RNA–Protein interactions for RNA: ENST00000511338.1

SEC31A-232, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 5

Gene SEC31A, Length 657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-232ENST00000511338 AEBP2Q6ZN18 517 aaPredicted RBP18.75■□□□□ 0.59
SEC31A-232ENST00000511338 CHIC1Q5VXU3 224 aa17.62■□□□□ 0.41
SEC31A-232ENST00000511338 SENP3Q9H4L4 574 aaPredicted RBP16.03■□□□□ 0.16
SEC31A-232ENST00000511338 PHF23Q9BUL5 403 aaPredicted RBP15.75■□□□□ 0.11
SEC31A-232ENST00000511338 POTEDQ86YR6 584 aa15.74■□□□□ 0.11
SEC31A-232ENST00000511338 FOXD1Q16676 465 aa14.96□□□□□ -0.01
SEC31A-232ENST00000511338 MSH5O43196 834 aa14.19□□□□□ -0.14
SEC31A-232ENST00000511338 PLPPR3Q6T4P5 718 aa13.96□□□□□ -0.17
SEC31A-232ENST00000511338 PIAS4Q8N2W9 510 aaPredicted RBP13.88□□□□□ -0.19
SEC31A-232ENST00000511338 PPP6R1Q9UPN7 881 aa13.79□□□□□ -0.2
SEC31A-232ENST00000511338 ADRA2BP18089 450 aa13.7□□□□□ -0.22
SEC31A-232ENST00000511338 CACNB1Q02641 598 aaPredicted RBP12.83□□□□□ -0.36
SEC31A-232ENST00000511338 DMRT2Q9Y5R5 561 aa12.7□□□□□ -0.38
SEC31A-232ENST00000511338 MAPK8IP2Q13387 824 aaPredicted RBP12.63□□□□□ -0.39
SEC31A-232ENST00000511338 SCAF1Q9H7N4 1312 aaKnown RBP12.57□□□□□ -0.4
SEC31A-232ENST00000511338 HOXD11P31277 338 aaPredicted RBP12.18□□□□□ -0.46
SEC31A-232ENST00000511338 PPP4R3CPQ6ZMV5 832 aa12.18□□□□□ -0.46
SEC31A-232ENST00000511338 POTEHQ6S545 545 aa12.11□□□□□ -0.47
SEC31A-232ENST00000511338 CNKSR2Q8WXI2 1034 aa12.04□□□□□ -0.48
SEC31A-232ENST00000511338 RNF39Q9H2S5 420 aa12.02□□□□□ -0.49
SEC31A-232ENST00000511338 RNF216Q9NWF9 866 aaPredicted RBP12.01□□□□□ -0.49
SEC31A-232ENST00000511338 DCAF8L1A6NGE4 600 aa12□□□□□ -0.49
SEC31A-232ENST00000511338 DNAJC5BQ9UF47 199 aa11.89□□□□□ -0.51
SEC31A-232ENST00000511338 C1QBPQ07021 282 aaKnown RBP11.83□□□□□ -0.52
SEC31A-232ENST00000511338 EHMT2Q96KQ7 1210 aa11.77□□□□□ -0.53
SEC31A-232ENST00000511338 KCNA4P22459 653 aa11.72□□□□□ -0.53
SEC31A-232ENST00000511338 NCBP3Q53F19 620 aaKnown RBP11.64□□□□□ -0.55
SEC31A-232ENST00000511338 NPM3O75607 178 aaKnown RBP11.5□□□□□ -0.57
SEC31A-232ENST00000511338 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.46□□□□□ -0.577e-14■□□□□ 10.2
SEC31A-232ENST00000511338 U3KPZ7 1027 aaPredicted RBP11.29□□□□□ -0.6
SEC31A-232ENST00000511338 CSRNP3Q8WYN3 585 aa11.28□□□□□ -0.6
SEC31A-232ENST00000511338 SLC4A1APQ9BWU0 796 aaKnown RBP11.28□□□□□ -0.6
SEC31A-232ENST00000511338 DSG3P32926 999 aa11.17□□□□□ -0.62
SEC31A-232ENST00000511338 SPINK5Q9NQ38 1064 aaPredicted RBP11.14□□□□□ -0.63
SEC31A-232ENST00000511338 CAPN15O75808 1086 aa11.08□□□□□ -0.64
SEC31A-232ENST00000511338 SLC4A2P04920 1241 aa11.05□□□□□ -0.64
SEC31A-232ENST00000511338 APLP2Q06481 763 aa10.94□□□□□ -0.66
SEC31A-232ENST00000511338 ZNF219Q9P2Y4 722 aaPredicted RBP10.92□□□□□ -0.66
SEC31A-232ENST00000511338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.89□□□□□ -0.67
SEC31A-232ENST00000511338 HNRNPUL2Q1KMD3 747 aaKnown RBP10.89□□□□□ -0.67
SEC31A-232ENST00000511338 TRHP20396 242 aaPredicted RBP10.84□□□□□ -0.67
SEC31A-232ENST00000511338 SP7Q8TDD2 431 aaPredicted RBP10.83□□□□□ -0.68
SEC31A-232ENST00000511338 SAMD1Q6SPF0 538 aaPredicted RBP10.81□□□□□ -0.68
SEC31A-232ENST00000511338 ABCB7O75027 752 aa10.8□□□□□ -0.68
SEC31A-232ENST00000511338 ZBTB22O15209 634 aa10.79□□□□□ -0.68
SEC31A-232ENST00000511338 MYCNP04198 464 aaPredicted RBP10.66□□□□□ -0.7
SEC31A-232ENST00000511338 RBM42Q9BTD8 480 aaKnown RBP10.66□□□□□ -0.7
SEC31A-232ENST00000511338 CHRDL2Q6WN34 429 aa10.59□□□□□ -0.71
SEC31A-232ENST00000511338 SLC24A1O60721 1099 aa10.57□□□□□ -0.72
SEC31A-232ENST00000511338 FOXD4L1Q9NU39 408 aa10.57□□□□□ -0.72
SEC31A-232ENST00000511338 POLA2Q14181 598 aa10.55□□□□□ -0.72
SEC31A-232ENST00000511338 AMER1Q5JTC6 1135 aaPredicted RBP10.47□□□□□ -0.73
SEC31A-232ENST00000511338 RTN4Q9NQC3 1192 aaKnown RBP10.47□□□□□ -0.73
SEC31A-232ENST00000511338 PLSCR2Q9NRY7 297 aa10.4□□□□□ -0.74
SEC31A-232ENST00000511338 ATF5Q9Y2D1 282 aaPredicted RBP10.39□□□□□ -0.75
SEC31A-232ENST00000511338 ZBTB12Q9Y330 459 aaPredicted RBP10.38□□□□□ -0.75
SEC31A-232ENST00000511338 AKT1S1Q96B36 256 aa10.37□□□□□ -0.75
SEC31A-232ENST00000511338 REM2Q8IYK8 340 aaPredicted RBP10.24□□□□□ -0.77
SEC31A-232ENST00000511338 OSCARQ8IYS5 282 aa10.23□□□□□ -0.77
SEC31A-232ENST00000511338 HAX1O00165 279 aa10.21□□□□□ -0.77
SEC31A-232ENST00000511338 PIP4P2Q8N4L2 257 aa10.2□□□□□ -0.78
SEC31A-232ENST00000511338 FKBP8Q14318 412 aa10.18□□□□□ -0.78
SEC31A-232ENST00000511338 ATXN8OSP0DMR3 200 aa10.17□□□□□ -0.78
SEC31A-232ENST00000511338 PITPNM1O00562 1244 aa10.15□□□□□ -0.78
SEC31A-232ENST00000511338 FXR2P51116 673 aaKnown RBP eCLIP10.15□□□□□ -0.782e-8■■□□□ 12.7
SEC31A-232ENST00000511338 LHX8Q68G74 356 aa10.14□□□□□ -0.79
SEC31A-232ENST00000511338 SPDYE2BA6NHP3 402 aa10.04□□□□□ -0.8
SEC31A-232ENST00000511338 SPDYE6P0CI01 402 aa10.04□□□□□ -0.8
SEC31A-232ENST00000511338 SPDYE2Q495Y8 402 aa10.04□□□□□ -0.8
SEC31A-232ENST00000511338 EVX2Q03828 476 aa10□□□□□ -0.81
SEC31A-232ENST00000511338 FBLN2P98095 1184 aa9.98□□□□□ -0.81
SEC31A-232ENST00000511338 MKRN4PQ13434 485 aaPredicted RBP9.93□□□□□ -0.82
SEC31A-232ENST00000511338 SSUH2Q9Y2M2 353 aa9.92□□□□□ -0.82
SEC31A-232ENST00000511338 SPDYE1Q8NFV5 336 aaPredicted RBP9.89□□□□□ -0.83
SEC31A-232ENST00000511338 PRKAR2AP13861 404 aaKnown RBP9.85□□□□□ -0.83
SEC31A-232ENST00000511338 C19orf67A6NJJ6 358 aa9.82□□□□□ -0.84
SEC31A-232ENST00000511338 ZNF692Q9BU19 519 aaPredicted RBP9.81□□□□□ -0.84
SEC31A-232ENST00000511338 CLEC11AQ9Y240 323 aa9.79□□□□□ -0.84
SEC31A-232ENST00000511338 GABBR2O75899 941 aa9.73□□□□□ -0.85
SEC31A-232ENST00000511338 PABPN1Q86U42 306 aaKnown RBP eCLIP9.67□□□□□ -0.86
SEC31A-232ENST00000511338 CHADLQ6NUI6 762 aa9.65□□□□□ -0.86
SEC31A-232ENST00000511338 PRR29P0C7W0 189 aa9.64□□□□□ -0.87
SEC31A-232ENST00000511338 PLCB2Q00722 1185 aa9.63□□□□□ -0.87
SEC31A-232ENST00000511338 FBXO3Q9UK99 471 aa9.62□□□□□ -0.87
SEC31A-232ENST00000511338 POTEMA6NI47 508 aa9.6□□□□□ -0.87
SEC31A-232ENST00000511338 PCDH10Q9P2E7 1040 aa9.59□□□□□ -0.87
SEC31A-232ENST00000511338 CLCN6P51797 869 aa9.55□□□□□ -0.88
SEC31A-232ENST00000511338 FARP1Q9Y4F1 1045 aaPredicted RBP9.54□□□□□ -0.88
SEC31A-232ENST00000511338 CD44P16070 742 aaKnown RBP9.52□□□□□ -0.89
SEC31A-232ENST00000511338 POTEGQ6S5H5 508 aa9.52□□□□□ -0.89
SEC31A-232ENST00000511338 SPDYE4A6NLX3 237 aa9.51□□□□□ -0.89
SEC31A-232ENST00000511338 HAP1P54257 671 aaPredicted RBP9.51□□□□□ -0.89
SEC31A-232ENST00000511338 POTEIP0CG38 1075 aa9.5□□□□□ -0.89
SEC31A-232ENST00000511338 DCAF8L2P0C7V8 631 aa9.47□□□□□ -0.89
SEC31A-232ENST00000511338 VASPP50552 380 aaPredicted RBP9.47□□□□□ -0.89
SEC31A-232ENST00000511338 ZNF579Q8NAF0 562 aaKnown RBP9.44□□□□□ -0.9
SEC31A-232ENST00000511338 BCANQ96GW7 911 aa9.44□□□□□ -0.9
SEC31A-232ENST00000511338 PROM2Q8N271 834 aa9.43□□□□□ -0.9
SEC31A-232ENST00000511338 CREBZFQ9NS37 354 aa9.41□□□□□ -0.9
SEC31A-232ENST00000511338 STAG3Q9UJ98 1225 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms