RNA–Protein interactions for RNA: ENST00000518898.6

GTF2H2-206, Transcript of general transcription factor IIH subunit 2, humanhuman

TSL 5

Gene GTF2H2, Length 1,569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H2-206ENST00000518898 AEBP2Q6ZN18 517 aaPredicted RBP20.08■□□□□ 0.8
GTF2H2-206ENST00000518898 CHIC1Q5VXU3 224 aa18.86■□□□□ 0.61
GTF2H2-206ENST00000518898 SENP3Q9H4L4 574 aaPredicted RBP17.38■□□□□ 0.37
GTF2H2-206ENST00000518898 PHF23Q9BUL5 403 aaPredicted RBP16.98■□□□□ 0.31
GTF2H2-206ENST00000518898 POTEDQ86YR6 584 aa16.82■□□□□ 0.28
GTF2H2-206ENST00000518898 FOXD1Q16676 465 aa16.25■□□□□ 0.19
GTF2H2-206ENST00000518898 MSH5O43196 834 aa15.66■□□□□ 0.1
GTF2H2-206ENST00000518898 PIAS4Q8N2W9 510 aaPredicted RBP14.97□□□□□ -0.01
GTF2H2-206ENST00000518898 PPP6R1Q9UPN7 881 aa14.42□□□□□ -0.1
GTF2H2-206ENST00000518898 ADRA2BP18089 450 aa14.34□□□□□ -0.11
GTF2H2-206ENST00000518898 PLPPR3Q6T4P5 718 aa14.15□□□□□ -0.14
GTF2H2-206ENST00000518898 CACNB1Q02641 598 aaPredicted RBP13.99□□□□□ -0.17
GTF2H2-206ENST00000518898 NISCHQ9Y2I1 1504 aa13.9□□□□□ -0.18
GTF2H2-206ENST00000518898 DMRT2Q9Y5R5 561 aa13.61□□□□□ -0.23
GTF2H2-206ENST00000518898 MAPK8IP2Q13387 824 aaPredicted RBP13.44□□□□□ -0.26
GTF2H2-206ENST00000518898 SCAF1Q9H7N4 1312 aaKnown RBP13.24□□□□□ -0.29
GTF2H2-206ENST00000518898 RNF39Q9H2S5 420 aa13.22□□□□□ -0.29
GTF2H2-206ENST00000518898 DCAF8L1A6NGE4 600 aa13.09□□□□□ -0.31
GTF2H2-206ENST00000518898 C1QBPQ07021 282 aaKnown RBP13.02□□□□□ -0.33
GTF2H2-206ENST00000518898 POTEHQ6S545 545 aa13.01□□□□□ -0.33
GTF2H2-206ENST00000518898 HOXD11P31277 338 aaPredicted RBP12.74□□□□□ -0.37
GTF2H2-206ENST00000518898 DNAJC5BQ9UF47 199 aa12.56□□□□□ -0.4
GTF2H2-206ENST00000518898 RNF216Q9NWF9 866 aaPredicted RBP12.4□□□□□ -0.42
GTF2H2-206ENST00000518898 CNKSR2Q8WXI2 1034 aa12.27□□□□□ -0.44
GTF2H2-206ENST00000518898 PPP4R3CPQ6ZMV5 832 aa12.26□□□□□ -0.45
GTF2H2-206ENST00000518898 CCDC180Q9P1Z9 1646 aa12.17□□□□□ -0.46
GTF2H2-206ENST00000518898 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.15□□□□□ -0.463e-7■■■□□ 15.2
GTF2H2-206ENST00000518898 DSG3P32926 999 aa12.05□□□□□ -0.48
GTF2H2-206ENST00000518898 CAPN15O75808 1086 aa11.92□□□□□ -0.5
GTF2H2-206ENST00000518898 SPINK5Q9NQ38 1064 aaPredicted RBP11.84□□□□□ -0.51
GTF2H2-206ENST00000518898 SP7Q8TDD2 431 aaPredicted RBP11.76□□□□□ -0.53
GTF2H2-206ENST00000518898 U3KPZ7 1027 aaPredicted RBP11.75□□□□□ -0.53
GTF2H2-206ENST00000518898 ABCC9O60706 1549 aa11.72□□□□□ -0.53
GTF2H2-206ENST00000518898 CHRDL2Q6WN34 429 aa11.67□□□□□ -0.54
GTF2H2-206ENST00000518898 ZCCHC6Q5VYS8 1495 aaKnown RBP11.62□□□□□ -0.55
GTF2H2-206ENST00000518898 RBM42Q9BTD8 480 aaKnown RBP11.61□□□□□ -0.55
GTF2H2-206ENST00000518898 NCBP3Q53F19 620 aaKnown RBP11.56□□□□□ -0.56
GTF2H2-206ENST00000518898 ABCB7O75027 752 aa11.5□□□□□ -0.57
GTF2H2-206ENST00000518898 DCAF1Q9Y4B6 1507 aa11.49□□□□□ -0.57
GTF2H2-206ENST00000518898 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
GTF2H2-206ENST00000518898 ZNF219Q9P2Y4 722 aaPredicted RBP11.47□□□□□ -0.57
GTF2H2-206ENST00000518898 DCAF8L2P0C7V8 631 aa11.46□□□□□ -0.57
GTF2H2-206ENST00000518898 APLP2Q06481 763 aa11.45□□□□□ -0.58
GTF2H2-206ENST00000518898 MYO15BQ96JP2 1530 aa11.43□□□□□ -0.58
GTF2H2-206ENST00000518898 NACADO15069 1562 aa11.39□□□□□ -0.59
GTF2H2-206ENST00000518898 RB1CC1Q8TDY2 1594 aa11.32□□□□□ -0.6
GTF2H2-206ENST00000518898 NPM3O75607 178 aaKnown RBP11.3□□□□□ -0.6
GTF2H2-206ENST00000518898 HAX1O00165 279 aa11.25□□□□□ -0.61
GTF2H2-206ENST00000518898 UNC13AQ9UPW8 1703 aa11.18□□□□□ -0.62
GTF2H2-206ENST00000518898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.18□□□□□ -0.62
GTF2H2-206ENST00000518898 HNRNPUL2Q1KMD3 747 aaKnown RBP11.18□□□□□ -0.62
GTF2H2-206ENST00000518898 PIP4P2Q8N4L2 257 aa11.16□□□□□ -0.62
GTF2H2-206ENST00000518898 SCRIBQ14160 1630 aa11.15□□□□□ -0.62
GTF2H2-206ENST00000518898 SHROOM4Q9ULL8 1493 aa11.13□□□□□ -0.63
GTF2H2-206ENST00000518898 AKT1S1Q96B36 256 aa11.11□□□□□ -0.63
GTF2H2-206ENST00000518898 BICRAQ9NZM4 1560 aa11.11□□□□□ -0.63
GTF2H2-206ENST00000518898 PLSCR2Q9NRY7 297 aa11.11□□□□□ -0.63
GTF2H2-206ENST00000518898 SAMD1Q6SPF0 538 aaPredicted RBP11.05□□□□□ -0.64
GTF2H2-206ENST00000518898 PABPN1Q86U42 306 aaKnown RBP eCLIP11.03□□□□□ -0.64
GTF2H2-206ENST00000518898 SLC4A2P04920 1241 aa11.03□□□□□ -0.64
GTF2H2-206ENST00000518898 LHX8Q68G74 356 aa11.03□□□□□ -0.64
GTF2H2-206ENST00000518898 FXR2P51116 673 aaKnown RBP eCLIP10.97□□□□□ -0.65
GTF2H2-206ENST00000518898 REM2Q8IYK8 340 aaPredicted RBP10.97□□□□□ -0.65
GTF2H2-206ENST00000518898 EVX2Q03828 476 aa10.96□□□□□ -0.65
GTF2H2-206ENST00000518898 POLA2Q14181 598 aa10.95□□□□□ -0.66
GTF2H2-206ENST00000518898 CECR2Q9BXF3 1484 aa10.86□□□□□ -0.67
GTF2H2-206ENST00000518898 PITPNM1O00562 1244 aa10.84□□□□□ -0.67
GTF2H2-206ENST00000518898 MROH2BQ7Z745 1585 aa10.75□□□□□ -0.69
GTF2H2-206ENST00000518898 ZBTB12Q9Y330 459 aaPredicted RBP10.74□□□□□ -0.69
GTF2H2-206ENST00000518898 GABBR2O75899 941 aa10.73□□□□□ -0.69
GTF2H2-206ENST00000518898 RSF1Q96T23 1441 aaPredicted RBP10.72□□□□□ -0.69
GTF2H2-206ENST00000518898 EIF4G1Q04637 1599 aaKnown RBP10.71□□□□□ -0.69
GTF2H2-206ENST00000518898 SMARCA4P51532 1647 aa10.71□□□□□ -0.7
GTF2H2-206ENST00000518898 BAZ1AQ9NRL2 1556 aaPredicted RBP10.7□□□□□ -0.7
GTF2H2-206ENST00000518898 C19orf67A6NJJ6 358 aa10.65□□□□□ -0.7
GTF2H2-206ENST00000518898 WIZO95785 1651 aa10.64□□□□□ -0.71
GTF2H2-206ENST00000518898 PEG3Q9GZU2 1588 aa10.62□□□□□ -0.71
GTF2H2-206ENST00000518898 CC2D2AQ9P2K1 1620 aa10.61□□□□□ -0.71
GTF2H2-206ENST00000518898 OSCARQ8IYS5 282 aa10.61□□□□□ -0.71
GTF2H2-206ENST00000518898 ATAD2BQ9ULI0 1458 aa10.61□□□□□ -0.71
GTF2H2-206ENST00000518898 SUPT5HO00267 1087 aaKnown RBP10.6□□□□□ -0.71
GTF2H2-206ENST00000518898 PRKAR2AP13861 404 aaKnown RBP10.57□□□□□ -0.72
GTF2H2-206ENST00000518898 NCAPD3P42695 1498 aa10.57□□□□□ -0.72
GTF2H2-206ENST00000518898 SMARCA2P51531 1590 aa10.53□□□□□ -0.72
GTF2H2-206ENST00000518898 MYCNP04198 464 aaPredicted RBP10.52□□□□□ -0.72
GTF2H2-206ENST00000518898 HMGXB3Q12766 1538 aa10.48□□□□□ -0.73
GTF2H2-206ENST00000518898 TOP2AP11388 1531 aaKnown RBP10.48□□□□□ -0.73
GTF2H2-206ENST00000518898 BAZ1BQ9UIG0 1483 aaKnown RBP10.46□□□□□ -0.73
GTF2H2-206ENST00000518898 POTEIP0CG38 1075 aa10.45□□□□□ -0.74
GTF2H2-206ENST00000518898 CCDC88BA6NC98 1476 aa10.42□□□□□ -0.74
GTF2H2-206ENST00000518898 POTEMA6NI47 508 aa10.42□□□□□ -0.74
GTF2H2-206ENST00000518898 PCDH10Q9P2E7 1040 aa10.39□□□□□ -0.75
GTF2H2-206ENST00000518898 SPDYE1Q8NFV5 336 aaPredicted RBP10.36□□□□□ -0.75
GTF2H2-206ENST00000518898 POTEGQ6S5H5 508 aa10.35□□□□□ -0.75
GTF2H2-206ENST00000518898 CLEC11AQ9Y240 323 aa10.35□□□□□ -0.75
GTF2H2-206ENST00000518898 CLCN6P51797 869 aa10.34□□□□□ -0.75
GTF2H2-206ENST00000518898 SPDYE2BA6NHP3 402 aa10.3□□□□□ -0.76
GTF2H2-206ENST00000518898 SPDYE6P0CI01 402 aa10.3□□□□□ -0.76
GTF2H2-206ENST00000518898 SPDYE2Q495Y8 402 aa10.3□□□□□ -0.76
GTF2H2-206ENST00000518898 DCBLD2Q96PD2 775 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms