RNA–Protein interactions for RNA: ENST00000518762.1

PCM1-207, Transcript of pericentriolar material 1, humanhuman

TSL 4

Gene PCM1, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-207ENST00000518762 AEBP2Q6ZN18 517 aaPredicted RBP19.18■□□□□ 0.66
PCM1-207ENST00000518762 CHIC1Q5VXU3 224 aa18.03■□□□□ 0.48
PCM1-207ENST00000518762 SENP3Q9H4L4 574 aaPredicted RBP16.54■□□□□ 0.24
PCM1-207ENST00000518762 PHF23Q9BUL5 403 aaPredicted RBP16.2■□□□□ 0.18
PCM1-207ENST00000518762 FOXD1Q16676 465 aa15.4■□□□□ 0.06
PCM1-207ENST00000518762 POTEDQ86YR6 584 aa15.02■□□□□ -0
PCM1-207ENST00000518762 MSH5O43196 834 aa14.68□□□□□ -0.06
PCM1-207ENST00000518762 PIAS4Q8N2W9 510 aaPredicted RBP14.3□□□□□ -0.12
PCM1-207ENST00000518762 PLPPR3Q6T4P5 718 aa14.08□□□□□ -0.16
PCM1-207ENST00000518762 PPP6R1Q9UPN7 881 aa14□□□□□ -0.17
PCM1-207ENST00000518762 ADRA2BP18089 450 aa13.93□□□□□ -0.18
PCM1-207ENST00000518762 DMRT2Q9Y5R5 561 aa13.03□□□□□ -0.32
PCM1-207ENST00000518762 MAPK8IP2Q13387 824 aaPredicted RBP12.91□□□□□ -0.34
PCM1-207ENST00000518762 SCAF1Q9H7N4 1312 aaKnown RBP12.88□□□□□ -0.35
PCM1-207ENST00000518762 CACNB1Q02641 598 aaPredicted RBP12.81□□□□□ -0.36
PCM1-207ENST00000518762 DCAF8L1A6NGE4 600 aa12.46□□□□□ -0.41
PCM1-207ENST00000518762 RNF39Q9H2S5 420 aa12.44□□□□□ -0.42
PCM1-207ENST00000518762 HOXD11P31277 338 aaPredicted RBP12.37□□□□□ -0.43
PCM1-207ENST00000518762 C1QBPQ07021 282 aaKnown RBP12.27□□□□□ -0.45
PCM1-207ENST00000518762 PPP4R3CPQ6ZMV5 832 aa12.24□□□□□ -0.45
PCM1-207ENST00000518762 RNF216Q9NWF9 866 aaPredicted RBP12.17□□□□□ -0.46
PCM1-207ENST00000518762 CNKSR2Q8WXI2 1034 aa12.15□□□□□ -0.46
PCM1-207ENST00000518762 DNAJC5BQ9UF47 199 aa12.12□□□□□ -0.47
PCM1-207ENST00000518762 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.77□□□□□ -0.534e-9■□□□□ 10.6
PCM1-207ENST00000518762 POTEHQ6S545 545 aa11.7□□□□□ -0.54
PCM1-207ENST00000518762 NCBP3Q53F19 620 aaKnown RBP11.69□□□□□ -0.54
PCM1-207ENST00000518762 DSG3P32926 999 aa11.48□□□□□ -0.57
PCM1-207ENST00000518762 NPM3O75607 178 aaKnown RBP11.45□□□□□ -0.58
PCM1-207ENST00000518762 U3KPZ7 1027 aaPredicted RBP11.45□□□□□ -0.58
PCM1-207ENST00000518762 CAPN15O75808 1086 aa11.43□□□□□ -0.58
PCM1-207ENST00000518762 SPINK5Q9NQ38 1064 aaPredicted RBP11.39□□□□□ -0.59
PCM1-207ENST00000518762 APLP2Q06481 763 aa11.21□□□□□ -0.61
PCM1-207ENST00000518762 ZNF219Q9P2Y4 722 aaPredicted RBP11.17□□□□□ -0.62
PCM1-207ENST00000518762 TRHP20396 242 aaPredicted RBP11.12□□□□□ -0.63
PCM1-207ENST00000518762 ABCB7O75027 752 aa11.08□□□□□ -0.64
PCM1-207ENST00000518762 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.07□□□□□ -0.64
PCM1-207ENST00000518762 HNRNPUL2Q1KMD3 747 aaKnown RBP11.07□□□□□ -0.64
PCM1-207ENST00000518762 SLC4A2P04920 1241 aa11.04□□□□□ -0.64
PCM1-207ENST00000518762 RBM42Q9BTD8 480 aaKnown RBP11.04□□□□□ -0.64
PCM1-207ENST00000518762 SAMD1Q6SPF0 538 aaPredicted RBP10.96□□□□□ -0.65
PCM1-207ENST00000518762 CHRDL2Q6WN34 429 aa10.92□□□□□ -0.66
PCM1-207ENST00000518762 KCNA4P22459 653 aa10.81□□□□□ -0.68
PCM1-207ENST00000518762 SP7Q8TDD2 431 aaPredicted RBP10.76□□□□□ -0.69
PCM1-207ENST00000518762 POLA2Q14181 598 aa10.72□□□□□ -0.69
PCM1-207ENST00000518762 MYCNP04198 464 aaPredicted RBP10.66□□□□□ -0.7
PCM1-207ENST00000518762 AKT1S1Q96B36 256 aa10.66□□□□□ -0.7
PCM1-207ENST00000518762 ZBTB12Q9Y330 459 aaPredicted RBP10.58□□□□□ -0.72
PCM1-207ENST00000518762 PIP4P2Q8N4L2 257 aa10.54□□□□□ -0.72
PCM1-207ENST00000518762 REM2Q8IYK8 340 aaPredicted RBP10.51□□□□□ -0.73
PCM1-207ENST00000518762 HAX1O00165 279 aa10.47□□□□□ -0.73
PCM1-207ENST00000518762 FXR2P51116 673 aaKnown RBP eCLIP10.43□□□□□ -0.743e-7■■■■□ 20
PCM1-207ENST00000518762 PITPNM1O00562 1244 aa10.4□□□□□ -0.74
PCM1-207ENST00000518762 OSCARQ8IYS5 282 aa10.4□□□□□ -0.74
PCM1-207ENST00000518762 ATF5Q9Y2D1 282 aaPredicted RBP10.34□□□□□ -0.75
PCM1-207ENST00000518762 FOXD4L1Q9NU39 408 aa10.29□□□□□ -0.76
PCM1-207ENST00000518762 SLC24A1O60721 1099 aa10.24□□□□□ -0.77
PCM1-207ENST00000518762 EVX2Q03828 476 aa10.24□□□□□ -0.77
PCM1-207ENST00000518762 SPDYE2BA6NHP3 402 aa10.18□□□□□ -0.78
PCM1-207ENST00000518762 SPDYE6P0CI01 402 aa10.18□□□□□ -0.78
PCM1-207ENST00000518762 SPDYE2Q495Y8 402 aa10.18□□□□□ -0.78
PCM1-207ENST00000518762 SLC4A1APQ9BWU0 796 aaKnown RBP10.14□□□□□ -0.79
PCM1-207ENST00000518762 PRKAR2AP13861 404 aaKnown RBP10.13□□□□□ -0.79
PCM1-207ENST00000518762 C19orf67A6NJJ6 358 aa10.11□□□□□ -0.79
PCM1-207ENST00000518762 SPDYE1Q8NFV5 336 aaPredicted RBP10.11□□□□□ -0.79
PCM1-207ENST00000518762 FBLN2P98095 1184 aa10.08□□□□□ -0.8
PCM1-207ENST00000518762 LHX8Q68G74 356 aa10.07□□□□□ -0.8
PCM1-207ENST00000518762 GABBR2O75899 941 aa10.05□□□□□ -0.8
PCM1-207ENST00000518762 ATXN8OSP0DMR3 200 aa10.05□□□□□ -0.8
PCM1-207ENST00000518762 CLEC11AQ9Y240 323 aa10.05□□□□□ -0.8
PCM1-207ENST00000518762 EHMT2Q96KQ7 1210 aa10.02□□□□□ -0.81
PCM1-207ENST00000518762 SSUH2Q9Y2M2 353 aa9.97□□□□□ -0.81
PCM1-207ENST00000518762 ZNF692Q9BU19 519 aaPredicted RBP9.93□□□□□ -0.82
PCM1-207ENST00000518762 ZBTB22O15209 634 aa9.9□□□□□ -0.82
PCM1-207ENST00000518762 MKRN4PQ13434 485 aaPredicted RBP9.87□□□□□ -0.83
PCM1-207ENST00000518762 CHADLQ6NUI6 762 aa9.87□□□□□ -0.83
PCM1-207ENST00000518762 CLCN6P51797 869 aa9.86□□□□□ -0.83
PCM1-207ENST00000518762 PRR29P0C7W0 189 aa9.85□□□□□ -0.83
PCM1-207ENST00000518762 POTEIP0CG38 1075 aa9.8□□□□□ -0.84
PCM1-207ENST00000518762 CD44P16070 742 aaKnown RBP9.8□□□□□ -0.84
PCM1-207ENST00000518762 PLSCR2Q9NRY7 297 aa9.78□□□□□ -0.84
PCM1-207ENST00000518762 PABPN1Q86U42 306 aaKnown RBP eCLIP9.77□□□□□ -0.85
PCM1-207ENST00000518762 FARP1Q9Y4F1 1045 aaPredicted RBP9.74□□□□□ -0.85
PCM1-207ENST00000518762 DCBLD2Q96PD2 775 aa9.71□□□□□ -0.86
PCM1-207ENST00000518762 ZNF579Q8NAF0 562 aaKnown RBP9.66□□□□□ -0.86
PCM1-207ENST00000518762 ZRANB1Q9UGI0 708 aa9.57□□□□□ -0.88
PCM1-207ENST00000518762 OTUD5Q96G74 571 aa9.55□□□□□ -0.88
PCM1-207ENST00000518762 POTEMA6NI47 508 aa9.51□□□□□ -0.89
PCM1-207ENST00000518762 GALR2O43603 387 aaPredicted RBP9.51□□□□□ -0.89
PCM1-207ENST00000518762 CSRNP3Q8WYN3 585 aa9.51□□□□□ -0.89
PCM1-207ENST00000518762 RTN4Q9NQC3 1192 aaKnown RBP9.5□□□□□ -0.89
PCM1-207ENST00000518762 STAG3Q9UJ98 1225 aa9.48□□□□□ -0.89
PCM1-207ENST00000518762 PAK3O75914 559 aaPredicted RBP9.47□□□□□ -0.89
PCM1-207ENST00000518762 CREBZFQ9NS37 354 aa9.47□□□□□ -0.89
PCM1-207ENST00000518762 POTEB2H3BUK9 544 aa9.46□□□□□ -0.9
PCM1-207ENST00000518762 POTEGQ6S5H5 508 aa9.46□□□□□ -0.9
PCM1-207ENST00000518762 PCDH10Q9P2E7 1040 aa9.46□□□□□ -0.9
PCM1-207ENST00000518762 PHF12Q96QT6 1004 aa9.38□□□□□ -0.91
PCM1-207ENST00000518762 NPM1P06748 294 aaKnown RBP eCLIP9.35□□□□□ -0.91
PCM1-207ENST00000518762 AMER1Q5JTC6 1135 aaPredicted RBP9.34□□□□□ -0.91
PCM1-207ENST00000518762 MAMSTRQ6ZN01 415 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms