RNA–Protein interactions for RNA: ENST00000518163.5

AF279873.4-201, humanhuman

TSL 3

Gene AF279873.4, Length 411 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF279873.4-201ENST00000518163 AEBP2Q6ZN18 517 aaPredicted RBP25.82■■□□□ 1.72
AF279873.4-201ENST00000518163 CHIC1Q5VXU3 224 aa24.94■■□□□ 1.58
AF279873.4-201ENST00000518163 SENP3Q9H4L4 574 aaPredicted RBP22.01■■□□□ 1.11
AF279873.4-201ENST00000518163 PHF23Q9BUL5 403 aaPredicted RBP21.96■■□□□ 1.11
AF279873.4-201ENST00000518163 FOXD1Q16676 465 aa20.54■□□□□ 0.88
AF279873.4-201ENST00000518163 PLPPR3Q6T4P5 718 aa20.3■□□□□ 0.84
AF279873.4-201ENST00000518163 PPP6R1Q9UPN7 881 aa19.32■□□□□ 0.68
AF279873.4-201ENST00000518163 ADRA2BP18089 450 aa19.29■□□□□ 0.68
AF279873.4-201ENST00000518163 MSH5O43196 834 aa19.22■□□□□ 0.67
AF279873.4-201ENST00000518163 PIAS4Q8N2W9 510 aaPredicted RBP19.17■□□□□ 0.66
AF279873.4-201ENST00000518163 POTEDQ86YR6 584 aa18.86■□□□□ 0.61
AF279873.4-201ENST00000518163 PPP4R3CPQ6ZMV5 832 aa17.9■□□□□ 0.46
AF279873.4-201ENST00000518163 KCNA4P22459 653 aa17.64■□□□□ 0.41
AF279873.4-201ENST00000518163 SCAF1Q9H7N4 1312 aaKnown RBP17.64■□□□□ 0.41
AF279873.4-201ENST00000518163 MAPK8IP2Q13387 824 aaPredicted RBP17.57■□□□□ 0.4
AF279873.4-201ENST00000518163 DMRT2Q9Y5R5 561 aa17.46■□□□□ 0.39
AF279873.4-201ENST00000518163 NCBP3Q53F19 620 aaKnown RBP17.45■□□□□ 0.38
AF279873.4-201ENST00000518163 CNKSR2Q8WXI2 1034 aa17.37■□□□□ 0.37
AF279873.4-201ENST00000518163 NPM3O75607 178 aaKnown RBP17.23■□□□□ 0.35
AF279873.4-201ENST00000518163 RNF216Q9NWF9 866 aaPredicted RBP17.01■□□□□ 0.31
AF279873.4-201ENST00000518163 HOXD11P31277 338 aaPredicted RBP16.92■□□□□ 0.3
AF279873.4-201ENST00000518163 SLC4A1APQ9BWU0 796 aaKnown RBP16.8■□□□□ 0.28
AF279873.4-201ENST00000518163 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
AF279873.4-201ENST00000518163 DCAF8L1A6NGE4 600 aa16.74■□□□□ 0.27
AF279873.4-201ENST00000518163 CACNB1Q02641 598 aaPredicted RBP16.53■□□□□ 0.24
AF279873.4-201ENST00000518163 EHMT2Q96KQ7 1210 aa16.46■□□□□ 0.23
AF279873.4-201ENST00000518163 RNF39Q9H2S5 420 aa16.41■□□□□ 0.22
AF279873.4-201ENST00000518163 ZBTB22O15209 634 aa16.25■□□□□ 0.19
AF279873.4-201ENST00000518163 SLC4A2P04920 1241 aa16.24■□□□□ 0.19
AF279873.4-201ENST00000518163 CSRNP3Q8WYN3 585 aa16.24■□□□□ 0.19
AF279873.4-201ENST00000518163 FOXD4L1Q9NU39 408 aa16.2■□□□□ 0.18
AF279873.4-201ENST00000518163 C1QBPQ07021 282 aaKnown RBP16.16■□□□□ 0.18
AF279873.4-201ENST00000518163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.09■□□□□ 0.17
AF279873.4-201ENST00000518163 MYCNP04198 464 aaPredicted RBP15.91■□□□□ 0.14
AF279873.4-201ENST00000518163 U3KPZ7 1027 aaPredicted RBP15.88■□□□□ 0.13
AF279873.4-201ENST00000518163 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.69■□□□□ 0.1
AF279873.4-201ENST00000518163 HNRNPUL2Q1KMD3 747 aaKnown RBP15.69■□□□□ 0.1
AF279873.4-201ENST00000518163 SAMD1Q6SPF0 538 aaPredicted RBP15.65■□□□□ 0.1
AF279873.4-201ENST00000518163 ATXN8OSP0DMR3 200 aa15.62■□□□□ 0.09
AF279873.4-201ENST00000518163 APLP2Q06481 763 aa15.49■□□□□ 0.07
AF279873.4-201ENST00000518163 ATF5Q9Y2D1 282 aaPredicted RBP15.48■□□□□ 0.07
AF279873.4-201ENST00000518163 SPINK5Q9NQ38 1064 aaPredicted RBP15.46■□□□□ 0.07
AF279873.4-201ENST00000518163 CAPN15O75808 1086 aa15.42■□□□□ 0.06
AF279873.4-201ENST00000518163 DSG3P32926 999 aa15.35■□□□□ 0.05
AF279873.4-201ENST00000518163 ZNF219Q9P2Y4 722 aaPredicted RBP15.27■□□□□ 0.04
AF279873.4-201ENST00000518163 TRHP20396 242 aaPredicted RBP15.24■□□□□ 0.03
AF279873.4-201ENST00000518163 ABCB7O75027 752 aa15.07■□□□□ 0
AF279873.4-201ENST00000518163 POLA2Q14181 598 aa15.04■□□□□ -0
AF279873.4-201ENST00000518163 MKRN4PQ13434 485 aaPredicted RBP14.82□□□□□ -0.04
AF279873.4-201ENST00000518163 ZBTB12Q9Y330 459 aaPredicted RBP14.82□□□□□ -0.04
AF279873.4-201ENST00000518163 FBLN2P98095 1184 aa14.79□□□□□ -0.04
AF279873.4-201ENST00000518163 POTEHQ6S545 545 aa14.77□□□□□ -0.05
AF279873.4-201ENST00000518163 FKBP8Q14318 412 aa14.66□□□□□ -0.06
AF279873.4-201ENST00000518163 RBM42Q9BTD8 480 aaKnown RBP14.63□□□□□ -0.07
AF279873.4-201ENST00000518163 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
AF279873.4-201ENST00000518163 SPDYE4A6NLX3 237 aa14.53□□□□□ -0.08
AF279873.4-201ENST00000518163 SPDYE2BA6NHP3 402 aa14.43□□□□□ -0.1
AF279873.4-201ENST00000518163 SPDYE6P0CI01 402 aa14.43□□□□□ -0.1
AF279873.4-201ENST00000518163 SPDYE2Q495Y8 402 aa14.43□□□□□ -0.1
AF279873.4-201ENST00000518163 ZNF692Q9BU19 519 aaPredicted RBP14.37□□□□□ -0.11
AF279873.4-201ENST00000518163 PROM2Q8N271 834 aa14.35□□□□□ -0.11
AF279873.4-201ENST00000518163 SSUH2Q9Y2M2 353 aa14.35□□□□□ -0.11
AF279873.4-201ENST00000518163 CHRDL2Q6WN34 429 aa14.34□□□□□ -0.11
AF279873.4-201ENST00000518163 AKT1S1Q96B36 256 aa14.3□□□□□ -0.12
AF279873.4-201ENST00000518163 PABPN1Q86U42 306 aaKnown RBP eCLIP14.19□□□□□ -0.14
AF279873.4-201ENST00000518163 REM2Q8IYK8 340 aaPredicted RBP14.17□□□□□ -0.14
AF279873.4-201ENST00000518163 FBXO3Q9UK99 471 aa14.1□□□□□ -0.15
AF279873.4-201ENST00000518163 PITPNM1O00562 1244 aa14.02□□□□□ -0.17
AF279873.4-201ENST00000518163 PIP4P2Q8N4L2 257 aa14.01□□□□□ -0.17
AF279873.4-201ENST00000518163 STAG3Q9UJ98 1225 aa13.98□□□□□ -0.17
AF279873.4-201ENST00000518163 SPDYE1Q8NFV5 336 aaPredicted RBP13.96□□□□□ -0.17
AF279873.4-201ENST00000518163 VASPP50552 380 aaPredicted RBP13.92□□□□□ -0.18
AF279873.4-201ENST00000518163 FXR2P51116 673 aaKnown RBP eCLIP13.91□□□□□ -0.18
AF279873.4-201ENST00000518163 CLEC11AQ9Y240 323 aa13.87□□□□□ -0.19
AF279873.4-201ENST00000518163 SP7Q8TDD2 431 aaPredicted RBP13.81□□□□□ -0.2
AF279873.4-201ENST00000518163 PRR29P0C7W0 189 aa13.77□□□□□ -0.21
AF279873.4-201ENST00000518163 HAX1O00165 279 aa13.75□□□□□ -0.21
AF279873.4-201ENST00000518163 IFNLR1Q8IU57 520 aaPredicted RBP13.74□□□□□ -0.21
AF279873.4-201ENST00000518163 MIER1Q8N108 512 aa13.73□□□□□ -0.21
AF279873.4-201ENST00000518163 PLCD3Q8N3E9 789 aa13.73□□□□□ -0.21
AF279873.4-201ENST00000518163 CREBZFQ9NS37 354 aa13.66□□□□□ -0.22
AF279873.4-201ENST00000518163 PLEKHG5O94827 1062 aa13.65□□□□□ -0.22
AF279873.4-201ENST00000518163 PRKAR2AP13861 404 aaKnown RBP13.65□□□□□ -0.22
AF279873.4-201ENST00000518163 KLHL34Q8N239 644 aa13.61□□□□□ -0.23
AF279873.4-201ENST00000518163 EVX2Q03828 476 aa13.6□□□□□ -0.23
AF279873.4-201ENST00000518163 ZBTB47Q9UFB7 747 aaPredicted RBP13.59□□□□□ -0.23
AF279873.4-201ENST00000518163 AMER1Q5JTC6 1135 aaPredicted RBP13.58□□□□□ -0.24
AF279873.4-201ENST00000518163 MNX1P50219 401 aaPredicted RBP13.55□□□□□ -0.24
AF279873.4-201ENST00000518163 SPOCK2Q92563 424 aa13.55□□□□□ -0.24
AF279873.4-201ENST00000518163 RTN4Q9NQC3 1192 aaKnown RBP13.55□□□□□ -0.24
AF279873.4-201ENST00000518163 CHADLQ6NUI6 762 aa13.53□□□□□ -0.24
AF279873.4-201ENST00000518163 C19orf67A6NJJ6 358 aa13.47□□□□□ -0.25
AF279873.4-201ENST00000518163 FARP1Q9Y4F1 1045 aaPredicted RBP13.43□□□□□ -0.26
AF279873.4-201ENST00000518163 NPM1P06748 294 aaKnown RBP eCLIP13.41□□□□□ -0.26
AF279873.4-201ENST00000518163 NUBP1P53384 320 aa13.41□□□□□ -0.26
AF279873.4-201ENST00000518163 PKD2Q13563 968 aa13.34□□□□□ -0.27
AF279873.4-201ENST00000518163 RASEFQ8IZ41 740 aa13.33□□□□□ -0.28
AF279873.4-201ENST00000518163 FAM212AQ96EL1 285 aa13.29□□□□□ -0.28
AF279873.4-201ENST00000518163 CIZ1Q9ULV3 898 aaPredicted RBP13.29□□□□□ -0.28
AF279873.4-201ENST00000518163 GABBR2O75899 941 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 243.9 ms