RNA–Protein interactions for RNA: ENST00000518892.1

LARP1-208, Transcript of La ribonucleoprotein domain family member 1, humanhuman

TSL 3

Gene LARP1, Length 399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP1-208ENST00000518892 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.68■■□□□ 1.222e-6■■■■■ 125.8
LARP1-208ENST00000518892 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.24■□□□□ 0.679e-8■■■■■ 90.6
LARP1-208ENST00000518892 SF3B1O75533 1304 aaKnown RBP eCLIP23.14■■□□□ 1.33e-6■■■■■ 80.6
LARP1-208ENST00000518892 HNRNPKP61978 463 aaKnown RBP eCLIP21.26■□□□□ 0.992e-21■■■■■ 70.3
LARP1-208ENST00000518892 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.04■□□□□ 0.86e-7■■■■■ 50.8
LARP1-208ENST00000518892 PCBP2Q15366 365 aaKnown RBP eCLIP20.07■□□□□ 0.82e-7■■■■■ 37.5
LARP1-208ENST00000518892 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.04■■□□□ 1.121e-6■■■■■ 34.5
LARP1-208ENST00000518892 GTF2F1P35269 517 aaKnown RBP eCLIP23.37■■□□□ 1.336e-7■■■■■ 30.7
LARP1-208ENST00000518892 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.79■□□□□ 0.764e-9■■■■■ 28.3
LARP1-208ENST00000518892 HNRNPMP52272 730 aaKnown RBP eCLIP33.51■■■□□ 2.952e-8■■■■■ 27.3
LARP1-208ENST00000518892 AQRO60306 1485 aaKnown RBP eCLIP37.37■■■■□ 3.571e-6■■■■□ 26.1
LARP1-208ENST00000518892 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.84■□□□□ 0.937e-9■■■■□ 25.9
LARP1-208ENST00000518892 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.96■■□□□ 1.592e-6■■■■□ 25.6
LARP1-208ENST00000518892 FUSP35637 526 aaKnown RBP eCLIP14.16□□□□□ -0.142e-7■■■■□ 25.2
LARP1-208ENST00000518892 NONOQ15233 471 aaKnown RBP eCLIP24.12■■□□□ 1.453e-7■■■■□ 25
LARP1-208ENST00000518892 DDX6P26196 483 aaKnown RBP eCLIP22.55■■□□□ 1.23e-7■■■■□ 23.9
LARP1-208ENST00000518892 EWSR1Q01844 656 aaKnown RBP eCLIP15.52■□□□□ 0.088e-8■■■■□ 23.1
LARP1-208ENST00000518892 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.61■□□□□ 0.896e-6■■■■□ 22.9
LARP1-208ENST00000518892 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.66■■■□□ 2.826e-9■■■■□ 22
LARP1-208ENST00000518892 FKBP4Q02790 459 aaKnown RBP eCLIP27.14■■□□□ 1.943e-6■■■■□ 21.3
LARP1-208ENST00000518892 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.03■■□□□ 1.121e-10■■■■□ 20
LARP1-208ENST00000518892 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.82■■□□□ 1.246e-9■■■■□ 19.9
LARP1-208ENST00000518892 EIF4G2P78344 907 aaKnown RBP eCLIP29.73■■■□□ 2.352e-8■■■■□ 19.7
LARP1-208ENST00000518892 ILF3Q12906 894 aaKnown RBP eCLIP21.04■□□□□ 0.965e-9■■■□□ 18.8
LARP1-208ENST00000518892 TROVE2P10155 538 aaKnown RBP eCLIP19.03■□□□□ 0.645e-9■■■□□ 17.3
LARP1-208ENST00000518892 WRNQ14191 1432 aaPredicted RBP eCLIP37.29■■■■□ 3.569e-7■■■□□ 17.2
LARP1-208ENST00000518892 SFPQP23246 707 aaKnown RBP eCLIP23.62■■□□□ 1.372e-6■■■□□ 17.2
LARP1-208ENST00000518892 PRPF4O43172 522 aaKnown RBP eCLIP20.13■□□□□ 0.812e-6■■■□□ 16.8
LARP1-208ENST00000518892 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.49■■□□□ 1.356e-7■■■□□ 16.5
LARP1-208ENST00000518892 LSM11P83369 360 aaKnown RBP eCLIP18.63■□□□□ 0.575e-7■■■□□ 16.2
LARP1-208ENST00000518892 HNRNPLP14866 589 aaKnown RBP eCLIP22.11■■□□□ 1.131e-12■■■□□ 15.3
LARP1-208ENST00000518892 TIA1P31483 386 aaKnown RBP eCLIP19.7■□□□□ 0.743e-7■■■□□ 15.2
LARP1-208ENST00000518892 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.95■■□□□ 1.584e-7■■□□□ 14
LARP1-208ENST00000518892 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.31■■□□□ 1.641e-7■■□□□ 13.8
LARP1-208ENST00000518892 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.05■■□□□ 1.128e-12■■□□□ 13
LARP1-208ENST00000518892 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.27■■■■□ 3.082e-9■■□□□ 12.8
LARP1-208ENST00000518892 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.76■□□□□ 0.431e-7■■□□□ 12.7
LARP1-208ENST00000518892 AKAP1Q92667 903 aaKnown RBP eCLIP18.6■□□□□ 0.571e-6■■□□□ 12.7
LARP1-208ENST00000518892 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.65■□□□□ 0.743e-6■■□□□ 12.6
LARP1-208ENST00000518892 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.73■■□□□ 1.713e-6■■□□□ 12.6
LARP1-208ENST00000518892 AARSP49588 968 aaKnown RBP eCLIP23.05■■□□□ 1.281e-6■■□□□ 12.5
LARP1-208ENST00000518892 DDX3XO00571 662 aaKnown RBP eCLIP21.94■■□□□ 1.12e-16■■□□□ 12.3
LARP1-208ENST00000518892 KHSRPQ92945 711 aaKnown RBP eCLIP23.06■■□□□ 1.286e-6■■□□□ 12.2
LARP1-208ENST00000518892 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.89■■□□□ 1.415e-7■■□□□ 11.7
LARP1-208ENST00000518892 FMR1Q06787 632 aaKnown RBP eCLIP26.51■■□□□ 1.835e-11■□□□□ 11.3
LARP1-208ENST00000518892 RBFOX2O43251 390 aaKnown RBP eCLIP16.46■□□□□ 0.237e-8■□□□□ 11
LARP1-208ENST00000518892 NKRFO15226 690 aaKnown RBP eCLIP24.48■■□□□ 1.512e-6■□□□□ 11
LARP1-208ENST00000518892 RBM5P52756 815 aaKnown RBP eCLIP26.22■■□□□ 1.793e-7■□□□□ 10.7
LARP1-208ENST00000518892 FXR2P51116 673 aaKnown RBP eCLIP23.75■■□□□ 1.396e-8■□□□□ 10.2
LARP1-208ENST00000518892 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.81■■□□□ 1.088e-8■□□□□ 9.7
LARP1-208ENST00000518892 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.75■□□□□ 0.915e-7■□□□□ 9.7
LARP1-208ENST00000518892 RPS3P23396 243 aaKnown RBP eCLIP20.69■□□□□ 0.91e-6■□□□□ 9.7
LARP1-208ENST00000518892 SRSF1Q07955 248 aaKnown RBP eCLIP19.79■□□□□ 0.768e-9■□□□□ 9
LARP1-208ENST00000518892 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.71■■□□□ 1.714e-9■□□□□ 8.7
LARP1-208ENST00000518892 TAF15Q92804 592 aaKnown RBP eCLIP17.32■□□□□ 0.369e-6■□□□□ 8.1
Retrieved 55 of 55 RNA–protein pairs in 18.9 ms