RNA–Protein interactions for RNA: ENST00000512100.5

SH3TC1-221, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-221ENST00000512100 NISCHQ9Y2I1 1504 aa34.88■■■■□ 3.17
SH3TC1-221ENST00000512100 CCDC180Q9P1Z9 1646 aa31.09■■■□□ 2.57
SH3TC1-221ENST00000512100 ABCC9O60706 1549 aa30.71■■■□□ 2.51
SH3TC1-221ENST00000512100 RB1CC1Q8TDY2 1594 aa29.28■■■□□ 2.28
SH3TC1-221ENST00000512100 NACADO15069 1562 aa29.19■■■□□ 2.26
SH3TC1-221ENST00000512100 MYO15BQ96JP2 1530 aa29.17■■■□□ 2.26
SH3TC1-221ENST00000512100 ZCCHC6Q5VYS8 1495 aaKnown RBP29.11■■■□□ 2.25
SH3TC1-221ENST00000512100 DCAF8L2P0C7V8 631 aa29.04■■■□□ 2.24
SH3TC1-221ENST00000512100 DCAF1Q9Y4B6 1507 aa29.03■■■□□ 2.24
SH3TC1-221ENST00000512100 UNC13AQ9UPW8 1703 aa28.69■■■□□ 2.18
SH3TC1-221ENST00000512100 PABPN1Q86U42 306 aaKnown RBP eCLIP28.62■■■□□ 2.17
SH3TC1-221ENST00000512100 DNAJC5BQ9UF47 199 aa28.62■■■□□ 2.17
SH3TC1-221ENST00000512100 BICRAQ9NZM4 1560 aa28.47■■■□□ 2.15
SH3TC1-221ENST00000512100 SCRIBQ14160 1630 aa28.21■■■□□ 2.11
SH3TC1-221ENST00000512100 SHROOM4Q9ULL8 1493 aa28.2■■■□□ 2.1
SH3TC1-221ENST00000512100 CC2D2AQ9P2K1 1620 aa27.75■■■□□ 2.03
SH3TC1-221ENST00000512100 EIF4G1Q04637 1599 aaKnown RBP27.73■■■□□ 2.03
SH3TC1-221ENST00000512100 CECR2Q9BXF3 1484 aa27.62■■■□□ 2.01
SH3TC1-221ENST00000512100 BAZ1AQ9NRL2 1556 aaPredicted RBP27.08■■□□□ 1.93
SH3TC1-221ENST00000512100 SMARCA4P51532 1647 aa27.05■■□□□ 1.92
SH3TC1-221ENST00000512100 SMARCA2P51531 1590 aa26.92■■□□□ 1.9
SH3TC1-221ENST00000512100 NCAPD3P42695 1498 aa26.91■■□□□ 1.9
SH3TC1-221ENST00000512100 PEG3Q9GZU2 1588 aa26.89■■□□□ 1.9
SH3TC1-221ENST00000512100 ATAD2BQ9ULI0 1458 aa26.87■■□□□ 1.89
SH3TC1-221ENST00000512100 HMGXB3Q12766 1538 aa26.83■■□□□ 1.89
SH3TC1-221ENST00000512100 MROH2BQ7Z745 1585 aa26.8■■□□□ 1.88
SH3TC1-221ENST00000512100 BAZ1BQ9UIG0 1483 aaKnown RBP26.66■■□□□ 1.86
SH3TC1-221ENST00000512100 RSF1Q96T23 1441 aaPredicted RBP26.56■■□□□ 1.84
SH3TC1-221ENST00000512100 WIZO95785 1651 aa26.48■■□□□ 1.83
SH3TC1-221ENST00000512100 ERCC6Q03468 1493 aa26.47■■□□□ 1.83
SH3TC1-221ENST00000512100 NESP48681 1621 aa26.47■■□□□ 1.83
SH3TC1-221ENST00000512100 TOP2AP11388 1531 aaKnown RBP26.34■■□□□ 1.81
