RNA–Protein interactions for RNA: ENST00000511748.5

NR1I3-229, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-229ENST00000511748 AEBP2Q6ZN18 517 aaPredicted RBP26.68■■□□□ 1.86
NR1I3-229ENST00000511748 CHIC1Q5VXU3 224 aa25.99■■□□□ 1.75
NR1I3-229ENST00000511748 PHF23Q9BUL5 403 aaPredicted RBP22.97■■□□□ 1.27
NR1I3-229ENST00000511748 SENP3Q9H4L4 574 aaPredicted RBP22.44■■□□□ 1.18
NR1I3-229ENST00000511748 PLPPR3Q6T4P5 718 aa21.05■□□□□ 0.96
NR1I3-229ENST00000511748 FOXD1Q16676 465 aa20.94■□□□□ 0.94
NR1I3-229ENST00000511748 PPP6R1Q9UPN7 881 aa20.27■□□□□ 0.84
NR1I3-229ENST00000511748 ADRA2BP18089 450 aa20.21■□□□□ 0.83
NR1I3-229ENST00000511748 PIAS4Q8N2W9 510 aaPredicted RBP19.69■□□□□ 0.74
NR1I3-229ENST00000511748 MSH5O43196 834 aa19.14■□□□□ 0.65
NR1I3-229ENST00000511748 PPP4R3CPQ6ZMV5 832 aa18.62■□□□□ 0.57
NR1I3-229ENST00000511748 MAPK8IP2Q13387 824 aaPredicted RBP18.36■□□□□ 0.53
NR1I3-229ENST00000511748 KCNA4P22459 653 aa18.3■□□□□ 0.52
NR1I3-229ENST00000511748 SCAF1Q9H7N4 1312 aaKnown RBP18.27■□□□□ 0.52
NR1I3-229ENST00000511748 CNKSR2Q8WXI2 1034 aa18.03■□□□□ 0.48
NR1I3-229ENST00000511748 NCBP3Q53F19 620 aaKnown RBP18.02■□□□□ 0.48
NR1I3-229ENST00000511748 DMRT2Q9Y5R5 561 aa17.97■□□□□ 0.47
NR1I3-229ENST00000511748 NPM3O75607 178 aaKnown RBP17.91■□□□□ 0.46
NR1I3-229ENST00000511748 RNF216Q9NWF9 866 aaPredicted RBP17.67■□□□□ 0.42
NR1I3-229ENST00000511748 HOXD11P31277 338 aaPredicted RBP17.62■□□□□ 0.41
NR1I3-229ENST00000511748 POTEDQ86YR6 584 aa17.47■□□□□ 0.39
NR1I3-229ENST00000511748 SLC4A1APQ9BWU0 796 aaKnown RBP17.36■□□□□ 0.37
NR1I3-229ENST00000511748 DNAJC5BQ9UF47 199 aa17.31■□□□□ 0.36
NR1I3-229ENST00000511748 DCAF8L1A6NGE4 600 aa17.16■□□□□ 0.34
NR1I3-229ENST00000511748 NISCHQ9Y2I1 1504 aa16.98■□□□□ 0.31
NR1I3-229ENST00000511748 EHMT2Q96KQ7 1210 aa16.97■□□□□ 0.31
NR1I3-229ENST00000511748 SLC4A2P04920 1241 aa16.95■□□□□ 0.3
NR1I3-229ENST00000511748 ZBTB22O15209 634 aa16.91■□□□□ 0.3
NR1I3-229ENST00000511748 CSRNP3Q8WYN3 585 aa16.8■□□□□ 0.28
NR1I3-229ENST00000511748 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.75■□□□□ 0.27
NR1I3-229ENST00000511748 FOXD4L1Q9NU39 408 aa16.74■□□□□ 0.27
NR1I3-229ENST00000511748 U3KPZ7 1027 aaPredicted RBP16.57■□□□□ 0.24
NR1I3-229ENST00000511748 RNF39Q9H2S5 420 aa16.51■□□□□ 0.23
NR1I3-229ENST00000511748 MYCNP04198 464 aaPredicted RBP16.46■□□□□ 0.23
NR1I3-229ENST00000511748 C1QBPQ07021 282 aaKnown RBP16.23■□□□□ 0.19
NR1I3-229ENST00000511748 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.18■□□□□ 0.18
NR1I3-229ENST00000511748 HNRNPUL2Q1KMD3 747 aaKnown RBP16.18■□□□□ 0.18
NR1I3-229ENST00000511748 SAMD1Q6SPF0 538 aaPredicted RBP16.18■□□□□ 0.18
NR1I3-229ENST00000511748 ATF5Q9Y2D1 282 aaPredicted RBP16.18■□□□□ 0.18
NR1I3-229ENST00000511748 SPINK5Q9NQ38 1064 aaPredicted RBP16.13■□□□□ 0.17
NR1I3-229ENST00000511748 ATXN8OSP0DMR3 200 aa16.11■□□□□ 0.17
NR1I3-229ENST00000511748 CACNB1Q02641 598 aaPredicted RBP15.99■□□□□ 0.15
NR1I3-229ENST00000511748 CAPN15O75808 1086 aa15.96■□□□□ 0.15
NR1I3-229ENST00000511748 APLP2Q06481 763 aa15.96■□□□□ 0.15
NR1I3-229ENST00000511748 TRHP20396 242 aaPredicted RBP15.91■□□□□ 0.14
NR1I3-229ENST00000511748 ZNF219Q9P2Y4 722 aaPredicted RBP15.83■□□□□ 0.12
NR1I3-229ENST00000511748 DSG3P32926 999 aa15.74■□□□□ 0.11
NR1I3-229ENST00000511748 ABCB7O75027 752 aa15.72■□□□□ 0.11
NR1I3-229ENST00000511748 POLA2Q14181 598 aa15.68■□□□□ 0.1
NR1I3-229ENST00000511748 ABCC9O60706 1549 aa15.53■□□□□ 0.08
NR1I3-229ENST00000511748 MKRN4PQ13434 485 aaPredicted RBP15.46■□□□□ 0.07
NR1I3-229ENST00000511748 CCDC180Q9P1Z9 1646 aa15.43■□□□□ 0.06
NR1I3-229ENST00000511748 FBLN2P98095 1184 aa15.28■□□□□ 0.04
NR1I3-229ENST00000511748 ZBTB12Q9Y330 459 aaPredicted RBP15.28■□□□□ 0.04
NR1I3-229ENST00000511748 OSCARQ8IYS5 282 aa15.16■□□□□ 0.02
NR1I3-229ENST00000511748 FKBP8Q14318 412 aa15.12■□□□□ 0.01
NR1I3-229ENST00000511748 SPDYE4A6NLX3 237 aa15.02■□□□□ -0
NR1I3-229ENST00000511748 SPDYE2BA6NHP3 402 aa14.95□□□□□ -0.02
NR1I3-229ENST00000511748 SPDYE6P0CI01 402 aa14.95□□□□□ -0.02
NR1I3-229ENST00000511748 SPDYE2Q495Y8 402 aa14.95□□□□□ -0.02
NR1I3-229ENST00000511748 ZNF692Q9BU19 519 aaPredicted RBP14.92□□□□□ -0.02
NR1I3-229ENST00000511748 SSUH2Q9Y2M2 353 aa14.91□□□□□ -0.02
NR1I3-229ENST00000511748 RBM42Q9BTD8 480 aaKnown RBP14.85□□□□□ -0.03
NR1I3-229ENST00000511748 PROM2Q8N271 834 aa14.84□□□□□ -0.03
NR1I3-229ENST00000511748 RB1CC1Q8TDY2 1594 aa14.81□□□□□ -0.04
NR1I3-229ENST00000511748 PABPN1Q86U42 306 aaKnown RBP eCLIP14.76□□□□□ -0.05
NR1I3-229ENST00000511748 AKT1S1Q96B36 256 aa14.75□□□□□ -0.05
NR1I3-229ENST00000511748 NACADO15069 1562 aa14.66□□□□□ -0.06
NR1I3-229ENST00000511748 REM2Q8IYK8 340 aaPredicted RBP14.66□□□□□ -0.06
NR1I3-229ENST00000511748 PITPNM1O00562 1244 aa14.5□□□□□ -0.09
NR1I3-229ENST00000511748 SPDYE1Q8NFV5 336 aaPredicted RBP14.48□□□□□ -0.09
NR1I3-229ENST00000511748 CLEC11AQ9Y240 323 aa14.46□□□□□ -0.09
NR1I3-229ENST00000511748 FBXO3Q9UK99 471 aa14.44□□□□□ -0.1
NR1I3-229ENST00000511748 MYO15BQ96JP2 1530 aa14.44□□□□□ -0.1
NR1I3-229ENST00000511748 STAG3Q9UJ98 1225 aa14.42□□□□□ -0.1
NR1I3-229ENST00000511748 VASPP50552 380 aaPredicted RBP14.35□□□□□ -0.11
NR1I3-229ENST00000511748 UNC13AQ9UPW8 1703 aa14.35□□□□□ -0.11
NR1I3-229ENST00000511748 DCAF8L2P0C7V8 631 aa14.34□□□□□ -0.11
NR1I3-229ENST00000511748 PRR29P0C7W0 189 aa14.31□□□□□ -0.12
NR1I3-229ENST00000511748 CHRDL2Q6WN34 429 aa14.3□□□□□ -0.12
NR1I3-229ENST00000511748 SHROOM4Q9ULL8 1493 aa14.29□□□□□ -0.12
NR1I3-229ENST00000511748 BICRAQ9NZM4 1560 aa14.27□□□□□ -0.12
NR1I3-229ENST00000511748 CREBZFQ9NS37 354 aa14.24□□□□□ -0.13
NR1I3-229ENST00000511748 IFNLR1Q8IU57 520 aaPredicted RBP14.23□□□□□ -0.13
NR1I3-229ENST00000511748 MIER1Q8N108 512 aa14.23□□□□□ -0.13
NR1I3-229ENST00000511748 FXR2P51116 673 aaKnown RBP eCLIP14.21□□□□□ -0.13
NR1I3-229ENST00000511748 CHADLQ6NUI6 762 aa14.19□□□□□ -0.14
NR1I3-229ENST00000511748 PLCD3Q8N3E9 789 aa14.18□□□□□ -0.14
NR1I3-229ENST00000511748 PIP4P2Q8N4L2 257 aa14.17□□□□□ -0.14
NR1I3-229ENST00000511748 MNX1P50219 401 aaPredicted RBP14.12□□□□□ -0.15
NR1I3-229ENST00000511748 DCAF1Q9Y4B6 1507 aa14.11□□□□□ -0.15
NR1I3-229ENST00000511748 PRKAR2AP13861 404 aaKnown RBP14.11□□□□□ -0.15
NR1I3-229ENST00000511748 CECR2Q9BXF3 1484 aa14.09□□□□□ -0.15
NR1I3-229ENST00000511748 CC2D2AQ9P2K1 1620 aa14.07□□□□□ -0.16
NR1I3-229ENST00000511748 KLHL34Q8N239 644 aa14.04□□□□□ -0.16
NR1I3-229ENST00000511748 ZCCHC6Q5VYS8 1495 aaKnown RBP14.02□□□□□ -0.16
NR1I3-229ENST00000511748 PLEKHG5O94827 1062 aa14□□□□□ -0.17
NR1I3-229ENST00000511748 FARP1Q9Y4F1 1045 aaPredicted RBP14□□□□□ -0.17
NR1I3-229ENST00000511748 EIF4G1Q04637 1599 aaKnown RBP14□□□□□ -0.17
NR1I3-229ENST00000511748 SPOCK2Q92563 424 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms