RNA–Protein interactions for RNA: ENST00000513856.1

AFAP1-208, Transcript of actin filament associated protein 1, humanhuman

TSL 4

Gene AFAP1, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1-208ENST00000513856 NISCHQ9Y2I1 1504 aa24.1■■□□□ 1.45
AFAP1-208ENST00000513856 CCDC180Q9P1Z9 1646 aa21.49■■□□□ 1.03
AFAP1-208ENST00000513856 ABCC9O60706 1549 aa21.09■□□□□ 0.97
AFAP1-208ENST00000513856 RB1CC1Q8TDY2 1594 aa20.24■□□□□ 0.83
AFAP1-208ENST00000513856 NACADO15069 1562 aa20.22■□□□□ 0.83
AFAP1-208ENST00000513856 MYO15BQ96JP2 1530 aa20.15■□□□□ 0.82
AFAP1-208ENST00000513856 ZCCHC6Q5VYS8 1495 aaKnown RBP20.05■□□□□ 0.8
AFAP1-208ENST00000513856 DCAF1Q9Y4B6 1507 aa19.99■□□□□ 0.79
AFAP1-208ENST00000513856 DCAF8L2P0C7V8 631 aa19.89■□□□□ 0.77
AFAP1-208ENST00000513856 UNC13AQ9UPW8 1703 aa19.85■□□□□ 0.77
AFAP1-208ENST00000513856 BICRAQ9NZM4 1560 aa19.77■□□□□ 0.76
AFAP1-208ENST00000513856 PABPN1Q86U42 306 aaKnown RBP eCLIP19.65■□□□□ 0.74
AFAP1-208ENST00000513856 DNAJC5BQ9UF47 199 aa19.62■□□□□ 0.73
AFAP1-208ENST00000513856 SHROOM4Q9ULL8 1493 aa19.5■□□□□ 0.71
AFAP1-208ENST00000513856 SCRIBQ14160 1630 aa19.5■□□□□ 0.71
AFAP1-208ENST00000513856 EIF4G1Q04637 1599 aaKnown RBP19.18■□□□□ 0.66
AFAP1-208ENST00000513856 CC2D2AQ9P2K1 1620 aa19.12■□□□□ 0.65
AFAP1-208ENST00000513856 CECR2Q9BXF3 1484 aa18.98■□□□□ 0.63
AFAP1-208ENST00000513856 NCAPD3P42695 1498 aa18.71■□□□□ 0.59
AFAP1-208ENST00000513856 SMARCA4P51532 1647 aa18.71■□□□□ 0.58
AFAP1-208ENST00000513856 ATAD2BQ9ULI0 1458 aa18.67■□□□□ 0.58
AFAP1-208ENST00000513856 BAZ1AQ9NRL2 1556 aaPredicted RBP18.64■□□□□ 0.57
AFAP1-208ENST00000513856 PEG3Q9GZU2 1588 aa18.62■□□□□ 0.57
AFAP1-208ENST00000513856 SMARCA2P51531 1590 aa18.58■□□□□ 0.56
AFAP1-208ENST00000513856 HMGXB3Q12766 1538 aa18.58■□□□□ 0.56
AFAP1-208ENST00000513856 MROH2BQ7Z745 1585 aa18.56■□□□□ 0.56
AFAP1-208ENST00000513856 BAZ1BQ9UIG0 1483 aaKnown RBP18.41■□□□□ 0.54
AFAP1-208ENST00000513856 WIZO95785 1651 aa18.31■□□□□ 0.52
AFAP1-208ENST00000513856 RSF1Q96T23 1441 aaPredicted RBP18.3■□□□□ 0.52
AFAP1-208ENST00000513856 NESP48681 1621 aa18.25■□□□□ 0.51
AFAP1-208ENST00000513856 LAMC3Q9Y6N6 1575 aa18.17■□□□□ 0.5
AFAP1-208ENST00000513856 TOP2AP11388 1531 aaKnown RBP18.13■□□□□ 0.49
AFAP1-208ENST00000513856 CUX2O14529 1486 aa18.1■□□□□ 0.49
AFAP1-208ENST00000513856 ERCC6Q03468 1493 aa18.1■□□□□ 0.49
AFAP1-208ENST00000513856 CADPSQ9ULU8 1353 aa18.09■□□□□ 0.49
AFAP1-208ENST00000513856 THOC2Q8NI27 1593 aaKnown RBP18.06■□□□□ 0.48
AFAP1-208ENST00000513856 KIF21AQ7Z4S6 1674 aa18.02■□□□□ 0.47
AFAP1-208ENST00000513856 PDS5BQ9NTI5 1447 aa18■□□□□ 0.47
AFAP1-208ENST00000513856 CFTRP13569 1480 aa18■□□□□ 0.47
AFAP1-208ENST00000513856 CCDC88BA6NC98 1476 aa17.92■□□□□ 0.46
AFAP1-208ENST00000513856 WDR62O43379 1518 aa17.88■□□□□ 0.45
AFAP1-208ENST00000513856 MRC2Q9UBG0 1479 aa17.87■□□□□ 0.45
AFAP1-208ENST00000513856 FANCD2Q9BXW9 1451 aa17.86■□□□□ 0.45
AFAP1-208ENST00000513856 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
AFAP1-208ENST00000513856 PRDM2Q13029 1718 aa17.8■□□□□ 0.44
AFAP1-208ENST00000513856 URB2Q14146 1524 aaKnown RBP17.75■□□□□ 0.43
AFAP1-208ENST00000513856 DNAJC5Q9H3Z4 198 aa17.74■□□□□ 0.43
AFAP1-208ENST00000513856 TOPBP1Q92547 1522 aa17.58■□□□□ 0.41
AFAP1-208ENST00000513856 DNMBPQ6XZF7 1577 aa17.54■□□□□ 0.4
AFAP1-208ENST00000513856 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
AFAP1-208ENST00000513856 IFT140Q96RY7 1462 aa17.49■□□□□ 0.39
AFAP1-208ENST00000513856 SUPT5HO00267 1087 aaKnown RBP17.48■□□□□ 0.39
AFAP1-208ENST00000513856 TARBP1Q13395 1621 aaKnown RBP17.47■□□□□ 0.39
AFAP1-208ENST00000513856 ZNF608Q9ULD9 1512 aaPredicted RBP17.47■□□□□ 0.39
AFAP1-208ENST00000513856 POLA1P09884 1462 aaPredicted RBP17.44■□□□□ 0.38
AFAP1-208ENST00000513856 CUX1P39880 1505 aa17.42■□□□□ 0.38
AFAP1-208ENST00000513856 EIF4G3O43432 1585 aaKnown RBP17.36■□□□□ 0.37
AFAP1-208ENST00000513856 FGD5Q6ZNL6 1462 aa17.34■□□□□ 0.37
AFAP1-208ENST00000513856 RAD54L2Q9Y4B4 1467 aa17.33■□□□□ 0.37
AFAP1-208ENST00000513856 AQRO60306 1485 aaKnown RBP eCLIP17.31■□□□□ 0.36
AFAP1-208ENST00000513856 SOGA1O94964 1423 aa17.3■□□□□ 0.36
AFAP1-208ENST00000513856 WDR97A6NE52 1622 aa17.29■□□□□ 0.36
AFAP1-208ENST00000513856 BIVM-ERCC5R4GMW8 1640 aa17.23■□□□□ 0.35
AFAP1-208ENST00000513856 OSCARQ8IYS5 282 aa17.23■□□□□ 0.35
AFAP1-208ENST00000513856 TDRD9Q8NDG6 1382 aaKnown RBP17.22■□□□□ 0.35
AFAP1-208ENST00000513856 TOP2BQ02880 1626 aa17.21■□□□□ 0.35
AFAP1-208ENST00000513856 ABCA10Q8WWZ4 1543 aa17.21■□□□□ 0.34
AFAP1-208ENST00000513856 SYNJ1O43426 1573 aa17.2■□□□□ 0.34
AFAP1-208ENST00000513856 WRNQ14191 1432 aaPredicted RBP eCLIP17.17■□□□□ 0.34
AFAP1-208ENST00000513856 ABCA5Q8WWZ7 1642 aa17.17■□□□□ 0.34
AFAP1-208ENST00000513856 CHD1O14646 1710 aa17.15■□□□□ 0.34
AFAP1-208ENST00000513856 GRIN2BQ13224 1484 aa17.13■□□□□ 0.33
AFAP1-208ENST00000513856 SNAPC4Q5SXM2 1469 aa17.12■□□□□ 0.33
AFAP1-208ENST00000513856 MAGI1Q96QZ7 1491 aaPredicted RBP17.12■□□□□ 0.33
AFAP1-208ENST00000513856 GAPVD1Q14C86 1478 aa17.11■□□□□ 0.33
AFAP1-208ENST00000513856 PBRM1Q86U86 1689 aa17.08■□□□□ 0.32
AFAP1-208ENST00000513856 SYNJ2O15056 1496 aa17.05■□□□□ 0.32
AFAP1-208ENST00000513856 RIMBP3CA6NJZ7 1639 aa17.05■□□□□ 0.32
AFAP1-208ENST00000513856 RIMBP3BA6NNM3 1639 aa17.05■□□□□ 0.32
AFAP1-208ENST00000513856 RIMBP3Q9UFD9 1639 aa17.05■□□□□ 0.32
AFAP1-208ENST00000513856 CLASP1Q7Z460 1538 aa17.05■□□□□ 0.32
AFAP1-208ENST00000513856 ARHGEF11O15085 1522 aa17.03■□□□□ 0.32
AFAP1-208ENST00000513856 ERICH3Q5RHP9 1530 aa16.98■□□□□ 0.31
AFAP1-208ENST00000513856 ADAMTS12P58397 1594 aa16.98■□□□□ 0.31
AFAP1-208ENST00000513856 FBLN2P98095 1184 aa16.95■□□□□ 0.3
AFAP1-208ENST00000513856 CHMP7Q8WUX9 453 aaPredicted RBP16.94■□□□□ 0.3
AFAP1-208ENST00000513856 GRIN2AQ12879 1464 aa16.93■□□□□ 0.3
AFAP1-208ENST00000513856 NUP160Q12769 1436 aa16.92■□□□□ 0.3
AFAP1-208ENST00000513856 ARAP1Q96P48 1450 aa16.92■□□□□ 0.3
AFAP1-208ENST00000513856 FHAD1B1AJZ9 1412 aa16.91■□□□□ 0.3
AFAP1-208ENST00000513856 TRIM41Q8WV44 630 aa16.89■□□□□ 0.29
AFAP1-208ENST00000513856 CEP170Q5SW79 1584 aa16.88■□□□□ 0.29
AFAP1-208ENST00000513856 IGF1RP08069 1367 aa16.85■□□□□ 0.29
AFAP1-208ENST00000513856 SHROOM2Q13796 1616 aa16.83■□□□□ 0.28
AFAP1-208ENST00000513856 KIF27Q86VH2 1401 aa16.8■□□□□ 0.28
AFAP1-208ENST00000513856 ERCC6L2Q5T890 1561 aa16.78■□□□□ 0.28
AFAP1-208ENST00000513856 CYB5RLQ6IPT4 315 aa16.78■□□□□ 0.28
AFAP1-208ENST00000513856 CUL7Q14999 1698 aa16.75■□□□□ 0.27
AFAP1-208ENST00000513856 RUSC2Q8N2Y8 1516 aa16.75■□□□□ 0.27
AFAP1-208ENST00000513856 KIAA0586Q9BVV6 1533 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms