RNA–Protein interactions for RNA: ENST00000515795.1

FAM20C-205, Transcript of FAM20C, golgi associated secretory pathway kinase, humanhuman

TSL 1 (best)

Gene FAM20C, Length 2,177 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20C-205ENST00000515795 NISCHQ9Y2I1 1504 aa42.44■■■■■ 4.38
FAM20C-205ENST00000515795 CCDC180Q9P1Z9 1646 aa36.26■■■■□ 3.4
FAM20C-205ENST00000515795 SHROOM4Q9ULL8 1493 aa35.87■■■■□ 3.33
FAM20C-205ENST00000515795 ZCCHC6Q5VYS8 1495 aaKnown RBP35.86■■■■□ 3.33
FAM20C-205ENST00000515795 DCAF8L2P0C7V8 631 aa35.13■■■■□ 3.21
FAM20C-205ENST00000515795 SUPT5HO00267 1087 aaKnown RBP35.09■■■■□ 3.21
FAM20C-205ENST00000515795 DCAF1Q9Y4B6 1507 aa34.9■■■■□ 3.18
FAM20C-205ENST00000515795 CHIC1Q5VXU3 224 aa34.05■■■■□ 3.04
FAM20C-205ENST00000515795 MYO15BQ96JP2 1530 aa33.98■■■■□ 3.03
FAM20C-205ENST00000515795 SCRIBQ14160 1630 aa33.84■■■■□ 3.01
FAM20C-205ENST00000515795 ABCC9O60706 1549 aa33.79■■■■□ 3
FAM20C-205ENST00000515795 NACADO15069 1562 aa33.56■■■□□ 2.96
FAM20C-205ENST00000515795 RSF1Q96T23 1441 aaPredicted RBP33.46■■■□□ 2.95
FAM20C-205ENST00000515795 RB1CC1Q8TDY2 1594 aa33.1■■■□□ 2.89
FAM20C-205ENST00000515795 CECR2Q9BXF3 1484 aa33.05■■■□□ 2.88
FAM20C-205ENST00000515795 LOC105371045A0A1W2PR82 267 aa32.97■■■□□ 2.87
FAM20C-205ENST00000515795 MROH2BQ7Z745 1585 aa32.94■■■□□ 2.86
FAM20C-205ENST00000515795 TRIM41Q8WV44 630 aa32.77■■■□□ 2.84
FAM20C-205ENST00000515795 WIZO95785 1651 aa32.76■■■□□ 2.83
FAM20C-205ENST00000515795 PCGF6Q9BYE7 350 aa32.72■■■□□ 2.83
FAM20C-205ENST00000515795 BAZ1AQ9NRL2 1556 aaPredicted RBP32.63■■■□□ 2.81
FAM20C-205ENST00000515795 HRCP23327 699 aa32.6■■■□□ 2.81
FAM20C-205ENST00000515795 UNC13AQ9UPW8 1703 aa32.52■■■□□ 2.8
FAM20C-205ENST00000515795 FAM9AQ8IZU1 332 aaPredicted RBP32.41■■■□□ 2.78
FAM20C-205ENST00000515795 SMARCA4P51532 1647 aa32.37■■■□□ 2.77
FAM20C-205ENST00000515795 TOP2AP11388 1531 aaKnown RBP32.29■■■□□ 2.76
FAM20C-205ENST00000515795 EIF4G1Q04637 1599 aaKnown RBP32.24■■■□□ 2.75
FAM20C-205ENST00000515795 TRIM26Q12899 539 aaPredicted RBP32.24■■■□□ 2.75
FAM20C-205ENST00000515795 BICRAQ9NZM4 1560 aa32.11■■■□□ 2.73
FAM20C-205ENST00000515795 CCDC88BA6NC98 1476 aa32.11■■■□□ 2.73
FAM20C-205ENST00000515795 PABPN1Q86U42 306 aaKnown RBP eCLIP32.09■■■□□ 2.73
FAM20C-205ENST00000515795 SMARCA2P51531 1590 aa32.08■■■□□ 2.73
FAM20C-205ENST00000515795 EHMT2Q96KQ7 1210 aa32.08■■■□□ 2.73
FAM20C-205ENST00000515795 ABCC8Q09428 1581 aa31.91■■■□□ 2.7
FAM20C-205ENST00000515795 PPARGC1BQ86YN6 1023 aaKnown RBP31.87■■■□□ 2.69
FAM20C-205ENST00000515795 PEG3Q9GZU2 1588 aa31.8■■■□□ 2.68
FAM20C-205ENST00000515795 ATAD2BQ9ULI0 1458 aa31.58■■■□□ 2.65
FAM20C-205ENST00000515795 SOGA1O94964 1423 aa31.57■■■□□ 2.64
FAM20C-205ENST00000515795 BAZ1BQ9UIG0 1483 aaKnown RBP31.49■■■□□ 2.63
FAM20C-205ENST00000515795 EEA1Q15075 1411 aa31.48■■■□□ 2.63
FAM20C-205ENST00000515795 ZEB1P37275 1124 aaPredicted RBP31.47■■■□□ 2.63
FAM20C-205ENST00000515795 WRNQ14191 1432 aaPredicted RBP eCLIP31.45■■■□□ 2.63
FAM20C-205ENST00000515795 CSRNP3Q8WYN3 585 aa31.41■■■□□ 2.62
FAM20C-205ENST00000515795 RUSC2Q8N2Y8 1516 aa31.41■■■□□ 2.62
FAM20C-205ENST00000515795 CEP162Q5TB80 1403 aa31.35■■■□□ 2.61
FAM20C-205ENST00000515795 TNIKQ9UKE5 1360 aa31.35■■■□□ 2.61
FAM20C-205ENST00000515795 SYNJ1O43426 1573 aa31.3■■■□□ 2.6
FAM20C-205ENST00000515795 UBTFP17480 764 aaKnown RBP31.24■■■□□ 2.59
FAM20C-205ENST00000515795 GOLGA3Q08378 1498 aa31.21■■■□□ 2.59
FAM20C-205ENST00000515795 CEP164Q9UPV0 1460 aa31.07■■■□□ 2.56
FAM20C-205ENST00000515795 KIF21BO75037 1637 aa31.05■■■□□ 2.56
FAM20C-205ENST00000515795 NCAPD3P42695 1498 aa31.04■■■□□ 2.56
FAM20C-205ENST00000515795 HMGXB3Q12766 1538 aa31.03■■■□□ 2.56
FAM20C-205ENST00000515795 TTBK1Q5TCY1 1321 aaPredicted RBP31■■■□□ 2.55
FAM20C-205ENST00000515795 TOP2BQ02880 1626 aa30.98■■■□□ 2.55
FAM20C-205ENST00000515795 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.92■■■□□ 2.54
FAM20C-205ENST00000515795 BIVM-ERCC5R4GMW8 1640 aa30.88■■■□□ 2.53
FAM20C-205ENST00000515795 CCER1Q8TC90 406 aaPredicted RBP30.88■■■□□ 2.53
FAM20C-205ENST00000515795 CLIP1P30622 1438 aa30.83■■■□□ 2.53
FAM20C-205ENST00000515795 RAPGEF2Q9Y4G8 1499 aa30.83■■■□□ 2.53
FAM20C-205ENST00000515795 CFTRP13569 1480 aa30.71■■■□□ 2.51
FAM20C-205ENST00000515795 CUX1P39880 1505 aa30.69■■■□□ 2.5
FAM20C-205ENST00000515795 VPS8Q8N3P4 1428 aa30.67■■■□□ 2.5
FAM20C-205ENST00000515795 ERICH3Q5RHP9 1530 aa30.6■■■□□ 2.49
FAM20C-205ENST00000515795 RANGAP1P46060 587 aaPredicted RBP30.59■■■□□ 2.49
FAM20C-205ENST00000515795 PRXQ9BXM0 1461 aa30.59■■■□□ 2.49
FAM20C-205ENST00000515795 APLP2Q06481 763 aa30.54■■■□□ 2.48
FAM20C-205ENST00000515795 KIF27Q86VH2 1401 aa30.53■■■□□ 2.48
FAM20C-205ENST00000515795 PRDM2Q13029 1718 aa30.5■■■□□ 2.47
FAM20C-205ENST00000515795 CADPSQ9ULU8 1353 aa30.41■■■□□ 2.46
FAM20C-205ENST00000515795 HNRNPUL2Q1KMD3 747 aaKnown RBP30.37■■■□□ 2.45
FAM20C-205ENST00000515795 ARAP1Q96P48 1450 aa30.35■■■□□ 2.45
FAM20C-205ENST00000515795 CC2D2AQ9P2K1 1620 aa30.34■■■□□ 2.45
FAM20C-205ENST00000515795 CUX2O14529 1486 aa30.25■■■□□ 2.43
FAM20C-205ENST00000515795 FGD5Q6ZNL6 1462 aa30.19■■■□□ 2.42
FAM20C-205ENST00000515795 IGF1RP08069 1367 aa30.18■■■□□ 2.42
FAM20C-205ENST00000515795 ARHGAP35Q9NRY4 1499 aa30.13■■■□□ 2.41
FAM20C-205ENST00000515795 DIEXFQ68CQ4 756 aaKnown RBP30.13■■■□□ 2.41
FAM20C-205ENST00000515795 KANK4Q5T7N3 995 aaPredicted RBP30.11■■■□□ 2.41
FAM20C-205ENST00000515795 FANCD2Q9BXW9 1451 aa30.11■■■□□ 2.41
FAM20C-205ENST00000515795 CARMIL1Q5VZK9 1371 aa30.07■■■□□ 2.4
FAM20C-205ENST00000515795 ZNF316A6NFI3 1004 aaPredicted RBP30■■■□□ 2.39
FAM20C-205ENST00000515795 DNMBPQ6XZF7 1577 aa29.95■■■□□ 2.39
FAM20C-205ENST00000515795 RRBP1Q9P2E9 1410 aaKnown RBP29.93■■■□□ 2.38
FAM20C-205ENST00000515795 NESP48681 1621 aa29.91■■■□□ 2.38
FAM20C-205ENST00000515795 TOPBP1Q92547 1522 aa29.89■■■□□ 2.38
FAM20C-205ENST00000515795 RAD54L2Q9Y4B4 1467 aa29.88■■■□□ 2.37
FAM20C-205ENST00000515795 POLA1P09884 1462 aaPredicted RBP29.86■■■□□ 2.37
FAM20C-205ENST00000515795 ABCA10Q8WWZ4 1543 aa29.85■■■□□ 2.37
FAM20C-205ENST00000515795 SCAF1Q9H7N4 1312 aaKnown RBP29.83■■■□□ 2.37
FAM20C-205ENST00000515795 CCNB3Q8WWL7 1395 aa29.81■■■□□ 2.36
FAM20C-205ENST00000515795 CLSPNQ9HAW4 1339 aa29.79■■■□□ 2.36
FAM20C-205ENST00000515795 MAP3K1Q13233 1512 aa29.79■■■□□ 2.36
FAM20C-205ENST00000515795 DHX57Q6P158 1386 aaKnown RBP29.79■■■□□ 2.36
FAM20C-205ENST00000515795 TIAM1Q13009 1591 aa29.79■■■□□ 2.36
FAM20C-205ENST00000515795 LAMC3Q9Y6N6 1575 aa29.75■■■□□ 2.35
FAM20C-205ENST00000515795 FHAD1B1AJZ9 1412 aa29.72■■■□□ 2.35
FAM20C-205ENST00000515795 ACIN1Q9UKV3 1341 aaKnown RBP29.7■■■□□ 2.34
FAM20C-205ENST00000515795 CUL7Q14999 1698 aa29.69■■■□□ 2.34
FAM20C-205ENST00000515795 P3H3Q8IVL6 736 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms