RNA–Protein interactions for RNA: ENST00000515312.5

ZFYVE28-211, Transcript of zinc finger FYVE-type containing 28, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZFYVE28, Length 3,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28-211ENST00000515312 NISCHQ9Y2I1 1504 aa26.62■■□□□ 1.85
ZFYVE28-211ENST00000515312 PPARGC1BQ86YN6 1023 aaKnown RBP24.23■■□□□ 1.47
ZFYVE28-211ENST00000515312 HRCP23327 699 aa24.17■■□□□ 1.46
ZFYVE28-211ENST00000515312 PCGF6Q9BYE7 350 aa23.89■■□□□ 1.42
ZFYVE28-211ENST00000515312 PELP1Q8IZL8 1130 aaKnown RBP23.81■■□□□ 1.4
ZFYVE28-211ENST00000515312 SHROOM4Q9ULL8 1493 aa23.57■■□□□ 1.36
ZFYVE28-211ENST00000515312 SUPT5HO00267 1087 aaKnown RBP23.42■■□□□ 1.34
ZFYVE28-211ENST00000515312 SCAF1Q9H7N4 1312 aaKnown RBP23.4■■□□□ 1.34
ZFYVE28-211ENST00000515312 MYO15BQ96JP2 1530 aa22.9■■□□□ 1.26
ZFYVE28-211ENST00000515312 MYT1Q01538 1121 aa22.88■■□□□ 1.25
ZFYVE28-211ENST00000515312 DCAF8L2P0C7V8 631 aa22.85■■□□□ 1.25
ZFYVE28-211ENST00000515312 LOC105371045A0A1W2PR82 267 aa22.7■■□□□ 1.23
ZFYVE28-211ENST00000515312 CHIC1Q5VXU3 224 aa22.7■■□□□ 1.23
ZFYVE28-211ENST00000515312 NEUROD1Q13562 356 aa22.62■■□□□ 1.21
ZFYVE28-211ENST00000515312 GTF3C3Q9Y5Q9 886 aa22.61■■□□□ 1.21
ZFYVE28-211ENST00000515312 ACIN1Q9UKV3 1341 aaKnown RBP22.5■■□□□ 1.19
ZFYVE28-211ENST00000515312 ZCCHC6Q5VYS8 1495 aaKnown RBP22.5■■□□□ 1.19
ZFYVE28-211ENST00000515312 TRIM26Q12899 539 aaPredicted RBP22.49■■□□□ 1.19
ZFYVE28-211ENST00000515312 ZEB1P37275 1124 aaPredicted RBP22.26■■□□□ 1.15
ZFYVE28-211ENST00000515312 EHMT2Q96KQ7 1210 aa22.21■■□□□ 1.15
ZFYVE28-211ENST00000515312 YTHDC1Q96MU7 727 aaKnown RBP22.18■■□□□ 1.14
ZFYVE28-211ENST00000515312 CCDC180Q9P1Z9 1646 aa22.15■■□□□ 1.14
ZFYVE28-211ENST00000515312 CENPBP07199 599 aaPredicted RBP22.14■■□□□ 1.13
ZFYVE28-211ENST00000515312 DCAF1Q9Y4B6 1507 aa22.05■■□□□ 1.12
ZFYVE28-211ENST00000515312 BCL11AQ9H165 835 aa21.99■■□□□ 1.11
ZFYVE28-211ENST00000515312 DIEXFQ68CQ4 756 aaKnown RBP21.96■■□□□ 1.11
ZFYVE28-211ENST00000515312 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.96■■□□□ 1.11
ZFYVE28-211ENST00000515312 FAM9AQ8IZU1 332 aaPredicted RBP21.88■■□□□ 1.09
ZFYVE28-211ENST00000515312 CCER1Q8TC90 406 aaPredicted RBP21.83■■□□□ 1.08
ZFYVE28-211ENST00000515312 TTBK1Q5TCY1 1321 aaPredicted RBP21.7■■□□□ 1.06
ZFYVE28-211ENST00000515312 TRIM41Q8WV44 630 aa21.53■■□□□ 1.04
ZFYVE28-211ENST00000515312 CSRNP3Q8WYN3 585 aa21.52■■□□□ 1.04
ZFYVE28-211ENST00000515312 ANP32EQ9BTT0 268 aa21.49■■□□□ 1.03
ZFYVE28-211ENST00000515312 PRKCSHP14314 528 aaPredicted RBP21.46■■□□□ 1.03
ZFYVE28-211ENST00000515312 MIER1Q8N108 512 aa21.42■■□□□ 1.02
ZFYVE28-211ENST00000515312 RSF1Q96T23 1441 aaPredicted RBP21.32■■□□□ 1
ZFYVE28-211ENST00000515312 SCRIBQ14160 1630 aa21.29■■□□□ 1
ZFYVE28-211ENST00000515312 TSHZ2Q9NRE2 1034 aa21.25■□□□□ 0.99
ZFYVE28-211ENST00000515312 ZNF316A6NFI3 1004 aaPredicted RBP21.24■□□□□ 0.99
ZFYVE28-211ENST00000515312 ABCC9O60706 1549 aa21.24■□□□□ 0.99
ZFYVE28-211ENST00000515312 BCANQ96GW7 911 aa21.21■□□□□ 0.99
ZFYVE28-211ENST00000515312 SUPT16HQ9Y5B9 1047 aaKnown RBP21.19■□□□□ 0.98
ZFYVE28-211ENST00000515312 RB1CC1Q8TDY2 1594 aa21.09■□□□□ 0.97
ZFYVE28-211ENST00000515312 CECR2Q9BXF3 1484 aa20.96■□□□□ 0.95
ZFYVE28-211ENST00000515312 MROH2BQ7Z745 1585 aa20.83■□□□□ 0.92
ZFYVE28-211ENST00000515312 ITGAEP38570 1179 aa20.81■□□□□ 0.92
ZFYVE28-211ENST00000515312 HNRNPUL2Q1KMD3 747 aaKnown RBP20.8■□□□□ 0.92
ZFYVE28-211ENST00000515312 ANO8Q9HCE9 1232 aaPredicted RBP20.79■□□□□ 0.92
ZFYVE28-211ENST00000515312 RBM19Q9Y4C8 960 aaKnown RBP20.74■□□□□ 0.91
ZFYVE28-211ENST00000515312 FKBP8Q14318 412 aa20.73■□□□□ 0.91
ZFYVE28-211ENST00000515312 WIZO95785 1651 aa20.7■□□□□ 0.9
ZFYVE28-211ENST00000515312 KCNH8Q96L42 1107 aa20.66■□□□□ 0.9
ZFYVE28-211ENST00000515312 ERICH6Q7L0X2 663 aa20.66■□□□□ 0.9
ZFYVE28-211ENST00000515312 MSH5O43196 834 aa20.63■□□□□ 0.89
ZFYVE28-211ENST00000515312 CCDC136Q96JN2 1154 aa20.62■□□□□ 0.89
ZFYVE28-211ENST00000515312 NACADO15069 1562 aa20.6■□□□□ 0.89
ZFYVE28-211ENST00000515312 UBTFP17480 764 aaKnown RBP20.57■□□□□ 0.88
ZFYVE28-211ENST00000515312 PABPN1Q86U42 306 aaKnown RBP eCLIP20.53■□□□□ 0.88
ZFYVE28-211ENST00000515312 ABCC8Q09428 1581 aa20.48■□□□□ 0.87
ZFYVE28-211ENST00000515312 SALL2Q9Y467 1007 aaPredicted RBP20.48■□□□□ 0.87
ZFYVE28-211ENST00000515312 CCDC88BA6NC98 1476 aa20.47■□□□□ 0.87
ZFYVE28-211ENST00000515312 DEKP35659 375 aaKnown RBP20.46■□□□□ 0.87
ZFYVE28-211ENST00000515312 CLSPNQ9HAW4 1339 aa20.45■□□□□ 0.86
ZFYVE28-211ENST00000515312 RTN4Q9NQC3 1192 aaKnown RBP20.43■□□□□ 0.86
ZFYVE28-211ENST00000515312 SOGA1O94964 1423 aa20.42■□□□□ 0.86
ZFYVE28-211ENST00000515312 NBR1Q14596 966 aa20.41■□□□□ 0.86
ZFYVE28-211ENST00000515312 CEP162Q5TB80 1403 aa20.41■□□□□ 0.86
ZFYVE28-211ENST00000515312 NEFLP07196 543 aa20.4■□□□□ 0.86
ZFYVE28-211ENST00000515312 BAZ1AQ9NRL2 1556 aaPredicted RBP20.4■□□□□ 0.86
ZFYVE28-211ENST00000515312 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.39■□□□□ 0.85
ZFYVE28-211ENST00000515312 RANGAP1P46060 587 aaPredicted RBP20.36■□□□□ 0.85
ZFYVE28-211ENST00000515312 IRX6P78412 446 aaPredicted RBP20.36■□□□□ 0.85
ZFYVE28-211ENST00000515312 TRIM52Q96A61 297 aa20.36■□□□□ 0.85
ZFYVE28-211ENST00000515312 RUSC2Q8N2Y8 1516 aa20.3■□□□□ 0.84
ZFYVE28-211ENST00000515312 TNIKQ9UKE5 1360 aa20.27■□□□□ 0.84
ZFYVE28-211ENST00000515312 APLP2Q06481 763 aa20.26■□□□□ 0.83
ZFYVE28-211ENST00000515312 EIF4G1Q04637 1599 aaKnown RBP20.25■□□□□ 0.83
ZFYVE28-211ENST00000515312 WRNQ14191 1432 aaPredicted RBP eCLIP20.24■□□□□ 0.83
ZFYVE28-211ENST00000515312 TOP2AP11388 1531 aaKnown RBP20.24■□□□□ 0.83
ZFYVE28-211ENST00000515312 SMARCA2P51531 1590 aa20.18■□□□□ 0.82
ZFYVE28-211ENST00000515312 IL27Q8NEV9 243 aa20.17■□□□□ 0.82
ZFYVE28-211ENST00000515312 SMARCA4P51532 1647 aa20.15■□□□□ 0.82
ZFYVE28-211ENST00000515312 DDX10Q13206 875 aaKnown RBP20.14■□□□□ 0.82
ZFYVE28-211ENST00000515312 CDK11AQ9UQ88 783 aaPredicted RBP20.13■□□□□ 0.81
ZFYVE28-211ENST00000515312 HIRIP3Q9BW71 556 aaPredicted RBP20.12■□□□□ 0.81
ZFYVE28-211ENST00000515312 GOLGA3Q08378 1498 aa20.09■□□□□ 0.81
ZFYVE28-211ENST00000515312 EEA1Q15075 1411 aa20.08■□□□□ 0.8
ZFYVE28-211ENST00000515312 EIF5BO60841 1220 aaKnown RBP20.07■□□□□ 0.8
ZFYVE28-211ENST00000515312 FANCIQ9NVI1 1328 aa20.01■□□□□ 0.79
ZFYVE28-211ENST00000515312 PAK3O75914 559 aaPredicted RBP20■□□□□ 0.79
ZFYVE28-211ENST00000515312 CLIP1P30622 1438 aa19.99■□□□□ 0.79
ZFYVE28-211ENST00000515312 CEP164Q9UPV0 1460 aa19.92■□□□□ 0.78
ZFYVE28-211ENST00000515312 RTL5Q5HYW3 569 aaPredicted RBP19.89■□□□□ 0.78
ZFYVE28-211ENST00000515312 NOP58Q9Y2X3 529 aaKnown RBP19.87■□□□□ 0.77
ZFYVE28-211ENST00000515312 B4GALNT3Q6L9W6 998 aa19.87■□□□□ 0.77
ZFYVE28-211ENST00000515312 MYT1LQ9UL68 1186 aa19.86■□□□□ 0.77
ZFYVE28-211ENST00000515312 UBE2Q2Q8WVN8 375 aa19.84■□□□□ 0.77
ZFYVE28-211ENST00000515312 RAPGEF2Q9Y4G8 1499 aa19.84■□□□□ 0.77
ZFYVE28-211ENST00000515312 VPS8Q8N3P4 1428 aa19.84■□□□□ 0.77
ZFYVE28-211ENST00000515312 SYNJ1O43426 1573 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms