RNA–Protein interactions for RNA: ENST00000513356.1

NSA2-202, Transcript of NSA2, ribosome biogenesis homolog, humanhuman

TSL 3

Gene NSA2, Length 797 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSA2-202ENST00000513356 AEBP2Q6ZN18 517 aaPredicted RBP23.96■■□□□ 1.43
NSA2-202ENST00000513356 CHIC1Q5VXU3 224 aa23.17■■□□□ 1.3
NSA2-202ENST00000513356 PHF23Q9BUL5 403 aaPredicted RBP20.37■□□□□ 0.85
NSA2-202ENST00000513356 SENP3Q9H4L4 574 aaPredicted RBP20.34■□□□□ 0.85
NSA2-202ENST00000513356 FOXD1Q16676 465 aa18.92■□□□□ 0.62
NSA2-202ENST00000513356 PLPPR3Q6T4P5 718 aa18.71■□□□□ 0.59
NSA2-202ENST00000513356 PPP6R1Q9UPN7 881 aa18.04■□□□□ 0.48
NSA2-202ENST00000513356 ADRA2BP18089 450 aa18.02■□□□□ 0.48
NSA2-202ENST00000513356 PIAS4Q8N2W9 510 aaPredicted RBP17.79■□□□□ 0.44
NSA2-202ENST00000513356 DNAJC5BQ9UF47 199 aa17.61■□□□□ 0.41
NSA2-202ENST00000513356 MSH5O43196 834 aa17.51■□□□□ 0.39
NSA2-202ENST00000513356 ABCC9O60706 1549 aa17.33■□□□□ 0.37
NSA2-202ENST00000513356 NISCHQ9Y2I1 1504 aa17.16■□□□□ 0.34
NSA2-202ENST00000513356 DNAJC5Q9H3Z4 198 aa16.99■□□□□ 0.31
NSA2-202ENST00000513356 PPP4R3CPQ6ZMV5 832 aa16.48■□□□□ 0.23
NSA2-202ENST00000513356 SCAF1Q9H7N4 1312 aaKnown RBP16.45■□□□□ 0.22
NSA2-202ENST00000513356 MAPK8IP2Q13387 824 aaPredicted RBP16.41■□□□□ 0.22
NSA2-202ENST00000513356 POTEDQ86YR6 584 aa16.33■□□□□ 0.2
NSA2-202ENST00000513356 DMRT2Q9Y5R5 561 aa16.21■□□□□ 0.19
NSA2-202ENST00000513356 CNKSR2Q8WXI2 1034 aa16.04■□□□□ 0.16
NSA2-202ENST00000513356 PABPN1Q86U42 306 aaKnown RBP eCLIP16.01■□□□□ 0.15
NSA2-202ENST00000513356 NCBP3Q53F19 620 aaKnown RBP15.96■□□□□ 0.15
NSA2-202ENST00000513356 KCNA4P22459 653 aa15.88■□□□□ 0.13
NSA2-202ENST00000513356 CCDC180Q9P1Z9 1646 aa15.84■□□□□ 0.13
NSA2-202ENST00000513356 HOXD11P31277 338 aaPredicted RBP15.79■□□□□ 0.12
NSA2-202ENST00000513356 RNF216Q9NWF9 866 aaPredicted RBP15.79■□□□□ 0.12
NSA2-202ENST00000513356 RB1CC1Q8TDY2 1594 aa15.76■□□□□ 0.11
NSA2-202ENST00000513356 NPM3O75607 178 aaKnown RBP15.76■□□□□ 0.11
NSA2-202ENST00000513356 TRIM41Q8WV44 630 aa15.71■□□□□ 0.11
NSA2-202ENST00000513356 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.1
NSA2-202ENST00000513356 CC2D2AQ9P2K1 1620 aa15.53■□□□□ 0.08
NSA2-202ENST00000513356 DCAF8L1A6NGE4 600 aa15.52■□□□□ 0.08
NSA2-202ENST00000513356 BICRAQ9NZM4 1560 aa15.49■□□□□ 0.07
NSA2-202ENST00000513356 UNC13AQ9UPW8 1703 aa15.46■□□□□ 0.07
NSA2-202ENST00000513356 CUX2O14529 1486 aa15.35■□□□□ 0.05
NSA2-202ENST00000513356 NACADO15069 1562 aa15.33■□□□□ 0.05
NSA2-202ENST00000513356 EIF4G1Q04637 1599 aaKnown RBP15.15■□□□□ 0.02
NSA2-202ENST00000513356 DCAF8L2P0C7V8 631 aa15.15■□□□□ 0.02
NSA2-202ENST00000513356 SLC4A1APQ9BWU0 796 aaKnown RBP15.15■□□□□ 0.02
NSA2-202ENST00000513356 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.04■□□□□ -08e-7■■□□□ 11.5
NSA2-202ENST00000513356 RNF39Q9H2S5 420 aa14.99□□□□□ -0.01
NSA2-202ENST00000513356 ERCC6Q03468 1493 aa14.95□□□□□ -0.02
NSA2-202ENST00000513356 SLC4A2P04920 1241 aa14.94□□□□□ -0.02
NSA2-202ENST00000513356 SHROOM4Q9ULL8 1493 aa14.92□□□□□ -0.02
NSA2-202ENST00000513356 ILDR1Q86SU0 546 aaPredicted RBP14.82□□□□□ -0.04
NSA2-202ENST00000513356 U3KPZ7 1027 aaPredicted RBP14.8□□□□□ -0.04
NSA2-202ENST00000513356 C1QBPQ07021 282 aaKnown RBP14.79□□□□□ -0.04
NSA2-202ENST00000513356 CACNB1Q02641 598 aaPredicted RBP14.75□□□□□ -0.05
NSA2-202ENST00000513356 EHMT2Q96KQ7 1210 aa14.75□□□□□ -0.05
NSA2-202ENST00000513356 MYO15BQ96JP2 1530 aa14.66□□□□□ -0.06
NSA2-202ENST00000513356 FOXD4L1Q9NU39 408 aa14.65□□□□□ -0.06
NSA2-202ENST00000513356 ZBTB22O15209 634 aa14.62□□□□□ -0.07
NSA2-202ENST00000513356 CSRNP3Q8WYN3 585 aa14.57□□□□□ -0.08
NSA2-202ENST00000513356 MYCNP04198 464 aaPredicted RBP14.56□□□□□ -0.08
NSA2-202ENST00000513356 THOC2Q8NI27 1593 aaKnown RBP14.56□□□□□ -0.08
NSA2-202ENST00000513356 NESP48681 1621 aa14.55□□□□□ -0.08
NSA2-202ENST00000513356 SCRIBQ14160 1630 aa14.55□□□□□ -0.08
NSA2-202ENST00000513356 TRHP20396 242 aaPredicted RBP14.54□□□□□ -0.08
NSA2-202ENST00000513356 OSCARQ8IYS5 282 aa14.5□□□□□ -0.09
NSA2-202ENST00000513356 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.49□□□□□ -0.09
NSA2-202ENST00000513356 HNRNPUL2Q1KMD3 747 aaKnown RBP14.49□□□□□ -0.09
NSA2-202ENST00000513356 RIMBP3CA6NJZ7 1639 aa14.46□□□□□ -0.09
NSA2-202ENST00000513356 RIMBP3BA6NNM3 1639 aa14.46□□□□□ -0.09
NSA2-202ENST00000513356 RIMBP3Q9UFD9 1639 aa14.46□□□□□ -0.09
NSA2-202ENST00000513356 SPINK5Q9NQ38 1064 aaPredicted RBP14.45□□□□□ -0.1
NSA2-202ENST00000513356 SAMD1Q6SPF0 538 aaPredicted RBP14.44□□□□□ -0.1
NSA2-202ENST00000513356 BAZ1AQ9NRL2 1556 aaPredicted RBP14.41□□□□□ -0.1
NSA2-202ENST00000513356 CAPN15O75808 1086 aa14.39□□□□□ -0.11
NSA2-202ENST00000513356 APLP2Q06481 763 aa14.39□□□□□ -0.11
NSA2-202ENST00000513356 SMARCA2P51531 1590 aa14.34□□□□□ -0.11
NSA2-202ENST00000513356 CYB5RLQ6IPT4 315 aa14.33□□□□□ -0.12
NSA2-202ENST00000513356 ARHGEF11O15085 1522 aa14.28□□□□□ -0.12
NSA2-202ENST00000513356 NCAPD3P42695 1498 aa14.25□□□□□ -0.13
NSA2-202ENST00000513356 ZNF219Q9P2Y4 722 aaPredicted RBP14.25□□□□□ -0.13
NSA2-202ENST00000513356 KIF21AQ7Z4S6 1674 aa14.2□□□□□ -0.14
NSA2-202ENST00000513356 ATF5Q9Y2D1 282 aaPredicted RBP14.2□□□□□ -0.14
NSA2-202ENST00000513356 DSG3P32926 999 aa14.19□□□□□ -0.14
NSA2-202ENST00000513356 ATXN8OSP0DMR3 200 aa14.14□□□□□ -0.15
NSA2-202ENST00000513356 ABCB7O75027 752 aa14.12□□□□□ -0.15
NSA2-202ENST00000513356 ARAP1Q96P48 1450 aa14.08□□□□□ -0.16
NSA2-202ENST00000513356 LAMC3Q9Y6N6 1575 aa14.05□□□□□ -0.16
NSA2-202ENST00000513356 PDS5BQ9NTI5 1447 aa14.05□□□□□ -0.16
NSA2-202ENST00000513356 ATAD2BQ9ULI0 1458 aa14.05□□□□□ -0.16
NSA2-202ENST00000513356 WDR62O43379 1518 aa14.04□□□□□ -0.16
NSA2-202ENST00000513356 MRC2Q9UBG0 1479 aa14.03□□□□□ -0.16
NSA2-202ENST00000513356 DCAF1Q9Y4B6 1507 aa14.01□□□□□ -0.17
NSA2-202ENST00000513356 POLA2Q14181 598 aa13.99□□□□□ -0.17
NSA2-202ENST00000513356 HMGXB3Q12766 1538 aa13.95□□□□□ -0.18
NSA2-202ENST00000513356 ZCCHC6Q5VYS8 1495 aaKnown RBP13.93□□□□□ -0.18
NSA2-202ENST00000513356 KDM4FA0A1W2PPD8 638 aa13.92□□□□□ -0.18
NSA2-202ENST00000513356 LMTK3Q96Q04 1460 aa13.86□□□□□ -0.19
NSA2-202ENST00000513356 SOCS7O14512 581 aa13.84□□□□□ -0.19
NSA2-202ENST00000513356 ILDR2Q71H61 639 aa13.83□□□□□ -0.2
NSA2-202ENST00000513356 FBXO41Q8TF61 875 aa13.81□□□□□ -0.2
NSA2-202ENST00000513356 BAZ1BQ9UIG0 1483 aaKnown RBP13.78□□□□□ -0.2
NSA2-202ENST00000513356 CADPSQ9ULU8 1353 aa13.76□□□□□ -0.21
NSA2-202ENST00000513356 ZBTB12Q9Y330 459 aaPredicted RBP13.72□□□□□ -0.21
NSA2-202ENST00000513356 RSF1Q96T23 1441 aaPredicted RBP13.72□□□□□ -0.21
NSA2-202ENST00000513356 ZNF608Q9ULD9 1512 aaPredicted RBP13.71□□□□□ -0.21
NSA2-202ENST00000513356 SMARCA4P51532 1647 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms