RNA–Protein interactions for RNA: ENST00000514842.5

RPL9-211, Transcript of ribosomal protein L9, humanhuman

TSL 5

Gene RPL9, Length 2,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL9-211ENST00000514842 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.32□□□□□ -0.61e-323■■■□□ 15.1
RPL9-211ENST00000514842 YBX3P16989 372 aaKnown RBP eCLIP12.09□□□□□ -0.478e-30■□□□□ 8.9
RPL9-211ENST00000514842 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.36□□□□□ -0.434e-17■■■■■ 149.1
RPL9-211ENST00000514842 U2AF2P26368 475 aaKnown RBP eCLIP14.37□□□□□ -0.117e-17■■■□□ 17.9
RPL9-211ENST00000514842 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.86□□□□□ -0.678e-14■■□□□ 11.9
RPL9-211ENST00000514842 DDX3XO00571 662 aaKnown RBP eCLIP12.74□□□□□ -0.373e-12■■■□□ 15.1
RPL9-211ENST00000514842 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.94□□□□□ -0.52e-11■□□□□ 8.5
RPL9-211ENST00000514842 AQRO60306 1485 aaKnown RBP eCLIP16.4■□□□□ 0.223e-11■■■■■ 62
RPL9-211ENST00000514842 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11□□□□□ -0.654e-11■■■■■ 37.5
RPL9-211ENST00000514842 WRNQ14191 1432 aaPredicted RBP eCLIP17.78■□□□□ 0.445e-11■■□□□ 11.8
RPL9-211ENST00000514842 SF3B4Q15427 424 aaKnown RBP eCLIP11.99□□□□□ -0.497e-11■■■■■ 29.8
RPL9-211ENST00000514842 LARP4Q71RC2 724 aaKnown RBP eCLIP11.83□□□□□ -0.522e-10■■■■■ 31.2
RPL9-211ENST00000514842 METAP2P50579 478 aaKnown RBP eCLIP13.28□□□□□ -0.286e-10■□□□□ 9.5
RPL9-211ENST00000514842 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.48■□□□□ 0.076e-10■□□□□ 10.7
RPL9-211ENST00000514842 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.45□□□□□ -0.421e-9■■□□□ 13.7
RPL9-211ENST00000514842 SUB1P53999 127 aaKnown RBP eCLIP9.34□□□□□ -0.911e-9■■■■■ 60.3
RPL9-211ENST00000514842 PABPC4Q13310 644 aaKnown RBP eCLIP12.5□□□□□ -0.412e-9■■■■□ 20.2
RPL9-211ENST00000514842 EIF3GO75821 320 aaKnown RBP eCLIP10.98□□□□□ -0.652e-9■■■■■ 38.6
RPL9-211ENST00000514842 NCBP2P52298 156 aaKnown RBP eCLIP10.84□□□□□ -0.676e-9■■□□□ 13
RPL9-211ENST00000514842 DDX6P26196 483 aaKnown RBP eCLIP10.83□□□□□ -0.686e-8■■□□□ 11.8
RPL9-211ENST00000514842 CDC40O60508 579 aaKnown RBP eCLIP10.69□□□□□ -0.76e-8■■■□□ 16.4
RPL9-211ENST00000514842 EFTUD2Q15029 972 aaKnown RBP eCLIP12.43□□□□□ -0.421e-7■■■■□ 26.2
RPL9-211ENST00000514842 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.38□□□□□ -1.071e-7■■■■■ 33.2
RPL9-211ENST00000514842 KHSRPQ92945 711 aaKnown RBP eCLIP11.88□□□□□ -0.512e-7■■■□□ 16.5
RPL9-211ENST00000514842 RPS3P23396 243 aaKnown RBP eCLIP11.41□□□□□ -0.582e-7■■■■■ 54.7
RPL9-211ENST00000514842 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.88□□□□□ -0.353e-7■□□□□ 11.3
RPL9-211ENST00000514842 RBM22Q9NW64 420 aaKnown RBP eCLIP11.52□□□□□ -0.564e-7■■■■■ 29.4
RPL9-211ENST00000514842 SF3A3Q12874 501 aaKnown RBP eCLIP12.91□□□□□ -0.344e-7■■■□□ 16.9
RPL9-211ENST00000514842 HNRNPCP07910 306 aaKnown RBP eCLIP12.38□□□□□ -0.436e-7■■■□□ 18.1
RPL9-211ENST00000514842 XRCC6P12956 609 aaKnown RBP eCLIP15.29■□□□□ 0.049e-7■□□□□ 9.3
RPL9-211ENST00000514842 NOLC1Q14978 699 aaKnown RBP eCLIP14.45□□□□□ -0.11e-6■■□□□ 14.4
RPL9-211ENST00000514842 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.78□□□□□ -0.361e-6■■□□□ 12.9
RPL9-211ENST00000514842 SF3B1O75533 1304 aaKnown RBP eCLIP12.35□□□□□ -0.432e-6■■■■■ 137.5
RPL9-211ENST00000514842 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.13□□□□□ -0.633e-6■■■■□ 23.5
Retrieved 34 of 34 RNA–protein pairs in 24 ms