531 aaKnown RBP16.28■□□□□ 0.2
CCDC69-203ENST00000519448 SUPT16HQ9Y5B9 1047 aaKnown RBP16.25■□□□□ 0.19
CCDC69-203ENST00000519448 SMARCA2P51531 1590 aa16.23■□□□□ 0.19
CCDC69-203ENST00000519448 PLEKHG5O94827 1062 aa16.2■□□□□ 0.18
CCDC69-203ENST00000519448 SALL2Q9Y467 1007 aaPredicted RBP16.2■□□□□ 0.18
CCDC69-203ENST00000519448 PKNOX2Q96KN3 472 aa16.18■□□□□ 0.18
CCDC69-203ENST00000519448 ATAD2BQ9ULI0 1458 aa16.14■□□□□ 0.17
CCDC69-203ENST00000519448 BAZ1BQ9UIG0 1483 aaKnown RBP16.13■□□□□ 0.17
CCDC69-203ENST00000519448 RANGAP1P46060 587 aaPredicted RBP16.11■□□□□ 0.17
CCDC69-203ENST00000519448 SOGA1O94964 1423 aa16.09■□□□□ 0.17
CCDC69-203ENST00000519448 PODXL2Q9NZ53 605 aa16.09■□□□□ 0.17
CCDC69-203ENST00000519448 EIF4G1Q04637 1599 aaKnown RBP16.09■□□□□ 0.17
CCDC69-203ENST00000519448 RUSC2Q8N2Y8 1516 aa16.05■□□□□ 0.16
CCDC69-203ENST00000519448 UBTFP17480 764 aaKnown RBP16.05■□□□□ 0.16
CCDC69-203ENST00000519448 MSH5O43196 834 aa15.99■□□□□ 0.15
CCDC69-203ENST00000519448 DEKP35659 375 aaKnown RBP15.98■□□□□ 0.15
CCDC69-203ENST00000519448 WRNQ14191 1432 aaPredicted RBP eCLIP15.97■□□□□ 0.15
CCDC69-203ENST00000519448 RBM19Q9Y4C8 960 aaKnown RBP15.97■□□□□ 0.15
CCDC69-203ENST00000519448 CCDC136Q96JN2 1154 aa15.95■□□□□ 0.14
CCDC69-203ENST00000519448 FANCIQ9NVI1 1328 aa15.93■□□□□ 0.14
CCDC69-203ENST00000519448 PEG3Q9GZU2 1588 aa15.93■□□□□ 0.14
CCDC69-203ENST00000519448 YTHDC1Q96MU7 727 aaKnown RBP15.93■□□□□ 0.14
CCDC69-203ENST00000519448 ZNF316A6NFI3 1004 aaPredicted RBP15.92■□□□□ 0.14
CCDC69-203ENST00000519448 SYNJ1O43426 1573 aa15.88■□□□□ 0.13
CCDC69-203ENST00000519448 MIER1Q8N108 512 aa15.87■□□□□ 0.13
CCDC69-203ENST00000519448 CEP162Q5TB80 1403 aa15.79■□□□□ 0.12
CCDC69-203ENST00000519448 NCAPD3P42695 1498 aa15.79■□□□□ 0.12
CCDC69-203ENST00000519448 DNAJC5BQ9UF47 199 aa15.75■□□□□ 0.11
CCDC69-203ENST00000519448 NEFLP07196 543 aa15.73■□□□□ 0.11
CCDC69-203ENST00000519448 CCER1Q8TC90 406 aaPredicted RBP15.72■□□□□ 0.11
CCDC69-203ENST00000519448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.71■□□□□ 0.11
CCDC69-203ENST00000519448 CC2D2AQ9P2K1 1620 aa15.7■□□□□ 0.1
CCDC69-203ENST00000519448 HMGXB3Q12766 1538 aa15.69■□□□□ 0.1
CCDC69-203ENST00000519448 TNIKQ9UKE5 1360 aa15.68■□□□□ 0.1
CCDC69-203ENST00000519448 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.68■□□□□ 0.1
CCDC69-203ENST00000519448 GOLGA3Q08378 1498 aa15.68■□□□□ 0.1
CCDC69-203ENST00000519448 RAPGEF2Q9Y4G8 1499 aa15.67■□□□□ 0.1
CCDC69-203ENST00000519448 EEA1Q15075 1411 aa15.65■□□□□ 0.1
CCDC69-203ENST00000519448 CUX1P39880 1505 aa15.63■□□□□ 0.09
CCDC69-203ENST00000519448 IL27Q8NEV9 243 aa15.61■□□□□ 0.09
CCDC69-203ENST00000519448 CFTRP13569 1480 aa15.6■□□□□ 0.09
CCDC69-203ENST00000519448 NESP48681 1621 aa15.6■□□□□ 0.09
CCDC69-203ENST00000519448 CEP164Q9UPV0 1460 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms