RNA–Protein interactions for RNA: ENST00000518998.5

RAD54B-205, Transcript of RAD54 homolog B, humanhuman

TSL 3

Gene RAD54B, Length 599 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD54B-205ENST00000518998 AEBP2Q6ZN18 517 aaPredicted RBP23.26■■□□□ 1.31
RAD54B-205ENST00000518998 CHIC1Q5VXU3 224 aa22.59■■□□□ 1.21
RAD54B-205ENST00000518998 PHF23Q9BUL5 403 aaPredicted RBP19.87■□□□□ 0.77
RAD54B-205ENST00000518998 SENP3Q9H4L4 574 aaPredicted RBP19.73■□□□□ 0.75
RAD54B-205ENST00000518998 FOXD1Q16676 465 aa18.34■□□□□ 0.53
RAD54B-205ENST00000518998 PLPPR3Q6T4P5 718 aa18.28■□□□□ 0.52
RAD54B-205ENST00000518998 PPP6R1Q9UPN7 881 aa17.58■□□□□ 0.4
RAD54B-205ENST00000518998 ADRA2BP18089 450 aa17.55■□□□□ 0.4
RAD54B-205ENST00000518998 PIAS4Q8N2W9 510 aaPredicted RBP17.27■□□□□ 0.36
RAD54B-205ENST00000518998 MSH5O43196 834 aa16.94■□□□□ 0.3
RAD54B-205ENST00000518998 PPP4R3CPQ6ZMV5 832 aa16.11■□□□□ 0.17
RAD54B-205ENST00000518998 SCAF1Q9H7N4 1312 aaKnown RBP16.02■□□□□ 0.16
RAD54B-205ENST00000518998 MAPK8IP2Q13387 824 aaPredicted RBP15.97■□□□□ 0.15
RAD54B-205ENST00000518998 DMRT2Q9Y5R5 561 aa15.74■□□□□ 0.11
RAD54B-205ENST00000518998 CNKSR2Q8WXI2 1034 aa15.68■□□□□ 0.1
RAD54B-205ENST00000518998 POTEDQ86YR6 584 aa15.65■□□□□ 0.1
RAD54B-205ENST00000518998 NCBP3Q53F19 620 aaKnown RBP15.64■□□□□ 0.09
RAD54B-205ENST00000518998 KCNA4P22459 653 aa15.61■□□□□ 0.09
RAD54B-205ENST00000518998 NPM3O75607 178 aaKnown RBP15.42■□□□□ 0.06
RAD54B-205ENST00000518998 RNF216Q9NWF9 866 aaPredicted RBP15.39■□□□□ 0.05
RAD54B-205ENST00000518998 HOXD11P31277 338 aaPredicted RBP15.36■□□□□ 0.05
RAD54B-205ENST00000518998 DCAF8L1A6NGE4 600 aa15.08■□□□□ 0
RAD54B-205ENST00000518998 DNAJC5BQ9UF47 199 aa14.96□□□□□ -0.01
RAD54B-205ENST00000518998 SLC4A1APQ9BWU0 796 aaKnown RBP14.84□□□□□ -0.03
RAD54B-205ENST00000518998 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.65□□□□□ -0.06
RAD54B-205ENST00000518998 SLC4A2P04920 1241 aa14.6□□□□□ -0.07
RAD54B-205ENST00000518998 RNF39Q9H2S5 420 aa14.51□□□□□ -0.09
RAD54B-205ENST00000518998 U3KPZ7 1027 aaPredicted RBP14.4□□□□□ -0.1
RAD54B-205ENST00000518998 FOXD4L1Q9NU39 408 aa14.38□□□□□ -0.11
RAD54B-205ENST00000518998 ZBTB22O15209 634 aa14.36□□□□□ -0.11
RAD54B-205ENST00000518998 C1QBPQ07021 282 aaKnown RBP14.32□□□□□ -0.12
RAD54B-205ENST00000518998 EHMT2Q96KQ7 1210 aa14.29□□□□□ -0.12
RAD54B-205ENST00000518998 MYCNP04198 464 aaPredicted RBP14.24□□□□□ -0.13
RAD54B-205ENST00000518998 CACNB1Q02641 598 aaPredicted RBP14.23□□□□□ -0.13
RAD54B-205ENST00000518998 CSRNP3Q8WYN3 585 aa14.18□□□□□ -0.14
RAD54B-205ENST00000518998 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.16□□□□□ -0.14
RAD54B-205ENST00000518998 HNRNPUL2Q1KMD3 747 aaKnown RBP14.16□□□□□ -0.14
RAD54B-205ENST00000518998 SAMD1Q6SPF0 538 aaPredicted RBP14.11□□□□□ -0.15
RAD54B-205ENST00000518998 SPINK5Q9NQ38 1064 aaPredicted RBP14.04□□□□□ -0.16
RAD54B-205ENST00000518998 APLP2Q06481 763 aa14.03□□□□□ -0.16
RAD54B-205ENST00000518998 CAPN15O75808 1086 aa13.98□□□□□ -0.17
RAD54B-205ENST00000518998 TRHP20396 242 aaPredicted RBP13.9□□□□□ -0.18
RAD54B-205ENST00000518998 ATF5Q9Y2D1 282 aaPredicted RBP13.9□□□□□ -0.18
RAD54B-205ENST00000518998 ATXN8OSP0DMR3 200 aa13.89□□□□□ -0.19
RAD54B-205ENST00000518998 ZNF219Q9P2Y4 722 aaPredicted RBP13.86□□□□□ -0.19
RAD54B-205ENST00000518998 DSG3P32926 999 aa13.78□□□□□ -0.2
RAD54B-205ENST00000518998 ABCB7O75027 752 aa13.72□□□□□ -0.21
RAD54B-205ENST00000518998 POLA2Q14181 598 aa13.65□□□□□ -0.22
RAD54B-205ENST00000518998 ZBTB12Q9Y330 459 aaPredicted RBP13.39□□□□□ -0.27
RAD54B-205ENST00000518998 FBLN2P98095 1184 aa13.3□□□□□ -0.28
RAD54B-205ENST00000518998 MKRN4PQ13434 485 aaPredicted RBP13.28□□□□□ -0.28
RAD54B-205ENST00000518998 OSCARQ8IYS5 282 aa13.18□□□□□ -0.3
RAD54B-205ENST00000518998 RBM42Q9BTD8 480 aaKnown RBP13.11□□□□□ -0.31
RAD54B-205ENST00000518998 SPDYE2BA6NHP3 402 aa13.02□□□□□ -0.33
RAD54B-205ENST00000518998 SPDYE6P0CI01 402 aa13.02□□□□□ -0.33
RAD54B-205ENST00000518998 SPDYE2Q495Y8 402 aa13.02□□□□□ -0.33
RAD54B-205ENST00000518998 ZNF692Q9BU19 519 aaPredicted RBP12.97□□□□□ -0.33
RAD54B-205ENST00000518998 AKT1S1Q96B36 256 aa12.94□□□□□ -0.34
RAD54B-205ENST00000518998 SPDYE4A6NLX3 237 aa12.92□□□□□ -0.34
RAD54B-205ENST00000518998 SSUH2Q9Y2M2 353 aa12.91□□□□□ -0.34
RAD54B-205ENST00000518998 FKBP8Q14318 412 aa12.83□□□□□ -0.36
RAD54B-205ENST00000518998 REM2Q8IYK8 340 aaPredicted RBP12.83□□□□□ -0.36
RAD54B-205ENST00000518998 PABPN1Q86U42 306 aaKnown RBP eCLIP12.8□□□□□ -0.36
RAD54B-205ENST00000518998 PITPNM1O00562 1244 aa12.68□□□□□ -0.38
RAD54B-205ENST00000518998 PROM2Q8N271 834 aa12.68□□□□□ -0.38
