RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 TRIM26Q12899 539 aaPredicted RBP20.16■□□□□ 0.82
PVT1-203ENST00000513868 SNAPC4Q5SXM2 1469 aa20.14■□□□□ 0.81
PVT1-203ENST00000513868 PPARGC1BQ86YN6 1023 aaKnown RBP20.13■□□□□ 0.81
PVT1-203ENST00000513868 MAGI1Q96QZ7 1491 aaPredicted RBP20.09■□□□□ 0.81
PVT1-203ENST00000513868 EFCAB5A4FU69 1503 aa20.09■□□□□ 0.81
PVT1-203ENST00000513868 SAMD9Q5K651 1589 aa20.05■□□□□ 0.8
PVT1-203ENST00000513868 GRIN2AQ12879 1464 aa20.04■□□□□ 0.8
PVT1-203ENST00000513868 IQGAP2Q13576 1575 aa20.02■□□□□ 0.8
PVT1-203ENST00000513868 SYNJ2O15056 1496 aa20.02■□□□□ 0.79
PVT1-203ENST00000513868 FHOD3Q2V2M9 1422 aa19.98■□□□□ 0.79
PVT1-203ENST00000513868 CEP170Q5SW79 1584 aa19.96■□□□□ 0.79
PVT1-203ENST00000513868 P3H3Q8IVL6 736 aa19.96■□□□□ 0.79
PVT1-203ENST00000513868 KIAA0586Q9BVV6 1533 aa19.95■□□□□ 0.78
PVT1-203ENST00000513868 PCF11O94913 1555 aaKnown RBP19.94■□□□□ 0.78
PVT1-203ENST00000513868 TTBK1Q5TCY1 1321 aaPredicted RBP19.93■□□□□ 0.78
PVT1-203ENST00000513868 UGGT2Q9NYU1 1516 aa19.93■□□□□ 0.78
PVT1-203ENST00000513868 APLP2Q06481 763 aa19.92■□□□□ 0.78
PVT1-203ENST00000513868 CHMP7Q8WUX9 453 aaPredicted RBP19.91■□□□□ 0.78
PVT1-203ENST00000513868 MAP3K1Q13233 1512 aa19.89■□□□□ 0.78
PVT1-203ENST00000513868 NUP160Q12769 1436 aa19.89■□□□□ 0.78
PVT1-203ENST00000513868 CHD1O14646 1710 aa19.89■□□□□ 0.77
PVT1-203ENST00000513868 TIAM1Q13009 1591 aa19.88■□□□□ 0.77
PVT1-203ENST00000513868 CFAP43Q8NDM7 1665 aa19.87■□□□□ 0.77
PVT1-203ENST00000513868 FMN1Q68DA7 1419 aa19.87■□□□□ 0.77
PVT1-203ENST00000513868 CASKIN1Q8WXD9 1431 aa19.87■□□□□ 0.77
PVT1-203ENST00000513868 FYCO1Q9BQS8 1478 aa19.86■□□□□ 0.77
PVT1-203ENST00000513868 LRRIQ1Q96JM4 1722 aa19.86■□□□□ 0.77
PVT1-203ENST00000513868 KANK4Q5T7N3 995 aaPredicted RBP19.86■□□□□ 0.77
PVT1-203ENST00000513868 FBLN2P98095 1184 aa19.84■□□□□ 0.77
PVT1-203ENST00000513868 DISP1Q96F81 1524 aa19.84■□□□□ 0.77
PVT1-203ENST00000513868 KIAA0556O60303 1618 aa19.83■□□□□ 0.76
PVT1-203ENST00000513868 LRRC9Q6ZRR7 1453 aa19.76■□□□□ 0.75
PVT1-203ENST00000513868 JPH4Q96JJ6 628 aa19.71■□□□□ 0.75
PVT1-203ENST00000513868 ATP1B4Q9UN42 357 aaPredicted RBP19.71■□□□□ 0.75
PVT1-203ENST00000513868 HECW1Q76N89 1606 aa19.7■□□□□ 0.74
PVT1-203ENST00000513868 SHROOM2Q13796 1616 aa19.67■□□□□ 0.74
PVT1-203ENST00000513868 CARMIL2Q6F5E8 1435 aa19.65■□□□□ 0.74
PVT1-203ENST00000513868 RRBP1Q9P2E9 1410 aaKnown RBP19.65■□□□□ 0.74
PVT1-203ENST00000513868 RAPGEF6Q8TEU7 1601 aa19.64■□□□□ 0.74
PVT1-203ENST00000513868 HRCP23327 699 aa19.64■□□□□ 0.73
PVT1-203ENST00000513868 CCDC18Q5T9S5 1454 aa19.63■□□□□ 0.73
PVT1-203ENST00000513868 EPRSP07814 1512 aaKnown RBP19.63■□□□□ 0.73
PVT1-203ENST00000513868 CLASP1Q7Z460 1538 aa19.61■□□□□ 0.73
PVT1-203ENST00000513868 MAGI3Q5TCQ9 1506 aa19.6■□□□□ 0.73
PVT1-203ENST00000513868 NUP153P49790 1475 aaKnown RBP19.59■□□□□ 0.73
PVT1-203ENST00000513868 PRG4Q92954 1404 aaPredicted RBP19.59■□□□□ 0.73
PVT1-203ENST00000513868 CDK13Q14004 1512 aaKnown RBP19.58■□□□□ 0.73
PVT1-203ENST00000513868 PHLDB1Q86UU1 1377 aa19.58■□□□□ 0.72
PVT1-203ENST00000513868 EHBP1L1Q8N3D4 1523 aa19.57■□□□□ 0.72
PVT1-203ENST00000513868 SUPT6HQ7KZ85 1726 aaKnown RBP19.56■□□□□ 0.72
PVT1-203ENST00000513868 PLB1Q6P1J6 1458 aa19.56■□□□□ 0.72
PVT1-203ENST00000513868 MTUS2Q5JR59 1369 aa19.55■□□□□ 0.72
PVT1-203ENST00000513868 ABCA8O94911 1581 aa19.55■□□□□ 0.72
PVT1-203ENST00000513868 CCNB3Q8WWL7 1395 aa19.54■□□□□ 0.72
PVT1-203ENST00000513868 ERCC6L2Q5T890 1561 aa19.53■□□□□ 0.72
PVT1-203ENST00000513868 ARHGEF11O15085 1522 aa19.51■□□□□ 0.71
PVT1-203ENST00000513868 HNRNPUL2Q1KMD3 747 aaKnown RBP19.51■□□□□ 0.71
PVT1-203ENST00000513868 NCOA2Q15596 1464 aa19.5■□□□□ 0.71
PVT1-203ENST00000513868 ARID3CA6NKF2 412 aa19.46■□□□□ 0.71
PVT1-203ENST00000513868 PTPRGP23470 1445 aa19.46■□□□□ 0.71
PVT1-203ENST00000513868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.43■□□□□ 0.7
PVT1-203ENST00000513868 FGD6Q6ZV73 1430 aa19.43■□□□□ 0.7
PVT1-203ENST00000513868 MYOM3Q5VTT5 1437 aa19.42■□□□□ 0.7
PVT1-203ENST00000513868 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.41■□□□□ 0.7
PVT1-203ENST00000513868 ATP10BO94823 1461 aa19.4■□□□□ 0.7
PVT1-203ENST00000513868 ADCY10Q96PN6 1610 aa19.39■□□□□ 0.69
PVT1-203ENST00000513868 UACAQ9BZF9 1416 aa19.37■□□□□ 0.69
PVT1-203ENST00000513868 TROQ12816 1431 aaPredicted RBP19.36■□□□□ 0.69
PVT1-203ENST00000513868 PTPN23Q9H3S7 1636 aa19.36■□□□□ 0.69
PVT1-203ENST00000513868 CDK11AQ9UQ88 783 aaPredicted RBP19.35■□□□□ 0.69
PVT1-203ENST00000513868 FAM50AQ14320 339 aaKnown RBP19.34■□□□□ 0.69
PVT1-203ENST00000513868 KIF14Q15058 1648 aa19.34■□□□□ 0.69
PVT1-203ENST00000513868 ABCC2Q92887 1545 aa19.33■□□□□ 0.68
PVT1-203ENST00000513868 ZEB1P37275 1124 aaPredicted RBP19.33■□□□□ 0.68
PVT1-203ENST00000513868 CCER1Q8TC90 406 aaPredicted RBP19.33■□□□□ 0.68
PVT1-203ENST00000513868 ITGAEP38570 1179 aa19.32■□□□□ 0.68
PVT1-203ENST00000513868 TCOF1Q13428 1488 aaKnown RBP19.32■□□□□ 0.68
PVT1-203ENST00000513868 OSCARQ8IYS5 282 aa19.3■□□□□ 0.68
PVT1-203ENST00000513868 MIA2Q96PC5 1412 aa19.3■□□□□ 0.68
PVT1-203ENST00000513868 ITSN2Q9NZM3 1697 aa19.28■□□□□ 0.68
PVT1-203ENST00000513868 UHRF1BP1LA0JNW5 1464 aa19.27■□□□□ 0.68
PVT1-203ENST00000513868 CDC42BPAQ5VT25 1732 aa19.26■□□□□ 0.67
PVT1-203ENST00000513868 PTPRKQ15262 1439 aa19.25■□□□□ 0.67
PVT1-203ENST00000513868 PLEKHD1A6NEE1 506 aa19.25■□□□□ 0.67
PVT1-203ENST00000513868 ZCCHC11Q5TAX3 1644 aaKnown RBP19.24■□□□□ 0.67
PVT1-203ENST00000513868 ABCC10Q5T3U5 1492 aa19.24■□□□□ 0.67
PVT1-203ENST00000513868 GPATCH8Q9UKJ3 1502 aaKnown RBP19.23■□□□□ 0.67
PVT1-203ENST00000513868 KDM5BQ9UGL1 1544 aa19.21■□□□□ 0.67
PVT1-203ENST00000513868 SETD5Q9C0A6 1442 aa19.21■□□□□ 0.67
PVT1-203ENST00000513868 RAB3GAP2Q9H2M9 1393 aa19.2■□□□□ 0.66
PVT1-203ENST00000513868 DNMT1P26358 1616 aaKnown RBP19.17■□□□□ 0.66
PVT1-203ENST00000513868 DHX57Q6P158 1386 aaKnown RBP19.17■□□□□ 0.66
PVT1-203ENST00000513868 CDC42BPBQ9Y5S2 1711 aa19.16■□□□□ 0.66
PVT1-203ENST00000513868 ZNF644Q9H582 1327 aaPredicted RBP19.15■□□□□ 0.66
PVT1-203ENST00000513868 CAMSAP2Q08AD1 1489 aa19.14■□□□□ 0.65
PVT1-203ENST00000513868 HFM1A2PYH4 1435 aa19.13■□□□□ 0.65
PVT1-203ENST00000513868 PREX2Q70Z35 1606 aa19.13■□□□□ 0.65
PVT1-203ENST00000513868 GCC2Q8IWJ2 1684 aa19.13■□□□□ 0.65
PVT1-203ENST00000513868 TTC37Q6PGP7 1564 aa19.12■□□□□ 0.65
PVT1-203ENST00000513868 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms