RNA–Protein interactions for RNA: ENST00000511573.5

FAM13A-216, Transcript of family with sequence similarity 13 member A, humanhuman

TSL 2

Gene FAM13A, Length 3,442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM13A-216ENST00000511573 NISCHQ9Y2I1 1504 aa15.27■□□□□ 0.04
FAM13A-216ENST00000511573 HRCP23327 699 aa14.19□□□□□ -0.14
FAM13A-216ENST00000511573 PELP1Q8IZL8 1130 aaKnown RBP14.12□□□□□ -0.15
FAM13A-216ENST00000511573 PPARGC1BQ86YN6 1023 aaKnown RBP14.09□□□□□ -0.15
FAM13A-216ENST00000511573 PCGF6Q9BYE7 350 aa13.92□□□□□ -0.18
FAM13A-216ENST00000511573 SCAF1Q9H7N4 1312 aaKnown RBP13.69□□□□□ -0.22
FAM13A-216ENST00000511573 MYT1Q01538 1121 aa13.62□□□□□ -0.23
FAM13A-216ENST00000511573 SUPT5HO00267 1087 aaKnown RBP13.6□□□□□ -0.23
FAM13A-216ENST00000511573 SHROOM4Q9ULL8 1493 aa13.48□□□□□ -0.25
FAM13A-216ENST00000511573 MYO15BQ96JP2 1530 aa13.39□□□□□ -0.27
FAM13A-216ENST00000511573 CHIC1Q5VXU3 224 aa13.27□□□□□ -0.28
FAM13A-216ENST00000511573 NEUROD1Q13562 356 aa13.22□□□□□ -0.29
FAM13A-216ENST00000511573 GTF3C3Q9Y5Q9 886 aa13.22□□□□□ -0.29
FAM13A-216ENST00000511573 ACIN1Q9UKV3 1341 aaKnown RBP13.2□□□□□ -0.3
FAM13A-216ENST00000511573 TRIM26Q12899 539 aaPredicted RBP13.19□□□□□ -0.3
FAM13A-216ENST00000511573 LOC105371045A0A1W2PR82 267 aa13.19□□□□□ -0.3
FAM13A-216ENST00000511573 ZEB1P37275 1124 aaPredicted RBP13.13□□□□□ -0.31
FAM13A-216ENST00000511573 DCAF1Q9Y4B6 1507 aa13.03□□□□□ -0.32
FAM13A-216ENST00000511573 CENPBP07199 599 aaPredicted RBP13.02□□□□□ -0.32
FAM13A-216ENST00000511573 ZCCHC6Q5VYS8 1495 aaKnown RBP12.93□□□□□ -0.34
FAM13A-216ENST00000511573 BCL11AQ9H165 835 aa12.91□□□□□ -0.34
FAM13A-216ENST00000511573 CCDC180Q9P1Z9 1646 aa12.9□□□□□ -0.34
FAM13A-216ENST00000511573 YTHDC1Q96MU7 727 aaKnown RBP12.9□□□□□ -0.35
FAM13A-216ENST00000511573 DIEXFQ68CQ4 756 aaKnown RBP12.85□□□□□ -0.35
FAM13A-216ENST00000511573 FAM9AQ8IZU1 332 aaPredicted RBP12.83□□□□□ -0.36
FAM13A-216ENST00000511573 DCAF8L2P0C7V8 631 aa12.81□□□□□ -0.36
FAM13A-216ENST00000511573 EHMT2Q96KQ7 1210 aa12.79□□□□□ -0.36
FAM13A-216ENST00000511573 TTBK1Q5TCY1 1321 aaPredicted RBP12.78□□□□□ -0.36
FAM13A-216ENST00000511573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.78□□□□□ -0.36
FAM13A-216ENST00000511573 CCER1Q8TC90 406 aaPredicted RBP12.75□□□□□ -0.37
FAM13A-216ENST00000511573 ANP32EQ9BTT0 268 aa12.64□□□□□ -0.39