RAD54B-205ENST00000518998 SPDYE1Q8NFV5 336 aaPredicted RBP12.67□□□□□ -0.38
RAD54B-205ENST00000518998 CLEC11AQ9Y240 323 aa12.63□□□□□ -0.39
RAD54B-205ENST00000518998 CHRDL2Q6WN34 429 aa12.62□□□□□ -0.39
RAD54B-205ENST00000518998 STAG3Q9UJ98 1225 aa12.54□□□□□ -0.4
RAD54B-205ENST00000518998 PRR29P0C7W0 189 aa12.5□□□□□ -0.41
RAD54B-205ENST00000518998 FXR2P51116 673 aaKnown RBP eCLIP12.46□□□□□ -0.41
RAD54B-205ENST00000518998 PIP4P2Q8N4L2 257 aa12.46□□□□□ -0.41
RAD54B-205ENST00000518998 FBXO3Q9UK99 471 aa12.38□□□□□ -0.43
RAD54B-205ENST00000518998 POTEHQ6S545 545 aa12.37□□□□□ -0.43
RAD54B-205ENST00000518998 PRKAR2AP13861 404 aaKnown RBP12.36□□□□□ -0.43
RAD54B-205ENST00000518998 CHADLQ6NUI6 762 aa12.34□□□□□ -0.43
RAD54B-205ENST00000518998 CREBZFQ9NS37 354 aa12.32□□□□□ -0.44
RAD54B-205ENST00000518998 MIER1Q8N108 512 aa12.27□□□□□ -0.45
RAD54B-205ENST00000518998 VASPP50552 380 aaPredicted RBP12.23□□□□□ -0.45
RAD54B-205ENST00000518998 PLCD3Q8N3E9 789 aa12.23□□□□□ -0.45
RAD54B-205ENST00000518998 FARP1Q9Y4F1 1045 aaPredicted RBP12.21□□□□□ -0.45
RAD54B-205ENST00000518998 PLEKHG5O94827 1062 aa12.2□□□□□ -0.46
RAD54B-205ENST00000518998 MNX1P50219 401 aaPredicted RBP12.17□□□□□ -0.46
RAD54B-205ENST00000518998 NPM1P06748 294 aaKnown RBP eCLIP12.1□□□□□ -0.47
RAD54B-205ENST00000518998 HAX1O00165 279 aa12.08□□□□□ -0.48
RAD54B-205ENST00000518998 ZBTB47Q9UFB7 747 aaPredicted RBP12.08□□□□□ -0.48
RAD54B-205ENST00000518998 IFNLR1Q8IU57 520 aaPredicted RBP12.06□□□□□ -0.48
RAD54B-205ENST00000518998 KLHL34Q8N239 644 aa12.05□□□□□ -0.48
RAD54B-205ENST00000518998 C19orf67A6NJJ6 358 aa12.04□□□□□ -0.48
RAD54B-205ENST00000518998 CD44P16070 742 aaKnown RBP11.99□□□□□ -0.49
RAD54B-205ENST00000518998 EVX2Q03828 476 aa11.99□□□□□ -0.49
RAD54B-205ENST00000518998 NUBP1P53384 320 aa11.97□□□□□ -0.49
RAD54B-205ENST00000518998 RASEFQ8IZ41 740 aa11.94□□□□□ -0.5
RAD54B-205ENST00000518998 SPOCK2Q92563 424 aa11.94□□□□□ -0.5
RAD54B-205ENST00000518998 PAK3O75914 559 aaPredicted RBP11.92□□□□□ -0.5
RAD54B-205ENST00000518998 TSPYL2Q9H2G4 693 aaPredicted RBP11.92□□□□□ -0.5
RAD54B-205ENST00000518998 ZRANB1Q9UGI0 708 aa11.92□□□□□ -0.5
RAD54B-205ENST00000518998 FAM212AQ96EL1 285 aa11.86□□□□□ -0.51
RAD54B-205ENST00000518998 DCAF8Q5TAQ9 597 aa11.85□□□□□ -0.51
RAD54B-205ENST00000518998 SP7Q8TDD2 431 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms