RNA–Protein interactions for RNA: ENST00000515799.5

RAI14-228, Transcript of retinoic acid induced 14, humanhuman

TSL 1 (best) BASIC

Gene RAI14, Length 3,486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAI14-228ENST00000515799 NISCHQ9Y2I1 1504 aa13.91□□□□□ -0.18
RAI14-228ENST00000515799 PELP1Q8IZL8 1130 aaKnown RBP12.51□□□□□ -0.41
RAI14-228ENST00000515799 HRCP23327 699 aa12.18□□□□□ -0.46
RAI14-228ENST00000515799 PPARGC1BQ86YN6 1023 aaKnown RBP12.15□□□□□ -0.46
RAI14-228ENST00000515799 MYT1Q01538 1121 aa12.14□□□□□ -0.47
RAI14-228ENST00000515799 SCAF1Q9H7N4 1312 aaKnown RBP11.92□□□□□ -0.5
RAI14-228ENST00000515799 PCGF6Q9BYE7 350 aa11.88□□□□□ -0.51
RAI14-228ENST00000515799 CCDC180Q9P1Z9 1646 aa11.86□□□□□ -0.51
RAI14-228ENST00000515799 SHROOM4Q9ULL8 1493 aa11.86□□□□□ -0.51
RAI14-228ENST00000515799 DCAF8L2P0C7V8 631 aa11.75□□□□□ -0.53
RAI14-228ENST00000515799 ZCCHC6Q5VYS8 1495 aaKnown RBP11.73□□□□□ -0.53
RAI14-228ENST00000515799 SUPT5HO00267 1087 aaKnown RBP11.59□□□□□ -0.55
RAI14-228ENST00000515799 BCL11AQ9H165 835 aa11.52□□□□□ -0.57
RAI14-228ENST00000515799 PRKCSHP14314 528 aaPredicted RBP11.48□□□□□ -0.57
RAI14-228ENST00000515799 GTF3C3Q9Y5Q9 886 aa11.47□□□□□ -0.57
RAI14-228ENST00000515799 TTBK1Q5TCY1 1321 aaPredicted RBP11.46□□□□□ -0.58
RAI14-228ENST00000515799 NEUROD1Q13562 356 aa11.43□□□□□ -0.58
RAI14-228ENST00000515799 FAM9AQ8IZU1 332 aaPredicted RBP11.41□□□□□ -0.58
RAI14-228ENST00000515799 ACIN1Q9UKV3 1341 aaKnown RBP11.41□□□□□ -0.58
RAI14-228ENST00000515799 DCAF1Q9Y4B6 1507 aa11.38□□□□□ -0.59
RAI14-228ENST00000515799 CENPBP07199 599 aaPredicted RBP11.34□□□□□ -0.59
RAI14-228ENST00000515799 MYO15BQ96JP2 1530 aa11.21□□□□□ -0.61
RAI14-228ENST00000515799 ABCC9O60706 1549 aa11.2□□□□□ -0.62
RAI14-228ENST00000515799 ZEB1P37275 1124 aaPredicted RBP11.19□□□□□ -0.62
RAI14-228ENST00000515799 SCRIBQ14160 1630 aa11.15□□□□□ -0.63
RAI14-228ENST00000515799 YTHDC1Q96MU7 727 aaKnown RBP11.14□□□□□ -0.63
RAI14-228ENST00000515799 TRIM26Q12899 539 aaPredicted RBP11.13□□□□□ -0.63
RAI14-228ENST00000515799 CHIC1Q5VXU3 224 aa11.13□□□□□ -0.63
RAI14-228ENST00000515799 ERICH6Q7L0X2 663 aa11.1□□□□□ -0.63
RAI14-228ENST00000515799 ANP32EQ9BTT0 268 aa11.07□□□□□ -0.64
RAI14-228ENST00000515799 CSRNP3Q8WYN3 585 aa11.07□□□□□ -0.64
RAI14-228ENST00000515799 NACADO15069 1562 aa11.04□□□□□ -0.64
RAI14-228ENST00000515799 LOC105371045A0A1W2PR82 267 aa11.04□□□□□ -0.64
RAI14-228ENST00000515799 DIEXFQ68CQ4 756 aaKnown RBP10.99□□□□□ -0.65
RAI14-228ENST00000515799 RSF1Q96T23 1441 aaPredicted RBP10.97□□□□□ -0.65
RAI14-228ENST00000515799 RB1CC1Q8TDY2 1594 aa10.9□□□□□ -0.66
RAI14-228ENST00000515799 APLP2Q06481 763 aa10.9□□□□□ -0.66
RAI14-228ENST00000515799 CECR2Q9BXF3 1484 aa10.87□□□□□ -0.67
RAI14-228ENST00000515799 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.82□□□□□ -0.68
RAI14-228ENST00000515799 ANO8Q9HCE9 1232 aaPredicted RBP10.82□□□□□ -0.68
RAI14-228ENST00000515799 CCER1Q8TC90 406 aaPredicted RBP10.81□□□□□ -0.68
RAI14-228ENST00000515799 MROH2BQ7Z745 1585 aa10.81□□□□□ -0.68
RAI14-228ENST00000515799 TRIM41Q8WV44 630 aa10.8□□□□□ -0.68
RAI14-228ENST00000515799 TSHZ2Q9NRE2 1034 aa10.78□□□□□ -0.68
RAI14-228ENST00000515799 EHMT2Q96KQ7 1210 aa10.74□□□□□ -0.69
RAI14-228ENST00000515799 WIZO95785 1651 aa10.73□□□□□ -0.69
RAI14-228ENST00000515799 PABPN1Q86U42 306 aaKnown RBP eCLIP10.71□□□□□ -0.69
RAI14-228ENST00000515799 BAZ1AQ9NRL2 1556 aaPredicted RBP10.71□□□□□ -0.69
RAI14-228ENST00000515799 CCDC136Q96JN2 1154 aa10.71□□□□□ -0.7
RAI14-228ENST00000515799 SUPT16HQ9Y5B9 1047 aaKnown RBP10.68□□□□□ -0.7
RAI14-228ENST00000515799 BCANQ96GW7 911 aa10.67□□□□□ -0.7
RAI14-228ENST00000515799 MIER1Q8N108 512 aa10.66□□□□□ -0.7
RAI14-228ENST00000515799 UNC13AQ9UPW8 1703 aa10.65□□□□□ -0.71
RAI14-228ENST00000515799 SMARCA4P51532 1647 aa10.62□□□□□ -0.71
RAI14-228ENST00000515799 SALL2Q9Y467 1007 aaPredicted RBP10.61□□□□□ -0.71
RAI14-228ENST00000515799 TOP2AP11388 1531 aaKnown RBP10.57□□□□□ -0.72
RAI14-228ENST00000515799 ZNF316A6NFI3 1004 aaPredicted RBP10.56□□□□□ -0.72
RAI14-228ENST00000515799 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.56□□□□□ -0.72
RAI14-228ENST00000515799 BICRAQ9NZM4 1560 aa10.55□□□□□ -0.72
RAI14-228ENST00000515799 CCDC88BA6NC98 1476 aa10.54□□□□□ -0.72
RAI14-228ENST00000515799 RBM19Q9Y4C8 960 aaKnown RBP10.5□□□□□ -0.73
RAI14-228ENST00000515799 EIF5BO60841 1220 aaKnown RBP10.5□□□□□ -0.73
RAI14-228ENST00000515799 DEKP35659 375 aaKnown RBP10.5□□□□□ -0.73
RAI14-228ENST00000515799 SMARCA2P51531 1590 aa10.5□□□□□ -0.73
RAI14-228ENST00000515799 RTN4Q9NQC3 1192 aaKnown RBP10.5□□□□□ -0.73
RAI14-228ENST00000515799 ABCC8Q09428 1581 aa10.47□□□□□ -0.73
RAI14-228ENST00000515799 EIF4G1Q04637 1599 aaKnown RBP10.46□□□□□ -0.74
RAI14-228ENST00000515799 UBE2Q2Q8WVN8 375 aa10.45□□□□□ -0.74
RAI14-228ENST00000515799 MSH5O43196 834 aa10.45□□□□□ -0.74
RAI14-228ENST00000515799 ITGAEP38570 1179 aa10.44□□□□□ -0.74
RAI14-228ENST00000515799 PLEKHG5O94827 1062 aa10.43□□□□□ -0.74
RAI14-228ENST00000515799 SLC24A1O60721 1099 aa10.42□□□□□ -0.74
RAI14-228ENST00000515799 FKBP8Q14318 412 aa10.41□□□□□ -0.74
RAI14-228ENST00000515799 ATAD2BQ9ULI0 1458 aa10.4□□□□□ -0.74
RAI14-228ENST00000515799 BAZ1BQ9UIG0 1483 aaKnown RBP10.4□□□□□ -0.75
RAI14-228ENST00000515799 PEG3Q9GZU2 1588 aa10.38□□□□□ -0.75
RAI14-228ENST00000515799 CLSPNQ9HAW4 1339 aa10.38□□□□□ -0.75
RAI14-228ENST00000515799 NBR1Q14596 966 aa10.38□□□□□ -0.75
RAI14-228ENST00000515799 SOGA1O94964 1423 aa10.35□□□□□ -0.75
RAI14-228ENST00000515799 PKNOX2Q96KN3 472 aa10.35□□□□□ -0.75
RAI14-228ENST00000515799 WRNQ14191 1432 aaPredicted RBP eCLIP10.34□□□□□ -0.75
RAI14-228ENST00000515799 UBTFP17480 764 aaKnown RBP10.34□□□□□ -0.75
RAI14-228ENST00000515799 IL27Q8NEV9 243 aa10.33□□□□□ -0.76
RAI14-228ENST00000515799 NEFLP07196 543 aa10.3□□□□□ -0.76
RAI14-228ENST00000515799 EEA1Q15075 1411 aa10.3□□□□□ -0.76
RAI14-228ENST00000515799 RUSC2Q8N2Y8 1516 aa10.29□□□□□ -0.76
RAI14-228ENST00000515799 PODXL2Q9NZ53 605 aa10.27□□□□□ -0.77
RAI14-228ENST00000515799 MYT1LQ9UL68 1186 aa10.26□□□□□ -0.77
RAI14-228ENST00000515799 CEP162Q5TB80 1403 aa10.26□□□□□ -0.77
RAI14-228ENST00000515799 ERICH6BQ5W0A0 696 aa10.25□□□□□ -0.77
RAI14-228ENST00000515799 TNIKQ9UKE5 1360 aa10.24□□□□□ -0.77
RAI14-228ENST00000515799 SYNJ1O43426 1573 aa10.24□□□□□ -0.77
RAI14-228ENST00000515799 GOLGA3Q08378 1498 aa10.22□□□□□ -0.77
RAI14-228ENST00000515799 NCAPD3P42695 1498 aa10.22□□□□□ -0.77
RAI14-228ENST00000515799 KCNH8Q96L42 1107 aa10.2□□□□□ -0.78
RAI14-228ENST00000515799 RANGAP1P46060 587 aaPredicted RBP10.19□□□□□ -0.78
RAI14-228ENST00000515799 RTL5Q5HYW3 569 aaPredicted RBP10.19□□□□□ -0.78
RAI14-228ENST00000515799 HMGXB3Q12766 1538 aa10.19□□□□□ -0.78
RAI14-228ENST00000515799 TIMELESSQ9UNS1 1208 aa10.18□□□□□ -0.78
RAI14-228ENST00000515799 CEP164Q9UPV0 1460 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms