RNA–Protein interactions for RNA: ENST00000518288.5

ARHGEF10-205, Transcript of Rho guanine nucleotide exchange factor 10, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF10, Length 5,648 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF10-205ENST00000518288 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.88□□□□□ -0.032e-7■■■■■ 197.3
ARHGEF10-205ENST00000518288 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.14□□□□□ -0.478e-7■■■■■ 170.8
ARHGEF10-205ENST00000518288 SF3B1O75533 1304 aaKnown RBP eCLIP12.65□□□□□ -0.383e-6■■■■■ 168.7
ARHGEF10-205ENST00000518288 AARSP49588 968 aaKnown RBP eCLIP12.91□□□□□ -0.346e-7■■■■■ 74.4
ARHGEF10-205ENST00000518288 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.76□□□□□ -0.375e-7■■■■■ 72.2
ARHGEF10-205ENST00000518288 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.56□□□□□ -0.46e-7■■■■■ 64
ARHGEF10-205ENST00000518288 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.1□□□□□ -0.315e-7■■■■■ 52.9
ARHGEF10-205ENST00000518288 EFTUD2Q15029 972 aaKnown RBP eCLIP12.89□□□□□ -0.352e-6■■■■■ 52
ARHGEF10-205ENST00000518288 FUSP35637 526 aaKnown RBP eCLIP9.61□□□□□ -0.872e-13■■■■■ 47.4
ARHGEF10-205ENST00000518288 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.66■□□□□ 0.12e-6■■■■■ 45.3
ARHGEF10-205ENST00000518288 ZRANB2O95218 330 aaKnown RBP eCLIP13.13□□□□□ -0.311e-6■■■■■ 44.9
ARHGEF10-205ENST00000518288 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.98□□□□□ -0.331e-6■■■■■ 44.9
ARHGEF10-205ENST00000518288 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.79□□□□□ -0.529e-7■■■■■ 41.1
ARHGEF10-205ENST00000518288 DDX6P26196 483 aaKnown RBP eCLIP12.39□□□□□ -0.433e-6■■■■■ 38.6
ARHGEF10-205ENST00000518288 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.77□□□□□ -0.053e-6■■■■■ 36.7
ARHGEF10-205ENST00000518288 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.44□□□□□ -0.262e-6■■■■■ 34.6
ARHGEF10-205ENST00000518288 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.74□□□□□ -0.535e-37■■■■■ 33.5
ARHGEF10-205ENST00000518288 PUM1Q14671 1186 aaKnown RBP eCLIP12.01□□□□□ -0.499e-7■■■■■ 33.1
ARHGEF10-205ENST00000518288 XRCC6P12956 609 aaKnown RBP eCLIP13.72□□□□□ -0.216e-7■■■■■ 32.2
ARHGEF10-205ENST00000518288 AKAP1Q92667 903 aaKnown RBP eCLIP11.82□□□□□ -0.526e-7■■■■■ 32.1
ARHGEF10-205ENST00000518288 EWSR1Q01844 656 aaKnown RBP eCLIP10.65□□□□□ -0.72e-6■■■■■ 27.1
ARHGEF10-205ENST00000518288 ZNF622Q969S3 477 aaKnown RBP eCLIP14.34□□□□□ -0.112e-6■■■■■ 26.8
ARHGEF10-205ENST00000518288 EIF4G2P78344 907 aaKnown RBP eCLIP16.56■□□□□ 0.242e-7■■■■□ 26.2
ARHGEF10-205ENST00000518288 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.67□□□□□ -1.022e-6■■■■□ 25.3
ARHGEF10-205ENST00000518288 AQRO60306 1485 aaKnown RBP eCLIP15.74■□□□□ 0.112e-6■■■■□ 25.3
ARHGEF10-205ENST00000518288 HNRNPMP52272 730 aaKnown RBP eCLIP15.87■□□□□ 0.132e-6■■■■□ 23.1
ARHGEF10-205ENST00000518288 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.1□□□□□ -0.151e-6■■■■□ 20.8
ARHGEF10-205ENST00000518288 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.11□□□□□ -0.313e-9■■■□□ 18.5
ARHGEF10-205ENST00000518288 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.09□□□□□ -0.472e-6■■■□□ 18
ARHGEF10-205ENST00000518288 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.86□□□□□ -0.031e-6■■■□□ 15
ARHGEF10-205ENST00000518288 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.45■□□□□ 0.062e-8■■□□□ 13.8
ARHGEF10-205ENST00000518288 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.89□□□□□ -0.351e-6■■□□□ 12
ARHGEF10-205ENST00000518288 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.26□□□□□ -0.451e-6■■□□□ 11.9
ARHGEF10-205ENST00000518288 ZC3H11AO75152 810 aaKnown RBP eCLIP13.02□□□□□ -0.335e-6■□□□□ 9.7
Retrieved 34 of 34 RNA–protein pairs in 36.5 ms