RNA–Protein interactions for RNA: ENST00000518875.5

RPS20-202, Transcript of ribosomal protein S20, humanhuman

TSL 2 BASIC

Gene RPS20, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS20-202ENST00000518875 NOLC1Q14978 699 aaKnown RBP eCLIP7.89□□□□□ -1.151e-323■■■■■ 136.5
RPS20-202ENST00000518875 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.57□□□□□ -1.29e-8■■■■■ 86.3
RPS20-202ENST00000518875 EFTUD2Q15029 972 aaKnown RBP eCLIP6.81□□□□□ -1.327e-14■■■■■ 59.3
RPS20-202ENST00000518875 SMNDC1O75940 238 aaKnown RBP eCLIP6.43□□□□□ -1.382e-69■■■■■ 35.4
RPS20-202ENST00000518875 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.19□□□□□ -1.428e-13■■■■■ 33.8
RPS20-202ENST00000518875 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.15□□□□□ -1.262e-12■■■■■ 33
RPS20-202ENST00000518875 SF3B4Q15427 424 aaKnown RBP eCLIP6.62□□□□□ -1.353e-11■■■■■ 27.3
RPS20-202ENST00000518875 NIP7Q9Y221 180 aaKnown RBP eCLIP9.31□□□□□ -0.922e-61■■■■■ 27.2
RPS20-202ENST00000518875 DKC1O60832 514 aaKnown RBP eCLIP8.13□□□□□ -1.111e-323■■■■□ 26.7
RPS20-202ENST00000518875 AQRO60306 1485 aaKnown RBP eCLIP12.56□□□□□ -0.42e-9■■■■□ 23.9
RPS20-202ENST00000518875 PTBP1P26599 531 aaKnown RBP eCLIP5.56□□□□□ -1.521e-20■■■■□ 23.8
RPS20-202ENST00000518875 AATFQ9NY61 560 aaKnown RBP eCLIP8.71□□□□□ -1.028e-21■■■■□ 22.3
RPS20-202ENST00000518875 RBM22Q9NW64 420 aaKnown RBP eCLIP7.22□□□□□ -1.253e-7■■■■□ 22.2
RPS20-202ENST00000518875 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.15□□□□□ -1.11e-16■■■■□ 20.3
RPS20-202ENST00000518875 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.98□□□□□ -1.295e-7■■■■□ 19.7
RPS20-202ENST00000518875 DDX3XO00571 662 aaKnown RBP eCLIP7.36□□□□□ -1.232e-37■■■□□ 16.9
RPS20-202ENST00000518875 PABPC4Q13310 644 aaKnown RBP eCLIP8.66□□□□□ -1.022e-35■■■□□ 16.8
RPS20-202ENST00000518875 KHSRPQ92945 711 aaKnown RBP eCLIP8.43□□□□□ -1.063e-9■■■□□ 16.5
RPS20-202ENST00000518875 G3BP1Q13283 466 aaKnown RBP eCLIP8.89□□□□□ -0.992e-7■■■□□ 15.2
RPS20-202ENST00000518875 RPS3P23396 243 aaKnown RBP eCLIP7.03□□□□□ -1.283e-11■■■□□ 14.9
RPS20-202ENST00000518875 TRA2AQ13595 282 aaKnown RBP eCLIP7.11□□□□□ -1.272e-26■■□□□ 14.2
RPS20-202ENST00000518875 AARSP49588 968 aaKnown RBP eCLIP7.81□□□□□ -1.161e-14■■□□□ 14
RPS20-202ENST00000518875 GPKOWQ92917 476 aaPredicted RBP eCLIP8.23□□□□□ -1.091e-7■■□□□ 13.9
RPS20-202ENST00000518875 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.73□□□□□ -1.333e-25■■□□□ 13.1
RPS20-202ENST00000518875 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.02□□□□□ -1.132e-8■■□□□ 13.1
RPS20-202ENST00000518875 TROVE2P10155 538 aaKnown RBP eCLIP6.48□□□□□ -1.371e-323■■□□□ 13
RPS20-202ENST00000518875 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.98□□□□□ -1.132e-59■■□□□ 12.1
RPS20-202ENST00000518875 LARP4Q71RC2 724 aaKnown RBP eCLIP6.59□□□□□ -1.351e-11■■□□□ 12
RPS20-202ENST00000518875 XRCC6P12956 609 aaKnown RBP eCLIP8.05□□□□□ -1.129e-18■■□□□ 12
RPS20-202ENST00000518875 HLTFQ14527 1009 aaKnown RBP eCLIP7.13□□□□□ -1.273e-7■■□□□ 11.9
RPS20-202ENST00000518875 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.36□□□□□ -1.236e-24■■□□□ 11.6
RPS20-202ENST00000518875 NIPBLQ6KC79 2804 aaeCLIP6.2□□□□□ -1.421e-7■□□□□ 11.1
RPS20-202ENST00000518875 AKAP1Q92667 903 aaKnown RBP eCLIP6.31□□□□□ -1.43e-7■□□□□ 11.1
RPS20-202ENST00000518875 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.56□□□□□ -1.24e-7■□□□□ 10.5
RPS20-202ENST00000518875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.84□□□□□ -0.519e-14■□□□□ 10.5
RPS20-202ENST00000518875 YBX3P16989 372 aaKnown RBP eCLIP9.33□□□□□ -0.923e-23■□□□□ 10.4
RPS20-202ENST00000518875 SUB1P53999 127 aaKnown RBP eCLIP5.49□□□□□ -1.531e-9■□□□□ 10.4
RPS20-202ENST00000518875 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.56□□□□□ -0.561e-70■□□□□ 10.3
RPS20-202ENST00000518875 ZRANB2O95218 330 aaKnown RBP eCLIP7.23□□□□□ -1.252e-32■□□□□ 10.3
RPS20-202ENST00000518875 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.01□□□□□ -1.291e-58■□□□□ 10.1
RPS20-202ENST00000518875 DDX21Q9NR30 783 aaKnown RBP eCLIP9.32□□□□□ -0.922e-29■□□□□ 9.6
RPS20-202ENST00000518875 EIF3GO75821 320 aaKnown RBP eCLIP5.03□□□□□ -1.65e-9■□□□□ 9.5
RPS20-202ENST00000518875 RBM15Q96T37 977 aaKnown RBP eCLIP7.18□□□□□ -1.269e-16■□□□□ 9.2
RPS20-202ENST00000518875 PUM1Q14671 1186 aaKnown RBP eCLIP7.4□□□□□ -1.222e-13■□□□□ 9.2
RPS20-202ENST00000518875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.09□□□□□ -0.631e-7■□□□□ 9
RPS20-202ENST00000518875 DDX6P26196 483 aaKnown RBP eCLIP7.7□□□□□ -1.181e-34■□□□□ 8.9
RPS20-202ENST00000518875 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.65□□□□□ -1.342e-34■□□□□ 8.8
RPS20-202ENST00000518875 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.62□□□□□ -1.192e-16■□□□□ 8.6
RPS20-202ENST00000518875 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.74□□□□□ -1.331e-14■□□□□ 8.1
Retrieved 49 of 49 RNA–protein pairs in 19.3 ms