RNA–Protein interactions for RNA: ENST00000511963.5

CMBL-206, Transcript of carboxymethylenebutenolidase homolog, humanhuman

TSL 3

Gene CMBL, Length 796 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMBL-206ENST00000511963 NISCHQ9Y2I1 1504 aa23.26■■□□□ 1.31
CMBL-206ENST00000511963 CCDC180Q9P1Z9 1646 aa20.82■□□□□ 0.92
CMBL-206ENST00000511963 ABCC9O60706 1549 aa20.58■□□□□ 0.89
CMBL-206ENST00000511963 RB1CC1Q8TDY2 1594 aa19.74■□□□□ 0.75
CMBL-206ENST00000511963 NACADO15069 1562 aa19.66■□□□□ 0.74
CMBL-206ENST00000511963 DCAF8L2P0C7V8 631 aa19.56■□□□□ 0.72
CMBL-206ENST00000511963 MYO15BQ96JP2 1530 aa19.47■□□□□ 0.71
CMBL-206ENST00000511963 ZCCHC6Q5VYS8 1495 aaKnown RBP19.29■□□□□ 0.68
CMBL-206ENST00000511963 DCAF1Q9Y4B6 1507 aa19.27■□□□□ 0.68
CMBL-206ENST00000511963 UNC13AQ9UPW8 1703 aa19.22■□□□□ 0.67
CMBL-206ENST00000511963 PABPN1Q86U42 306 aaKnown RBP eCLIP19.2■□□□□ 0.66
CMBL-206ENST00000511963 DNAJC5BQ9UF47 199 aa19.16■□□□□ 0.66
CMBL-206ENST00000511963 BICRAQ9NZM4 1560 aa19.1■□□□□ 0.65
CMBL-206ENST00000511963 SHROOM4Q9ULL8 1493 aa18.96■□□□□ 0.63
CMBL-206ENST00000511963 SCRIBQ14160 1630 aa18.9■□□□□ 0.62
CMBL-206ENST00000511963 EIF4G1Q04637 1599 aaKnown RBP18.64■□□□□ 0.57
CMBL-206ENST00000511963 CC2D2AQ9P2K1 1620 aa18.63■□□□□ 0.57
CMBL-206ENST00000511963 CECR2Q9BXF3 1484 aa18.56■□□□□ 0.56
CMBL-206ENST00000511963 NCAPD3P42695 1498 aa18.14■□□□□ 0.5
CMBL-206ENST00000511963 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
CMBL-206ENST00000511963 ATAD2BQ9ULI0 1458 aa18.07■□□□□ 0.48
CMBL-206ENST00000511963 SMARCA2P51531 1590 aa18.07■□□□□ 0.48
CMBL-206ENST00000511963 BAZ1AQ9NRL2 1556 aaPredicted RBP18.06■□□□□ 0.48
CMBL-206ENST00000511963 HMGXB3Q12766 1538 aa18■□□□□ 0.47
CMBL-206ENST00000511963 PEG3Q9GZU2 1588 aa17.95■□□□□ 0.46
CMBL-206ENST00000511963 BAZ1BQ9UIG0 1483 aaKnown RBP17.91■□□□□ 0.46
CMBL-206ENST00000511963 MROH2BQ7Z745 1585 aa17.89■□□□□ 0.45
CMBL-206ENST00000511963 ERCC6Q03468 1493 aa17.8■□□□□ 0.44
CMBL-206ENST00000511963 CUX2O14529 1486 aa17.74■□□□□ 0.43
CMBL-206ENST00000511963 NESP48681 1621 aa17.72■□□□□ 0.43
CMBL-206ENST00000511963 LAMC3Q9Y6N6 1575 aa17.7■□□□□ 0.42
CMBL-206ENST00000511963 WIZO95785 1651 aa17.67■□□□□ 0.42
CMBL-206ENST00000511963 PDS5BQ9NTI5 1447 aa17.62■□□□□ 0.41
CMBL-206ENST00000511963 CADPSQ9ULU8 1353 aa17.6■□□□□ 0.41
CMBL-206ENST00000511963 RSF1Q96T23 1441 aaPredicted RBP17.6■□□□□ 0.41
CMBL-206ENST00000511963 DNAJC5Q9H3Z4 198 aa17.55■□□□□ 0.4
CMBL-206ENST00000511963 THOC2Q8NI27 1593 aaKnown RBP17.52■□□□□ 0.39
CMBL-206ENST00000511963 KIF21AQ7Z4S6 1674 aa17.5■□□□□ 0.39
CMBL-206ENST00000511963 TOP2AP11388 1531 aaKnown RBP17.49■□□□□ 0.39
CMBL-206ENST00000511963 AEBP2Q6ZN18 517 aaPredicted RBP17.47■□□□□ 0.39
CMBL-206ENST00000511963 CFTRP13569 1480 aa17.42■□□□□ 0.38
CMBL-206ENST00000511963 MRC2Q9UBG0 1479 aa17.41■□□□□ 0.38
CMBL-206ENST00000511963 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
CMBL-206ENST00000511963 FANCD2Q9BXW9 1451 aa17.36■□□□□ 0.37
CMBL-206ENST00000511963 WDR62O43379 1518 aa17.36■□□□□ 0.37
CMBL-206ENST00000511963 CHIC1Q5VXU3 224 aa17.3■□□□□ 0.36
CMBL-206ENST00000511963 CCDC88BA6NC98 1476 aa17.3■□□□□ 0.36
CMBL-206ENST00000511963 PRDM2Q13029 1718 aa17.24■□□□□ 0.35
CMBL-206ENST00000511963 URB2Q14146 1524 aaKnown RBP17.18■□□□□ 0.34
CMBL-206ENST00000511963 ABCC8Q09428 1581 aa17.11■□□□□ 0.33
CMBL-206ENST00000511963 TOPBP1Q92547 1522 aa17.05■□□□□ 0.32
CMBL-206ENST00000511963 IFT140Q96RY7 1462 aa17.04■□□□□ 0.32
CMBL-206ENST00000511963 DNMBPQ6XZF7 1577 aa17.01■□□□□ 0.31
CMBL-206ENST00000511963 OSCARQ8IYS5 282 aa16.99■□□□□ 0.31
CMBL-206ENST00000511963 SUPT5HO00267 1087 aaKnown RBP16.94■□□□□ 0.3
CMBL-206ENST00000511963 ZNF608Q9ULD9 1512 aaPredicted RBP16.93■□□□□ 0.3
CMBL-206ENST00000511963 POLA1P09884 1462 aaPredicted RBP16.88■□□□□ 0.29
CMBL-206ENST00000511963 TARBP1Q13395 1621 aaKnown RBP16.88■□□□□ 0.29
CMBL-206ENST00000511963 EIF4G3O43432 1585 aaKnown RBP16.85■□□□□ 0.29
CMBL-206ENST00000511963 SOGA1O94964 1423 aa16.85■□□□□ 0.29
CMBL-206ENST00000511963 AQRO60306 1485 aaKnown RBP eCLIP16.82■□□□□ 0.285e-8■■■□□ 19.1
CMBL-206ENST00000511963 CUX1P39880 1505 aa16.8■□□□□ 0.28
CMBL-206ENST00000511963 FGD5Q6ZNL6 1462 aa16.8■□□□□ 0.28
CMBL-206ENST00000511963 RAD54L2Q9Y4B4 1467 aa16.8■□□□□ 0.28
CMBL-206ENST00000511963 WDR97A6NE52 1622 aa16.79■□□□□ 0.28
CMBL-206ENST00000511963 TRIM41Q8WV44 630 aa16.78■□□□□ 0.28
CMBL-206ENST00000511963 TDRD9Q8NDG6 1382 aaKnown RBP16.75■□□□□ 0.27
CMBL-206ENST00000511963 FBLN2P98095 1184 aa16.7■□□□□ 0.26
CMBL-206ENST00000511963 CHD1O14646 1710 aa16.69■□□□□ 0.26
CMBL-206ENST00000511963 GRIN2BQ13224 1484 aa16.67■□□□□ 0.26
CMBL-206ENST00000511963 MAGI1Q96QZ7 1491 aaPredicted RBP16.67■□□□□ 0.26
CMBL-206ENST00000511963 RIMBP3CA6NJZ7 1639 aa16.67■□□□□ 0.26
CMBL-206ENST00000511963 RIMBP3BA6NNM3 1639 aa16.67■□□□□ 0.26
CMBL-206ENST00000511963 RIMBP3Q9UFD9 1639 aa16.67■□□□□ 0.26
CMBL-206ENST00000511963 SNAPC4Q5SXM2 1469 aa16.65■□□□□ 0.26
CMBL-206ENST00000511963 ABCA10Q8WWZ4 1543 aa16.65■□□□□ 0.26
CMBL-206ENST00000511963 CHMP7Q8WUX9 453 aaPredicted RBP16.64■□□□□ 0.25
CMBL-206ENST00000511963 ARHGEF11O15085 1522 aa16.64■□□□□ 0.25
CMBL-206ENST00000511963 GAPVD1Q14C86 1478 aa16.63■□□□□ 0.25
CMBL-206ENST00000511963 WRNQ14191 1432 aaPredicted RBP eCLIP16.62■□□□□ 0.25
CMBL-206ENST00000511963 TOP2BQ02880 1626 aa16.6■□□□□ 0.25
CMBL-206ENST00000511963 SYNJ2O15056 1496 aa16.6■□□□□ 0.25
CMBL-206ENST00000511963 BIVM-ERCC5R4GMW8 1640 aa16.59■□□□□ 0.25
CMBL-206ENST00000511963 PBRM1Q86U86 1689 aa16.57■□□□□ 0.24
CMBL-206ENST00000511963 ABCA5Q8WWZ7 1642 aa16.57■□□□□ 0.24
CMBL-206ENST00000511963 SYNJ1O43426 1573 aa16.56■□□□□ 0.24
CMBL-206ENST00000511963 CYB5RLQ6IPT4 315 aa16.53■□□□□ 0.24
CMBL-206ENST00000511963 CLASP1Q7Z460 1538 aa16.53■□□□□ 0.24
CMBL-206ENST00000511963 ARAP1Q96P48 1450 aa16.48■□□□□ 0.23
CMBL-206ENST00000511963 ERICH3Q5RHP9 1530 aa16.45■□□□□ 0.22
CMBL-206ENST00000511963 GRIN2AQ12879 1464 aa16.44■□□□□ 0.22
CMBL-206ENST00000511963 FHAD1B1AJZ9 1412 aa16.44■□□□□ 0.22
CMBL-206ENST00000511963 ADAMTS12P58397 1594 aa16.43■□□□□ 0.22
CMBL-206ENST00000511963 NUP160Q12769 1436 aa16.39■□□□□ 0.21
CMBL-206ENST00000511963 CEP170Q5SW79 1584 aa16.34■□□□□ 0.21
CMBL-206ENST00000511963 KIF27Q86VH2 1401 aa16.32■□□□□ 0.2
CMBL-206ENST00000511963 TRHP20396 242 aaPredicted RBP16.3■□□□□ 0.2
CMBL-206ENST00000511963 SHROOM2Q13796 1616 aa16.29■□□□□ 0.2
CMBL-206ENST00000511963 IGF1RP08069 1367 aa16.27■□□□□ 0.2
CMBL-206ENST00000511963 JPH4Q96JJ6 628 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms