RNA–Protein interactions for RNA: ENST00000513842.1

AFAP1-207, Transcript of actin filament associated protein 1, humanhuman

TSL 2

Gene AFAP1, Length 1,638 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1-207ENST00000513842 NISCHQ9Y2I1 1504 aa35.39■■■■□ 3.26
AFAP1-207ENST00000513842 CCDC180Q9P1Z9 1646 aa31.34■■■□□ 2.61
AFAP1-207ENST00000513842 ABCC9O60706 1549 aa30.66■■■□□ 2.5
AFAP1-207ENST00000513842 DCAF8L2P0C7V8 631 aa29.56■■■□□ 2.32
AFAP1-207ENST00000513842 ZCCHC6Q5VYS8 1495 aaKnown RBP29.5■■■□□ 2.31
AFAP1-207ENST00000513842 RB1CC1Q8TDY2 1594 aa29.44■■■□□ 2.3
AFAP1-207ENST00000513842 NACADO15069 1562 aa29.43■■■□□ 2.3
AFAP1-207ENST00000513842 MYO15BQ96JP2 1530 aa29.26■■■□□ 2.27
AFAP1-207ENST00000513842 DCAF1Q9Y4B6 1507 aa29.21■■■□□ 2.27
AFAP1-207ENST00000513842 UNC13AQ9UPW8 1703 aa28.93■■■□□ 2.22
AFAP1-207ENST00000513842 SCRIBQ14160 1630 aa28.71■■■□□ 2.19
AFAP1-207ENST00000513842 PABPN1Q86U42 306 aaKnown RBP eCLIP28.71■■■□□ 2.19
AFAP1-207ENST00000513842 BICRAQ9NZM4 1560 aa28.67■■■□□ 2.18
AFAP1-207ENST00000513842 SHROOM4Q9ULL8 1493 aa28.42■■■□□ 2.14
AFAP1-207ENST00000513842 DNAJC5BQ9UF47 199 aa28.14■■■□□ 2.09
AFAP1-207ENST00000513842 EIF4G1Q04637 1599 aaKnown RBP27.85■■■□□ 2.05
AFAP1-207ENST00000513842 CC2D2AQ9P2K1 1620 aa27.72■■■□□ 2.03
AFAP1-207ENST00000513842 CECR2Q9BXF3 1484 aa27.64■■■□□ 2.02
AFAP1-207ENST00000513842 SUPT5HO00267 1087 aaKnown RBP27.58■■■□□ 2.01
AFAP1-207ENST00000513842 SMARCA4P51532 1647 aa27.44■■□□□ 1.98
AFAP1-207ENST00000513842 BAZ1AQ9NRL2 1556 aaPredicted RBP27.37■■□□□ 1.97
AFAP1-207ENST00000513842 MROH2BQ7Z745 1585 aa27.34■■□□□ 1.97
AFAP1-207ENST00000513842 ATAD2BQ9ULI0 1458 aa27.26■■□□□ 1.95
AFAP1-207ENST00000513842 NCAPD3P42695 1498 aa27.19■■□□□ 1.94
AFAP1-207ENST00000513842 SMARCA2P51531 1590 aa27.15■■□□□ 1.94
AFAP1-207ENST00000513842 PEG3Q9GZU2 1588 aa27.13■■□□□ 1.93
AFAP1-207ENST00000513842 WIZO95785 1651 aa27.06■■□□□ 1.92
AFAP1-207ENST00000513842 RSF1Q96T23 1441 aaPredicted RBP27.04■■□□□ 1.92
AFAP1-207ENST00000513842 HMGXB3Q12766 1538 aa27.04■■□□□ 1.92
AFAP1-207ENST00000513842 BAZ1BQ9UIG0 1483 aaKnown RBP27.01■■□□□ 1.91
AFAP1-207ENST00000513842 TOP2AP11388 1531 aaKnown RBP26.69■■□□□ 1.86
AFAP1-207ENST00000513842 NESP48681 1621 aa26.62■■□□□ 1.85
AFAP1-207ENST00000513842 CHIC1Q5VXU3 224 aa26.59■■□□□ 1.85
AFAP1-207ENST00000513842 CCDC88BA6NC98 1476 aa26.43■■□□□ 1.82
AFAP1-207ENST00000513842 LAMC3Q9Y6N6 1575 aa26.43■■□□□ 1.82
AFAP1-207ENST00000513842 CADPSQ9ULU8 1353 aa26.41■■□□□ 1.82
AFAP1-207ENST00000513842 ERCC6Q03468 1493 aa26.33■■□□□ 1.81
AFAP1-207ENST00000513842 CFTRP13569 1480 aa26.29■■□□□ 1.8
AFAP1-207ENST00000513842 KIF21AQ7Z4S6 1674 aa26.27■■□□□ 1.8
AFAP1-207ENST00000513842 PDS5BQ9NTI5 1447 aa26.22■■□□□ 1.79
AFAP1-207ENST00000513842 FANCD2Q9BXW9 1451 aa26.12■■□□□ 1.77
AFAP1-207ENST00000513842 THOC2Q8NI27 1593 aaKnown RBP26.12■■□□□ 1.77
AFAP1-207ENST00000513842 PRDM2Q13029 1718 aa26.09■■□□□ 1.77
AFAP1-207ENST00000513842 CEP164Q9UPV0 1460 aa26.04■■□□□ 1.76
AFAP1-207ENST00000513842 MRC2Q9UBG0 1479 aa25.98■■□□□ 1.75
AFAP1-207ENST00000513842 TRIM41Q8WV44 630 aa25.96■■□□□ 1.75
AFAP1-207ENST00000513842 CUX2O14529 1486 aa25.96■■□□□ 1.75
AFAP1-207ENST00000513842 WDR62O43379 1518 aa25.91■■□□□ 1.74
AFAP1-207ENST00000513842 URB2Q14146 1524 aaKnown RBP25.91■■□□□ 1.74
AFAP1-207ENST00000513842 TOPBP1Q92547 1522 aa25.73■■□□□ 1.71
AFAP1-207ENST00000513842 DNMBPQ6XZF7 1577 aa25.68■■□□□ 1.7
AFAP1-207ENST00000513842 CUX1P39880 1505 aa25.62■■□□□ 1.69
AFAP1-207ENST00000513842 ABCC8Q09428 1581 aa25.62■■□□□ 1.69
AFAP1-207ENST00000513842 LOC105371045A0A1W2PR82 267 aa25.53■■□□□ 1.68
AFAP1-207ENST00000513842 POLA1P09884 1462 aaPredicted RBP25.53■■□□□ 1.68
AFAP1-207ENST00000513842 FGD5Q6ZNL6 1462 aa25.49■■□□□ 1.67
AFAP1-207ENST00000513842 IFT140Q96RY7 1462 aa25.48■■□□□ 1.67
AFAP1-207ENST00000513842 ZNF608Q9ULD9 1512 aaPredicted RBP25.48■■□□□ 1.67
AFAP1-207ENST00000513842 TARBP1Q13395 1621 aaKnown RBP25.47■■□□□ 1.67
AFAP1-207ENST00000513842 RAD54L2Q9Y4B4 1467 aa25.47■■□□□ 1.67
AFAP1-207ENST00000513842 SYNJ1O43426 1573 aa25.46■■□□□ 1.67
AFAP1-207ENST00000513842 WRNQ14191 1432 aaPredicted RBP eCLIP25.45■■□□□ 1.66
AFAP1-207ENST00000513842 FAM9AQ8IZU1 332 aaPredicted RBP25.42■■□□□ 1.66
AFAP1-207ENST00000513842 DNAJC5Q9H3Z4 198 aa25.41■■□□□ 1.66
AFAP1-207ENST00000513842 SOGA1O94964 1423 aa25.41■■□□□ 1.66
AFAP1-207ENST00000513842 TOP2BQ02880 1626 aa25.39■■□□□ 1.65
AFAP1-207ENST00000513842 BIVM-ERCC5R4GMW8 1640 aa25.39■■□□□ 1.65
AFAP1-207ENST00000513842 AQRO60306 1485 aaKnown RBP eCLIP25.33■■□□□ 1.65
AFAP1-207ENST00000513842 EEA1Q15075 1411 aa25.33■■□□□ 1.65
AFAP1-207ENST00000513842 EIF4G3O43432 1585 aaKnown RBP25.32■■□□□ 1.64
AFAP1-207ENST00000513842 TDRD9Q8NDG6 1382 aaKnown RBP25.3■■□□□ 1.64
AFAP1-207ENST00000513842 WDR97A6NE52 1622 aa25.28■■□□□ 1.64
AFAP1-207ENST00000513842 ABCA10Q8WWZ4 1543 aa25.21■■□□□ 1.63
AFAP1-207ENST00000513842 ABCA5Q8WWZ7 1642 aa25.13■■□□□ 1.61
AFAP1-207ENST00000513842 GAPVD1Q14C86 1478 aa25.11■■□□□ 1.61
AFAP1-207ENST00000513842 CSRNP3Q8WYN3 585 aa25.09■■□□□ 1.61
AFAP1-207ENST00000513842 PBRM1Q86U86 1689 aa25.07■■□□□ 1.6
AFAP1-207ENST00000513842 GRIN2BQ13224 1484 aa25.06■■□□□ 1.6
AFAP1-207ENST00000513842 SNAPC4Q5SXM2 1469 aa25.05■■□□□ 1.6
AFAP1-207ENST00000513842 CHD1O14646 1710 aa25.01■■□□□ 1.59
AFAP1-207ENST00000513842 EHMT2Q96KQ7 1210 aa25■■□□□ 1.59
AFAP1-207ENST00000513842 RUSC2Q8N2Y8 1516 aa24.99■■□□□ 1.59
AFAP1-207ENST00000513842 FBLN2P98095 1184 aa24.97■■□□□ 1.59
AFAP1-207ENST00000513842 MAGI1Q96QZ7 1491 aaPredicted RBP24.96■■□□□ 1.59
AFAP1-207ENST00000513842 OSCARQ8IYS5 282 aa24.96■■□□□ 1.59
AFAP1-207ENST00000513842 GOLGA3Q08378 1498 aa24.95■■□□□ 1.58
AFAP1-207ENST00000513842 TNIKQ9UKE5 1360 aa24.93■■□□□ 1.58
AFAP1-207ENST00000513842 KIF21BO75037 1637 aa24.9■■□□□ 1.58
AFAP1-207ENST00000513842 SYNJ2O15056 1496 aa24.89■■□□□ 1.58
AFAP1-207ENST00000513842 ERICH3Q5RHP9 1530 aa24.89■■□□□ 1.57
AFAP1-207ENST00000513842 CHMP7Q8WUX9 453 aaPredicted RBP24.87■■□□□ 1.57
AFAP1-207ENST00000513842 ADAMTS12P58397 1594 aa24.87■■□□□ 1.57
AFAP1-207ENST00000513842 KIF27Q86VH2 1401 aa24.87■■□□□ 1.57
AFAP1-207ENST00000513842 IGF1RP08069 1367 aa24.83■■□□□ 1.57
AFAP1-207ENST00000513842 UBTFP17480 764 aaKnown RBP24.82■■□□□ 1.56
AFAP1-207ENST00000513842 PCGF6Q9BYE7 350 aa24.81■■□□□ 1.56
AFAP1-207ENST00000513842 FHAD1B1AJZ9 1412 aa24.8■■□□□ 1.56
AFAP1-207ENST00000513842 TRIM26Q12899 539 aaPredicted RBP24.79■■□□□ 1.56
AFAP1-207ENST00000513842 CEP162Q5TB80 1403 aa24.78■■□□□ 1.56
AFAP1-207ENST00000513842 GRIN2AQ12879 1464 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 170.8 ms