RNA–Protein interactions for RNA: ENST00000519078.6

CDK1-207, Transcript of cyclin dependent kinase 1, humanhuman

TSL 3

Gene CDK1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK1-207ENST00000519078 AEBP2Q6ZN18 517 aaPredicted RBP24.49■■□□□ 1.51
CDK1-207ENST00000519078 CHIC1Q5VXU3 224 aa23.4■■□□□ 1.34
CDK1-207ENST00000519078 SENP3Q9H4L4 574 aaPredicted RBP20.96■□□□□ 0.95
CDK1-207ENST00000519078 PHF23Q9BUL5 403 aaPredicted RBP20.64■□□□□ 0.89
CDK1-207ENST00000519078 FOXD1Q16676 465 aa19.46■□□□□ 0.71
CDK1-207ENST00000519078 PLPPR3Q6T4P5 718 aa18.77■□□□□ 0.6
CDK1-207ENST00000519078 MSH5O43196 834 aa18.25■□□□□ 0.51
CDK1-207ENST00000519078 PIAS4Q8N2W9 510 aaPredicted RBP18.24■□□□□ 0.51
CDK1-207ENST00000519078 PPP6R1Q9UPN7 881 aa18.23■□□□□ 0.51
CDK1-207ENST00000519078 ADRA2BP18089 450 aa18.18■□□□□ 0.5
CDK1-207ENST00000519078 POTEDQ86YR6 584 aa17.66■□□□□ 0.42
CDK1-207ENST00000519078 SCAF1Q9H7N4 1312 aaKnown RBP16.73■□□□□ 0.27
CDK1-207ENST00000519078 MAPK8IP2Q13387 824 aaPredicted RBP16.65■□□□□ 0.26
CDK1-207ENST00000519078 DMRT2Q9Y5R5 561 aa16.62■□□□□ 0.25
CDK1-207ENST00000519078 PPP4R3CPQ6ZMV5 832 aa16.43■□□□□ 0.22
CDK1-207ENST00000519078 CNKSR2Q8WXI2 1034 aa16.14■□□□□ 0.17
CDK1-207ENST00000519078 HOXD11P31277 338 aaPredicted RBP16.05■□□□□ 0.16
CDK1-207ENST00000519078 RNF216Q9NWF9 866 aaPredicted RBP15.96■□□□□ 0.15
CDK1-207ENST00000519078 DCAF8L1A6NGE4 600 aa15.89■□□□□ 0.13
CDK1-207ENST00000519078 NCBP3Q53F19 620 aaKnown RBP15.87■□□□□ 0.13
CDK1-207ENST00000519078 NPM3O75607 178 aaKnown RBP15.59■□□□□ 0.09
CDK1-207ENST00000519078 CACNB1Q02641 598 aaPredicted RBP15.56■□□□□ 0.08
CDK1-207ENST00000519078 RNF39Q9H2S5 420 aa15.55■□□□□ 0.08
CDK1-207ENST00000519078 DNAJC5BQ9UF47 199 aa15.54■□□□□ 0.08
CDK1-207ENST00000519078 C1QBPQ07021 282 aaKnown RBP15.35■□□□□ 0.05
CDK1-207ENST00000519078 KCNA4P22459 653 aa15.34■□□□□ 0.05
CDK1-207ENST00000519078 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.27■□□□□ 0.042e-8■■■■□ 21.6
CDK1-207ENST00000519078 U3KPZ7 1027 aaPredicted RBP14.96□□□□□ -0.01
CDK1-207ENST00000519078 NISCHQ9Y2I1 1504 aa14.86□□□□□ -0.03
CDK1-207ENST00000519078 SLC4A2P04920 1241 aa14.84□□□□□ -0.03
CDK1-207ENST00000519078 CAPN15O75808 1086 aa14.68□□□□□ -0.06
CDK1-207ENST00000519078 SPINK5Q9NQ38 1064 aaPredicted RBP14.68□□□□□ -0.06
CDK1-207ENST00000519078 APLP2Q06481 763 aa14.65□□□□□ -0.06
CDK1-207ENST00000519078 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.63□□□□□ -0.07
CDK1-207ENST00000519078 HNRNPUL2Q1KMD3 747 aaKnown RBP14.63□□□□□ -0.07
CDK1-207ENST00000519078 DSG3P32926 999 aa14.58□□□□□ -0.08
CDK1-207ENST00000519078 SAMD1Q6SPF0 538 aaPredicted RBP14.53□□□□□ -0.08
CDK1-207ENST00000519078 SLC4A1APQ9BWU0 796 aaKnown RBP14.53□□□□□ -0.08
CDK1-207ENST00000519078 ZNF219Q9P2Y4 722 aaPredicted RBP14.5□□□□□ -0.09
CDK1-207ENST00000519078 MYCNP04198 464 aaPredicted RBP14.47□□□□□ -0.09
CDK1-207ENST00000519078 TRHP20396 242 aaPredicted RBP14.46□□□□□ -0.09
CDK1-207ENST00000519078 FOXD4L1Q9NU39 408 aa14.35□□□□□ -0.11
CDK1-207ENST00000519078 ABCB7O75027 752 aa14.33□□□□□ -0.12
CDK1-207ENST00000519078 ZBTB22O15209 634 aa14.09□□□□□ -0.15
CDK1-207ENST00000519078 POLA2Q14181 598 aa14.09□□□□□ -0.15
CDK1-207ENST00000519078 ATF5Q9Y2D1 282 aaPredicted RBP14.03□□□□□ -0.16
CDK1-207ENST00000519078 RBM42Q9BTD8 480 aaKnown RBP13.98□□□□□ -0.17
CDK1-207ENST00000519078 ATXN8OSP0DMR3 200 aa13.93□□□□□ -0.18
CDK1-207ENST00000519078 ZBTB12Q9Y330 459 aaPredicted RBP13.9□□□□□ -0.18
CDK1-207ENST00000519078 POTEHQ6S545 545 aa13.83□□□□□ -0.2
CDK1-207ENST00000519078 OSCARQ8IYS5 282 aa13.65□□□□□ -0.22
CDK1-207ENST00000519078 AKT1S1Q96B36 256 aa13.64□□□□□ -0.23
CDK1-207ENST00000519078 CHRDL2Q6WN34 429 aa13.58□□□□□ -0.24
CDK1-207ENST00000519078 FBLN2P98095 1184 aa13.56□□□□□ -0.24
CDK1-207ENST00000519078 CSRNP3Q8WYN3 585 aa13.53□□□□□ -0.24
CDK1-207ENST00000519078 REM2Q8IYK8 340 aaPredicted RBP13.47□□□□□ -0.25
CDK1-207ENST00000519078 SPDYE2BA6NHP3 402 aa13.45□□□□□ -0.26
CDK1-207ENST00000519078 SPDYE6P0CI01 402 aa13.45□□□□□ -0.26
CDK1-207ENST00000519078 SPDYE2Q495Y8 402 aa13.45□□□□□ -0.26
CDK1-207ENST00000519078 EHMT2Q96KQ7 1210 aa13.42□□□□□ -0.26
CDK1-207ENST00000519078 MKRN4PQ13434 485 aaPredicted RBP13.41□□□□□ -0.26
CDK1-207ENST00000519078 PITPNM1O00562 1244 aa13.34□□□□□ -0.27
CDK1-207ENST00000519078 ZNF692Q9BU19 519 aaPredicted RBP13.27□□□□□ -0.29
CDK1-207ENST00000519078 SSUH2Q9Y2M2 353 aa13.27□□□□□ -0.29
CDK1-207ENST00000519078 PIP4P2Q8N4L2 257 aa13.26□□□□□ -0.29
CDK1-207ENST00000519078 FXR2P51116 673 aaKnown RBP eCLIP13.22□□□□□ -0.29
CDK1-207ENST00000519078 SPDYE1Q8NFV5 336 aaPredicted RBP13.18□□□□□ -0.3
CDK1-207ENST00000519078 CLEC11AQ9Y240 323 aa13.12□□□□□ -0.31
CDK1-207ENST00000519078 PABPN1Q86U42 306 aaKnown RBP eCLIP13.06□□□□□ -0.32
CDK1-207ENST00000519078 SP7Q8TDD2 431 aaPredicted RBP13.02□□□□□ -0.33
CDK1-207ENST00000519078 PRKAR2AP13861 404 aaKnown RBP13□□□□□ -0.33
CDK1-207ENST00000519078 HAX1O00165 279 aa12.99□□□□□ -0.33
CDK1-207ENST00000519078 PRR29P0C7W0 189 aa12.94□□□□□ -0.34
CDK1-207ENST00000519078 SPDYE4A6NLX3 237 aa12.85□□□□□ -0.35
CDK1-207ENST00000519078 CHADLQ6NUI6 762 aa12.84□□□□□ -0.35
CDK1-207ENST00000519078 CCDC180Q9P1Z9 1646 aa12.8□□□□□ -0.36
CDK1-207ENST00000519078 C19orf67A6NJJ6 358 aa12.79□□□□□ -0.36
CDK1-207ENST00000519078 EVX2Q03828 476 aa12.79□□□□□ -0.36
CDK1-207ENST00000519078 STAG3Q9UJ98 1225 aa12.79□□□□□ -0.36
CDK1-207ENST00000519078 FARP1Q9Y4F1 1045 aaPredicted RBP12.69□□□□□ -0.38
CDK1-207ENST00000519078 CREBZFQ9NS37 354 aa12.61□□□□□ -0.39
CDK1-207ENST00000519078 CD44P16070 742 aaKnown RBP12.6□□□□□ -0.39
CDK1-207ENST00000519078 PROM2Q8N271 834 aa12.58□□□□□ -0.4
CDK1-207ENST00000519078 GABBR2O75899 941 aa12.56□□□□□ -0.4
CDK1-207ENST00000519078 CLCN6P51797 869 aa12.49□□□□□ -0.41
CDK1-207ENST00000519078 ZCCHC6Q5VYS8 1495 aaKnown RBP12.45□□□□□ -0.42
CDK1-207ENST00000519078 NPM1P06748 294 aaKnown RBP eCLIP12.44□□□□□ -0.42
CDK1-207ENST00000519078 DCAF8L2P0C7V8 631 aa12.43□□□□□ -0.42
CDK1-207ENST00000519078 ZNF579Q8NAF0 562 aaKnown RBP12.43□□□□□ -0.42
CDK1-207ENST00000519078 ZRANB1Q9UGI0 708 aa12.43□□□□□ -0.42
CDK1-207ENST00000519078 MNX1P50219 401 aaPredicted RBP12.41□□□□□ -0.42
CDK1-207ENST00000519078 PAK3O75914 559 aaPredicted RBP12.4□□□□□ -0.42
CDK1-207ENST00000519078 PLEKHG5O94827 1062 aa12.3□□□□□ -0.44
CDK1-207ENST00000519078 DCAF1Q9Y4B6 1507 aa12.3□□□□□ -0.44
CDK1-207ENST00000519078 FKBP8Q14318 412 aa12.29□□□□□ -0.44
CDK1-207ENST00000519078 POTEIP0CG38 1075 aa12.27□□□□□ -0.45
CDK1-207ENST00000519078 DCBLD2Q96PD2 775 aa12.26□□□□□ -0.45
CDK1-207ENST00000519078 MIER1Q8N108 512 aa12.23□□□□□ -0.45
CDK1-207ENST00000519078 PHF12Q96QT6 1004 aa12.23□□□□□ -0.45
CDK1-207ENST00000519078 SHROOM4Q9ULL8 1493 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 155.2 ms