FAM13A-216ENST00000511573 PRKCSHP14314 528 aaPredicted RBP12.63□□□□□ -0.39
FAM13A-216ENST00000511573 CSRNP3Q8WYN3 585 aa12.6□□□□□ -0.39
FAM13A-216ENST00000511573 MIER1Q8N108 512 aa12.5□□□□□ -0.41
FAM13A-216ENST00000511573 TRIM41Q8WV44 630 aa12.46□□□□□ -0.41
FAM13A-216ENST00000511573 TSHZ2Q9NRE2 1034 aa12.46□□□□□ -0.42
FAM13A-216ENST00000511573 ZNF316A6NFI3 1004 aaPredicted RBP12.45□□□□□ -0.42
FAM13A-216ENST00000511573 SUPT16HQ9Y5B9 1047 aaKnown RBP12.41□□□□□ -0.42
FAM13A-216ENST00000511573 BCANQ96GW7 911 aa12.34□□□□□ -0.43
FAM13A-216ENST00000511573 ABCC9O60706 1549 aa12.3□□□□□ -0.44
FAM13A-216ENST00000511573 ERICH6Q7L0X2 663 aa12.24□□□□□ -0.45
FAM13A-216ENST00000511573 ANO8Q9HCE9 1232 aaPredicted RBP12.15□□□□□ -0.46
FAM13A-216ENST00000511573 RBM19Q9Y4C8 960 aaKnown RBP12.15□□□□□ -0.46
FAM13A-216ENST00000511573 RSF1Q96T23 1441 aaPredicted RBP12.14□□□□□ -0.47
FAM13A-216ENST00000511573 CLSPNQ9HAW4 1339 aa12.14□□□□□ -0.47
FAM13A-216ENST00000511573 SCRIBQ14160 1630 aa12.13□□□□□ -0.47
FAM13A-216ENST00000511573 FKBP8Q14318 412 aa12.11□□□□□ -0.47
FAM13A-216ENST00000511573 ITGAEP38570 1179 aa12.11□□□□□ -0.47
FAM13A-216ENST00000511573 HNRNPUL2Q1KMD3 747 aaKnown RBP12.09□□□□□ -0.47
FAM13A-216ENST00000511573 MSH5O43196 834 aa12.07□□□□□ -0.48
FAM13A-216ENST00000511573 CCDC136Q96JN2 1154 aa12.02□□□□□ -0.49
FAM13A-216ENST00000511573 APLP2Q06481 763 aa12.01□□□□□ -0.49
FAM13A-216ENST00000511573 KCNH8Q96L42 1107 aa12.01□□□□□ -0.49
FAM13A-216ENST00000511573 RB1CC1Q8TDY2 1594 aa12.01□□□□□ -0.49
FAM13A-216ENST00000511573 DEKP35659 375 aaKnown RBP12□□□□□ -0.49
FAM13A-216ENST00000511573 NEFLP07196 543 aa11.98□□□□□ -0.49
FAM13A-216ENST00000511573 SALL2Q9Y467 1007 aaPredicted RBP11.98□□□□□ -0.49
FAM13A-216ENST00000511573 NACADO15069 1562 aa11.93□□□□□ -0.5
FAM13A-216ENST00000511573 CECR2Q9BXF3 1484 aa11.91□□□□□ -0.5
FAM13A-216ENST00000511573 NBR1Q14596 966 aa11.91□□□□□ -0.5
FAM13A-216ENST00000511573 RTN4Q9NQC3 1192 aaKnown RBP11.9□□□□□ -0.5
FAM13A-216ENST00000511573 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.9□□□□□ -0.5
FAM13A-216ENST00000511573 MROH2BQ7Z745 1585 aa11.88□□□□□ -0.51
FAM13A-216ENST00000511573 TRIM52Q96A61 297 aa11.85□□□□□ -0.51
FAM13A-216ENST00000511573 IRX6P78412 446 aaPredicted RBP11.83□□□□□ -0.52
FAM13A-216ENST00000511573 UBTFP17480 764 aaKnown RBP11.82□□□□□ -0.52
FAM13A-216ENST00000511573 CDK11AQ9UQ88 783 aaPredicted RBP11.82□□□□□ -0.52
FAM13A-216ENST00000511573 WIZO95785 1651 aa11.81□□□□□ -0.52
FAM13A-216ENST00000511573 PABPN1Q86U42 306 aaKnown RBP eCLIP11.81□□□□□ -0.52
FAM13A-216ENST00000511573 FANCIQ9NVI1 1328 aa11.79□□□□□ -0.52
FAM13A-216ENST00000511573 MYT1LQ9UL68 1186 aa11.79□□□□□ -0.52
FAM13A-216ENST00000511573 IL27Q8NEV9 243 aa11.79□□□□□ -0.52
FAM13A-216ENST00000511573 CEP162Q5TB80 1403 aa11.76□□□□□ -0.53
FAM13A-216ENST00000511573 DDX10Q13206 875 aaKnown RBP11.74□□□□□ -0.53
FAM13A-216ENST00000511573 BAZ1AQ9NRL2 1556 aaPredicted RBP11.73□□□□□ -0.53
FAM13A-216ENST00000511573 EIF5BO60841 1220 aaKnown RBP11.73□□□□□ -0.53
FAM13A-216ENST00000511573 WRNQ14191 1432 aaPredicted RBP eCLIP11.72□□□□□ -0.53
FAM13A-216ENST00000511573 RANGAP1P46060 587 aaPredicted RBP11.72□□□□□ -0.53
FAM13A-216ENST00000511573 UBE2Q2Q8WVN8 375 aa11.71□□□□□ -0.53
FAM13A-216ENST00000511573 EIF4G1Q04637 1599 aaKnown RBP11.69□□□□□ -0.54
FAM13A-216ENST00000511573 RTL5Q5HYW3 569 aaPredicted RBP11.69□□□□□ -0.54
FAM13A-216ENST00000511573 ERICH6BQ5W0A0 696 aa11.69□□□□□ -0.54
FAM13A-216ENST00000511573 UNC13AQ9UPW8 1703 aa11.69□□□□□ -0.54
FAM13A-216ENST00000511573 PAK3O75914 559 aaPredicted RBP11.69□□□□□ -0.54
FAM13A-216ENST00000511573 NOP58Q9Y2X3 529 aaKnown RBP11.67□□□□□ -0.54
FAM13A-216ENST00000511573 HIRIP3Q9BW71 556 aaPredicted RBP11.65□□□□□ -0.54
FAM13A-216ENST00000511573 TOP2AP11388 1531 aaKnown RBP11.62□□□□□ -0.55
FAM13A-216ENST00000511573 CCDC88BA6NC98 1476 aa11.6□□□□□ -0.55
FAM13A-216ENST00000511573 SMARCA4P51532 1647 aa11.59□□□□□ -0.55
FAM13A-216ENST00000511573 DHX57Q6P158 1386 aaKnown RBP11.59□□□□□ -0.55
FAM13A-216ENST00000511573 BICRAQ9NZM4 1560 aa11.59□□□□□ -0.55
FAM13A-216ENST00000511573 B4GALNT3Q6L9W6 998 aa11.59□□□□□ -0.55
FAM13A-216ENST00000511573 ABCC8Q09428 1581 aa11.58□□□□□ -0.56
FAM13A-216ENST00000511573 TNIKQ9UKE5 1360 aa11.57□□□□□ -0.56
FAM13A-216ENST00000511573 HNRNPUQ00839 825 aaKnown RBP eCLIP11.57□□□□□ -0.56
FAM13A-216ENST00000511573 SMARCA2P51531 1590 aa11.57□□□□□ -0.56
FAM13A-216ENST00000511573 ANP32CO43423 234 aa11.56□□□□□ -0.56
FAM13A-216ENST00000511573 SOGA1O94964 1423 aa11.53□□□□□ -0.56
FAM13A-216ENST00000511573 PKNOX2Q96KN3 472 aa11.53□□□□□ -0.56
FAM13A-216ENST00000511573 ZBTB47Q9UFB7 747 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms