RNA–Protein interactions for RNA: ENST00000517292.1

AF279873.3-202, humanhuman

TSL 3

Gene AF279873.3, Length 272 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF279873.3-202ENST00000517292 NISCHQ9Y2I1 1504 aa31.79■■■□□ 2.68
AF279873.3-202ENST00000517292 ABCC9O60706 1549 aa28.78■■■□□ 2.2
AF279873.3-202ENST00000517292 CCDC180Q9P1Z9 1646 aa28.64■■■□□ 2.18
AF279873.3-202ENST00000517292 RB1CC1Q8TDY2 1594 aa27.31■■□□□ 1.96
AF279873.3-202ENST00000517292 DNAJC5BQ9UF47 199 aa27.14■■□□□ 1.94
AF279873.3-202ENST00000517292 NACADO15069 1562 aa27.09■■□□□ 1.93
AF279873.3-202ENST00000517292 UNC13AQ9UPW8 1703 aa26.71■■□□□ 1.87
AF279873.3-202ENST00000517292 DCAF8L2P0C7V8 631 aa26.71■■□□□ 1.87
AF279873.3-202ENST00000517292 PABPN1Q86U42 306 aaKnown RBP eCLIP26.7■■□□□ 1.86
AF279873.3-202ENST00000517292 MYO15BQ96JP2 1530 aa26.68■■□□□ 1.86
AF279873.3-202ENST00000517292 BICRAQ9NZM4 1560 aa26.58■■□□□ 1.85
AF279873.3-202ENST00000517292 ZCCHC6Q5VYS8 1495 aaKnown RBP26.36■■□□□ 1.81
AF279873.3-202ENST00000517292 DCAF1Q9Y4B6 1507 aa26.27■■□□□ 1.8
AF279873.3-202ENST00000517292 SHROOM4Q9ULL8 1493 aa26.22■■□□□ 1.79
AF279873.3-202ENST00000517292 SCRIBQ14160 1630 aa26.08■■□□□ 1.77
AF279873.3-202ENST00000517292 CC2D2AQ9P2K1 1620 aa26■■□□□ 1.75
AF279873.3-202ENST00000517292 CECR2Q9BXF3 1484 aa25.96■■□□□ 1.75
AF279873.3-202ENST00000517292 EIF4G1Q04637 1599 aaKnown RBP25.92■■□□□ 1.74
AF279873.3-202ENST00000517292 DNAJC5Q9H3Z4 198 aa25.03■■□□□ 1.6
AF279873.3-202ENST00000517292 NCAPD3P42695 1498 aa25■■□□□ 1.59
AF279873.3-202ENST00000517292 ATAD2BQ9ULI0 1458 aa24.91■■□□□ 1.58
AF279873.3-202ENST00000517292 CUX2O14529 1486 aa24.9■■□□□ 1.58
AF279873.3-202ENST00000517292 SMARCA4P51532 1647 aa24.86■■□□□ 1.57
AF279873.3-202ENST00000517292 HMGXB3Q12766 1538 aa24.85■■□□□ 1.57
AF279873.3-202ENST00000517292 ERCC6Q03468 1493 aa24.84■■□□□ 1.57
AF279873.3-202ENST00000517292 SMARCA2P51531 1590 aa24.82■■□□□ 1.56
AF279873.3-202ENST00000517292 NESP48681 1621 aa24.69■■□□□ 1.54
AF279873.3-202ENST00000517292 BAZ1AQ9NRL2 1556 aaPredicted RBP24.68■■□□□ 1.54
AF279873.3-202ENST00000517292 BAZ1BQ9UIG0 1483 aaKnown RBP24.65■■□□□ 1.54
AF279873.3-202ENST00000517292 PEG3Q9GZU2 1588 aa24.63■■□□□ 1.53
AF279873.3-202ENST00000517292 THOC2Q8NI27 1593 aaKnown RBP24.54■■□□□ 1.52
AF279873.3-202ENST00000517292 MROH2BQ7Z745 1585 aa24.5■■□□□ 1.51
AF279873.3-202ENST00000517292 LAMC3Q9Y6N6 1575 aa24.47■■□□□ 1.51
AF279873.3-202ENST00000517292 KIF21AQ7Z4S6 1674 aa24.37■■□□□ 1.49
AF279873.3-202ENST00000517292 PDS5BQ9NTI5 1447 aa24.3■■□□□ 1.48
AF279873.3-202ENST00000517292 CADPSQ9ULU8 1353 aa24.21■■□□□ 1.47
AF279873.3-202ENST00000517292 WIZO95785 1651 aa24.18■■□□□ 1.46
AF279873.3-202ENST00000517292 MRC2Q9UBG0 1479 aa24.16■■□□□ 1.46
AF279873.3-202ENST00000517292 WDR62O43379 1518 aa24.14■■□□□ 1.45
AF279873.3-202ENST00000517292 CEP164Q9UPV0 1460 aa24■■□□□ 1.43
AF279873.3-202ENST00000517292 FANCD2Q9BXW9 1451 aa23.96■■□□□ 1.43
AF279873.3-202ENST00000517292 CFTRP13569 1480 aa23.93■■□□□ 1.42
AF279873.3-202ENST00000517292 RSF1Q96T23 1441 aaPredicted RBP23.91■■□□□ 1.42
AF279873.3-202ENST00000517292 TOP2AP11388 1531 aaKnown RBP23.89■■□□□ 1.42
AF279873.3-202ENST00000517292 TRIM41Q8WV44 630 aa23.82■■□□□ 1.4
AF279873.3-202ENST00000517292 URB2Q14146 1524 aaKnown RBP23.81■■□□□ 1.4
AF279873.3-202ENST00000517292 PRDM2Q13029 1718 aa23.67■■□□□ 1.38
AF279873.3-202ENST00000517292 OSCARQ8IYS5 282 aa23.61■■□□□ 1.37
AF279873.3-202ENST00000517292 CCDC88BA6NC98 1476 aa23.57■■□□□ 1.36
AF279873.3-202ENST00000517292 ZNF608Q9ULD9 1512 aaPredicted RBP23.54■■□□□ 1.36
AF279873.3-202ENST00000517292 IFT140Q96RY7 1462 aa23.53■■□□□ 1.36
AF279873.3-202ENST00000517292 TOPBP1Q92547 1522 aa23.5■■□□□ 1.35
AF279873.3-202ENST00000517292 RIMBP3CA6NJZ7 1639 aa23.45■■□□□ 1.34
AF279873.3-202ENST00000517292 RIMBP3BA6NNM3 1639 aa23.45■■□□□ 1.34
AF279873.3-202ENST00000517292 RIMBP3Q9UFD9 1639 aa23.45■■□□□ 1.34
AF279873.3-202ENST00000517292 EIF4G3O43432 1585 aaKnown RBP23.43■■□□□ 1.34
AF279873.3-202ENST00000517292 DNMBPQ6XZF7 1577 aa23.41■■□□□ 1.34
AF279873.3-202ENST00000517292 ABCC8Q09428 1581 aa23.37■■□□□ 1.33
AF279873.3-202ENST00000517292 ARHGEF11O15085 1522 aa23.37■■□□□ 1.33
AF279873.3-202ENST00000517292 TARBP1Q13395 1621 aaKnown RBP23.33■■□□□ 1.32
AF279873.3-202ENST00000517292 POLA1P09884 1462 aaPredicted RBP23.26■■□□□ 1.31
AF279873.3-202ENST00000517292 CHD1O14646 1710 aa23.25■■□□□ 1.31
AF279873.3-202ENST00000517292 AQRO60306 1485 aaKnown RBP eCLIP23.25■■□□□ 1.31
AF279873.3-202ENST00000517292 ARAP1Q96P48 1450 aa23.15■■□□□ 1.3
AF279873.3-202ENST00000517292 RAD54L2Q9Y4B4 1467 aa23.15■■□□□ 1.3
AF279873.3-202ENST00000517292 FGD5Q6ZNL6 1462 aa23.08■■□□□ 1.29
AF279873.3-202ENST00000517292 CYB5RLQ6IPT4 315 aa23.07■■□□□ 1.28
AF279873.3-202ENST00000517292 WDR97A6NE52 1622 aa23.07■■□□□ 1.28
AF279873.3-202ENST00000517292 SOGA1O94964 1423 aa23.07■■□□□ 1.28
AF279873.3-202ENST00000517292 SNAPC4Q5SXM2 1469 aa23.06■■□□□ 1.28
AF279873.3-202ENST00000517292 TDRD9Q8NDG6 1382 aaKnown RBP23.06■■□□□ 1.28
AF279873.3-202ENST00000517292 CUX1P39880 1505 aa23.05■■□□□ 1.28
AF279873.3-202ENST00000517292 FBLN2P98095 1184 aa23.04■■□□□ 1.28
AF279873.3-202ENST00000517292 CLASP1Q7Z460 1538 aa23.03■■□□□ 1.28
AF279873.3-202ENST00000517292 MAGI1Q96QZ7 1491 aaPredicted RBP22.98■■□□□ 1.27
AF279873.3-202ENST00000517292 GRIN2BQ13224 1484 aa22.94■■□□□ 1.26
AF279873.3-202ENST00000517292 SYNJ1O43426 1573 aa22.93■■□□□ 1.26
AF279873.3-202ENST00000517292 SYNJ2O15056 1496 aa22.9■■□□□ 1.26
AF279873.3-202ENST00000517292 PBRM1Q86U86 1689 aa22.86■■□□□ 1.25
AF279873.3-202ENST00000517292 CHMP7Q8WUX9 453 aaPredicted RBP22.85■■□□□ 1.25
AF279873.3-202ENST00000517292 TRHP20396 242 aaPredicted RBP22.84■■□□□ 1.25
AF279873.3-202ENST00000517292 ABCA5Q8WWZ7 1642 aa22.83■■□□□ 1.25
AF279873.3-202ENST00000517292 GAPVD1Q14C86 1478 aa22.82■■□□□ 1.24
AF279873.3-202ENST00000517292 ABCA10Q8WWZ4 1543 aa22.81■■□□□ 1.24
AF279873.3-202ENST00000517292 ADAMTS12P58397 1594 aa22.68■■□□□ 1.22
AF279873.3-202ENST00000517292 GRIN2AQ12879 1464 aa22.66■■□□□ 1.22
AF279873.3-202ENST00000517292 ERCC6L2Q5T890 1561 aa22.64■■□□□ 1.22
AF279873.3-202ENST00000517292 WRNQ14191 1432 aaPredicted RBP eCLIP22.64■■□□□ 1.21
AF279873.3-202ENST00000517292 NUP160Q12769 1436 aa22.62■■□□□ 1.21
AF279873.3-202ENST00000517292 CEP170Q5SW79 1584 aa22.62■■□□□ 1.21
AF279873.3-202ENST00000517292 BIVM-ERCC5R4GMW8 1640 aa22.61■■□□□ 1.21
AF279873.3-202ENST00000517292 TOP2BQ02880 1626 aa22.6■■□□□ 1.21
AF279873.3-202ENST00000517292 SUPT5HO00267 1087 aaKnown RBP22.56■■□□□ 1.2
AF279873.3-202ENST00000517292 SHROOM2Q13796 1616 aa22.55■■□□□ 1.2
AF279873.3-202ENST00000517292 FHAD1B1AJZ9 1412 aa22.53■■□□□ 1.2
AF279873.3-202ENST00000517292 ERICH3Q5RHP9 1530 aa22.51■■□□□ 1.19
AF279873.3-202ENST00000517292 RUSC2Q8N2Y8 1516 aa22.37■■□□□ 1.17
AF279873.3-202ENST00000517292 PRG4Q92954 1404 aaPredicted RBP22.35■■□□□ 1.17
AF279873.3-202ENST00000517292 KIF13AQ9H1H9 1805 aa22.31■■□□□ 1.16
AF279873.3-202ENST00000517292 AEBP2Q6ZN18 517 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms