RNA–Protein interactions for RNA: ENST00000512493.5

RPS23-208, Transcript of ribosomal protein S23, humanhuman

TSL 3 BASIC

Gene RPS23, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS23-208ENST00000512493 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.68□□□□□ -1.349e-74■□□□□ 10.6
RPS23-208ENST00000512493 PABPC4Q13310 644 aaKnown RBP eCLIP8.91□□□□□ -0.987e-50■■■□□ 16.2
RPS23-208ENST00000512493 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.69□□□□□ -1.182e-41■□□□□ 9.4
RPS23-208ENST00000512493 NOLC1Q14978 699 aaKnown RBP eCLIP7.81□□□□□ -1.165e-36■□□□□ 9.5
RPS23-208ENST00000512493 DDX3XO00571 662 aaKnown RBP eCLIP7.56□□□□□ -1.29e-35■■□□□ 12.6
RPS23-208ENST00000512493 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.44□□□□□ -1.061e-32■■□□□ 14.5
RPS23-208ENST00000512493 LARP4Q71RC2 724 aaKnown RBP eCLIP6.8□□□□□ -1.327e-30■□□□□ 9.4
RPS23-208ENST00000512493 YBX3P16989 372 aaKnown RBP eCLIP10.21□□□□□ -0.772e-22■□□□□ 9.2
RPS23-208ENST00000512493 SUB1P53999 127 aaKnown RBP eCLIP5.57□□□□□ -1.523e-22■■■■■ 29.4
RPS23-208ENST00000512493 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.86□□□□□ -1.312e-18■□□□□ 9.1
RPS23-208ENST00000512493 SND1Q7KZF4 910 aaKnown RBP eCLIP7.45□□□□□ -1.226e-15■■■□□ 15.4
RPS23-208ENST00000512493 EIF3GO75821 320 aaKnown RBP eCLIP5.57□□□□□ -1.528e-15■■■□□ 15.4
RPS23-208ENST00000512493 RBM22Q9NW64 420 aaKnown RBP eCLIP7.22□□□□□ -1.259e-15■■■■■ 30.1
RPS23-208ENST00000512493 RPS3P23396 243 aaKnown RBP eCLIP6.96□□□□□ -1.31e-13■□□□□ 10.4
RPS23-208ENST00000512493 GTF2F1P35269 517 aaKnown RBP eCLIP8.35□□□□□ -1.072e-13■■■■□ 26.5
RPS23-208ENST00000512493 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.01□□□□□ -1.136e-13■■■□□ 14.8
RPS23-208ENST00000512493 SRSF7Q16629 238 aaKnown RBP eCLIP5.83□□□□□ -1.482e-11■□□□□ 8.8
RPS23-208ENST00000512493 PRPF4O43172 522 aaKnown RBP eCLIP7□□□□□ -1.297e-11■■■■□ 26
RPS23-208ENST00000512493 PCBP2Q15366 365 aaKnown RBP eCLIP6.86□□□□□ -1.311e-10■■■■□ 24
RPS23-208ENST00000512493 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.33□□□□□ -1.44e-10■■■■■ 28.1
RPS23-208ENST00000512493 EFTUD2Q15029 972 aaKnown RBP eCLIP7.17□□□□□ -1.265e-10■■■■□ 20.9
RPS23-208ENST00000512493 FUSP35637 526 aaKnown RBP eCLIP4.99□□□□□ -1.618e-10■■■■■ 28.6
RPS23-208ENST00000512493 FMR1Q06787 632 aaKnown RBP eCLIP9.62□□□□□ -0.871e-9■■□□□ 13.7
RPS23-208ENST00000512493 AQRO60306 1485 aaKnown RBP eCLIP13.47□□□□□ -0.251e-9■■■□□ 16.5
RPS23-208ENST00000512493 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.96□□□□□ -0.982e-9■□□□□ 9.1
RPS23-208ENST00000512493 CSTF2P33240 577 aaKnown RBP eCLIP7.2□□□□□ -1.268e-9■■■■■ 27.4
RPS23-208ENST00000512493 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.05□□□□□ -1.121e-8■□□□□ 8.9
RPS23-208ENST00000512493 TIA1P31483 386 aaKnown RBP eCLIP6.75□□□□□ -1.333e-8■■■□□ 15
RPS23-208ENST00000512493 IGF2BP3O00425 579 aaKnown RBP eCLIP9.24□□□□□ -0.931e-7■□□□□ 9.5
RPS23-208ENST00000512493 SF3B4Q15427 424 aaKnown RBP eCLIP6.57□□□□□ -1.366e-6■■■■■ 29
Retrieved 30 of 30 RNA–protein pairs in 7 ms