SH3TC1-221ENST00000512100 CUX2O14529 1486 aa26.33■■□□□ 1.81
SH3TC1-221ENST00000512100 LAMC3Q9Y6N6 1575 aa26.25■■□□□ 1.79
SH3TC1-221ENST00000512100 THOC2Q8NI27 1593 aaKnown RBP26.15■■□□□ 1.78
SH3TC1-221ENST00000512100 KIF21AQ7Z4S6 1674 aa26.13■■□□□ 1.77
SH3TC1-221ENST00000512100 PDS5BQ9NTI5 1447 aa26.08■■□□□ 1.77
SH3TC1-221ENST00000512100 CADPSQ9ULU8 1353 aa26.07■■□□□ 1.76
SH3TC1-221ENST00000512100 DNAJC5Q9H3Z4 198 aa26.06■■□□□ 1.76
SH3TC1-221ENST00000512100 CFTRP13569 1480 aa25.98■■□□□ 1.75
SH3TC1-221ENST00000512100 CCDC88BA6NC98 1476 aa25.94■■□□□ 1.74
SH3TC1-221ENST00000512100 MRC2Q9UBG0 1479 aa25.87■■□□□ 1.73
SH3TC1-221ENST00000512100 FANCD2Q9BXW9 1451 aa25.81■■□□□ 1.72
SH3TC1-221ENST00000512100 CEP164Q9UPV0 1460 aa25.81■■□□□ 1.72
SH3TC1-221ENST00000512100 WDR62O43379 1518 aa25.81■■□□□ 1.72
SH3TC1-221ENST00000512100 PRDM2Q13029 1718 aa25.8■■□□□ 1.72
SH3TC1-221ENST00000512100 SUPT5HO00267 1087 aaKnown RBP25.74■■□□□ 1.71
SH3TC1-221ENST00000512100 URB2Q14146 1524 aaKnown RBP25.61■■□□□ 1.69
SH3TC1-221ENST00000512100 ABCC8Q09428 1581 aa25.49■■□□□ 1.67
SH3TC1-221ENST00000512100 DNMBPQ6XZF7 1577 aa25.38■■□□□ 1.65
SH3TC1-221ENST00000512100 TOPBP1Q92547 1522 aa25.35■■□□□ 1.65
SH3TC1-221ENST00000512100 IFT140Q96RY7 1462 aa25.27■■□□□ 1.64
SH3TC1-221ENST00000512100 ZNF608Q9ULD9 1512 aaPredicted RBP25.26■■□□□ 1.63
SH3TC1-221ENST00000512100 CUX1P39880 1505 aa25.17■■□□□ 1.62
SH3TC1-221ENST00000512100 POLA1P09884 1462 aaPredicted RBP25.15■■□□□ 1.62
SH3TC1-221ENST00000512100 EIF4G3O43432 1585 aaKnown RBP25.14■■□□□ 1.61
SH3TC1-221ENST00000512100 OSCARQ8IYS5 282 aa25.13■■□□□ 1.61
SH3TC1-221ENST00000512100 TARBP1Q13395 1621 aaKnown RBP25.12■■□□□ 1.61
SH3TC1-221ENST00000512100 WDR97A6NE52 1622 aa25.08■■□□□ 1.6
SH3TC1-221ENST00000512100 FGD5Q6ZNL6 1462 aa25.07■■□□□ 1.6
SH3TC1-221ENST00000512100 WRNQ14191 1432 aaPredicted RBP eCLIP25.06■■□□□ 1.6
SH3TC1-221ENST00000512100 TRIM41Q8WV44 630 aa25.06■■□□□ 1.6
SH3TC1-221ENST00000512100 BIVM-ERCC5R4GMW8 1640 aa25.04■■□□□ 1.6
SH3TC1-221ENST00000512100 AQRO60306 1485 aaKnown RBP eCLIP25.04■■□□□ 1.63e-8■■■■□ 20.9
SH3TC1-221ENST00000512100 TOP2BQ02880 1626 aa25.04■■□□□ 1.6
SH3TC1-221ENST00000512100 RAD54L2Q9Y4B4 1467 aa25.03■■□□□ 1.6
SH3TC1-221ENST00000512100 SOGA1O94964 1423 aa25.02■■□□□ 1.6
SH3TC1-221ENST00000512100 SYNJ1O43426 1573 aa24.94■■□□□ 1.58
SH3TC1-221ENST00000512100 CHD1O14646 1710 aa24.92■■□□□ 1.58
SH3TC1-221ENST00000512100 TDRD9Q8NDG6 1382 aaKnown RBP24.92■■□□□ 1.58
SH3TC1-221ENST00000512100 ABCA10Q8WWZ4 1543 aa24.91■■□□□ 1.58
SH3TC1-221ENST00000512100 RIMBP3CA6NJZ7 1639 aa24.86■■□□□ 1.57
SH3TC1-221ENST00000512100 RIMBP3BA6NNM3 1639 aa24.86■■□□□ 1.57
SH3TC1-221ENST00000512100 RIMBP3Q9UFD9 1639 aa24.86■■□□□ 1.57
SH3TC1-221ENST00000512100 FBLN2P98095 1184 aa24.81■■□□□ 1.56
SH3TC1-221ENST00000512100 SNAPC4Q5SXM2 1469 aa24.81■■□□□ 1.56
SH3TC1-221ENST00000512100 ARHGEF11O15085 1522 aa24.8■■□□□ 1.56
SH3TC1-221ENST00000512100 ABCA5Q8WWZ7 1642 aa24.79■■□□□ 1.56
SH3TC1-221ENST00000512100 GRIN2BQ13224 1484 aa24.78■■□□□ 1.56
SH3TC1-221ENST00000512100 GAPVD1Q14C86 1478 aa24.76■■□□□ 1.55
SH3TC1-221ENST00000512100 MAGI1Q96QZ7 1491 aaPredicted RBP24.76■■□□□ 1.55
SH3TC1-221ENST00000512100 PBRM1Q86U86 1689 aa24.71■■□□□ 1.55
SH3TC1-221ENST00000512100 ERICH3Q5RHP9 1530 aa24.65■■□□□ 1.54
SH3TC1-221ENST00000512100 CHMP7Q8WUX9 453 aaPredicted RBP24.64■■□□□ 1.54
SH3TC1-221ENST00000512100 SYNJ2O15056 1496 aa24.63■■□□□ 1.53
SH3TC1-221ENST00000512100 CLASP1Q7Z460 1538 aa24.61■■□□□ 1.53
SH3TC1-221ENST00000512100 ARAP1Q96P48 1450 aa24.58■■□□□ 1.53
SH3TC1-221ENST00000512100 CYB5RLQ6IPT4 315 aa24.57■■□□□ 1.52
SH3TC1-221ENST00000512100 KIF27Q86VH2 1401 aa24.56■■□□□ 1.52
SH3TC1-221ENST00000512100 ADAMTS12P58397 1594 aa24.54■■□□□ 1.52
SH3TC1-221ENST00000512100 FHAD1B1AJZ9 1412 aa24.52■■□□□ 1.52
SH3TC1-221ENST00000512100 GRIN2AQ12879 1464 aa24.45■■□□□ 1.5
SH3TC1-221ENST00000512100 CUL7Q14999 1698 aa24.43■■□□□ 1.5
SH3TC1-221ENST00000512100 IGF1RP08069 1367 aa24.4■■□□□ 1.5
SH3TC1-221ENST00000512100 CEP170Q5SW79 1584 aa24.37■■□□□ 1.49
SH3TC1-221ENST00000512100 NUP160Q12769 1436 aa24.36■■□□□ 1.49
SH3TC1-221ENST00000512100 ERCC6L2Q5T890 1561 aa24.29■■□□□ 1.48
SH3TC1-221ENST00000512100 CARMIL1Q5VZK9 1371 aa24.26■■□□□ 1.47
SH3TC1-221ENST00000512100 EEA1Q15075 1411 aa24.24■■□□□ 1.47
SH3TC1-221ENST00000512100 TRHP20396 242 aaPredicted RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms