RNA–Protein interactions for RNA: ENST00000511309.5

PRELID1-208, Transcript of PRELI domain containing 1, humanhuman

TSL 2

Gene PRELID1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRELID1-208ENST00000511309 NISCHQ9Y2I1 1504 aa53.56■■■■■ 6.16
PRELID1-208ENST00000511309 ABCC9O60706 1549 aa47.92■■■■■ 5.26
PRELID1-208ENST00000511309 CCDC180Q9P1Z9 1646 aa47.78■■■■■ 5.24
PRELID1-208ENST00000511309 RB1CC1Q8TDY2 1594 aa45.55■■■■■ 4.88
PRELID1-208ENST00000511309 NACADO15069 1562 aa45.21■■■■■ 4.83
PRELID1-208ENST00000511309 DNAJC5BQ9UF47 199 aa45.07■■■■■ 4.81
PRELID1-208ENST00000511309 DCAF8L2P0C7V8 631 aa44.95■■■■■ 4.79
PRELID1-208ENST00000511309 ZCCHC6Q5VYS8 1495 aaKnown RBP44.63■■■■■ 4.73
PRELID1-208ENST00000511309 PABPN1Q86U42 306 aaKnown RBP eCLIP44.6■■■■■ 4.73
PRELID1-208ENST00000511309 MYO15BQ96JP2 1530 aa44.55■■■■■ 4.72
PRELID1-208ENST00000511309 UNC13AQ9UPW8 1703 aa44.51■■■■■ 4.72
PRELID1-208ENST00000511309 BICRAQ9NZM4 1560 aa44.24■■■■■ 4.67
PRELID1-208ENST00000511309 DCAF1Q9Y4B6 1507 aa44.24■■■■■ 4.67
PRELID1-208ENST00000511309 SHROOM4Q9ULL8 1493 aa43.63■■■■■ 4.57
PRELID1-208ENST00000511309 SCRIBQ14160 1630 aa43.55■■■■■ 4.56
PRELID1-208ENST00000511309 CC2D2AQ9P2K1 1620 aa43.28■■■■■ 4.52
PRELID1-208ENST00000511309 CECR2Q9BXF3 1484 aa43.19■■■■■ 4.5
PRELID1-208ENST00000511309 EIF4G1Q04637 1599 aaKnown RBP43.16■■■■■ 4.5
PRELID1-208ENST00000511309 NCAPD3P42695 1498 aa41.74■■■■■ 4.27
PRELID1-208ENST00000511309 ATAD2BQ9ULI0 1458 aa41.6■■■■■ 4.25
PRELID1-208ENST00000511309 SMARCA4P51532 1647 aa41.55■■■■■ 4.24
PRELID1-208ENST00000511309 BAZ1AQ9NRL2 1556 aaPredicted RBP41.5■■■■■ 4.23
PRELID1-208ENST00000511309 SMARCA2P51531 1590 aa41.47■■■■■ 4.23
PRELID1-208ENST00000511309 DNAJC5Q9H3Z4 198 aa41.47■■■■■ 4.23
PRELID1-208ENST00000511309 HMGXB3Q12766 1538 aa41.43■■■■■ 4.22
PRELID1-208ENST00000511309 ERCC6Q03468 1493 aa41.39■■■■■ 4.22
PRELID1-208ENST00000511309 CUX2O14529 1486 aa41.35■■■■■ 4.21
PRELID1-208ENST00000511309 MROH2BQ7Z745 1585 aa41.32■■■■■ 4.2
PRELID1-208ENST00000511309 BAZ1BQ9UIG0 1483 aaKnown RBP41.19■■■■■ 4.18
PRELID1-208ENST00000511309 NESP48681 1621 aa41.14■■■■■ 4.18
PRELID1-208ENST00000511309 PEG3Q9GZU2 1588 aa41.12■■■■■ 4.17
PRELID1-208ENST00000511309 WIZO95785 1651 aa40.92■■■■■ 4.14
PRELID1-208ENST00000511309 RSF1Q96T23 1441 aaPredicted RBP40.88■■■■■ 4.13
PRELID1-208ENST00000511309 LAMC3Q9Y6N6 1575 aa40.82■■■■■ 4.12
PRELID1-208ENST00000511309 THOC2Q8NI27 1593 aaKnown RBP40.74■■■■■ 4.11
PRELID1-208ENST00000511309 KIF21AQ7Z4S6 1674 aa40.59■■■■■ 4.09
PRELID1-208ENST00000511309 PDS5BQ9NTI5 1447 aa40.59■■■■■ 4.09
PRELID1-208ENST00000511309 CADPSQ9ULU8 1353 aa40.48■■■■■ 4.07
PRELID1-208ENST00000511309 TOP2AP11388 1531 aaKnown RBP40.43■■■■■ 4.06
PRELID1-208ENST00000511309 MRC2Q9UBG0 1479 aa40.26■■■■■ 4.03
PRELID1-208ENST00000511309 WDR62O43379 1518 aa40.16■■■■■ 4.02
PRELID1-208ENST00000511309 SUPT5HO00267 1087 aaKnown RBP40.13■■■■■ 4.01
PRELID1-208ENST00000511309 CEP164Q9UPV0 1460 aa40.07■■■■■ 4
PRELID1-208ENST00000511309 FANCD2Q9BXW9 1451 aa40.01■■■■■ 4
PRELID1-208ENST00000511309 CFTRP13569 1480 aa39.99■■■■□ 3.99
PRELID1-208ENST00000511309 CCDC88BA6NC98 1476 aa39.98■■■■□ 3.99
PRELID1-208ENST00000511309 URB2Q14146 1524 aaKnown RBP39.7■■■■□ 3.95
PRELID1-208ENST00000511309 TRIM41Q8WV44 630 aa39.6■■■■□ 3.93
PRELID1-208ENST00000511309 PRDM2Q13029 1718 aa39.57■■■■□ 3.92
PRELID1-208ENST00000511309 OSCARQ8IYS5 282 aa39.44■■■■□ 3.9
PRELID1-208ENST00000511309 IFT140Q96RY7 1462 aa39.27■■■■□ 3.88
PRELID1-208ENST00000511309 TOPBP1Q92547 1522 aa39.24■■■■□ 3.87
PRELID1-208ENST00000511309 ZNF608Q9ULD9 1512 aaPredicted RBP39.24■■■■□ 3.87
PRELID1-208ENST00000511309 ABCC8Q09428 1581 aa39.13■■■■□ 3.85
PRELID1-208ENST00000511309 DNMBPQ6XZF7 1577 aa39.09■■■■□ 3.85
PRELID1-208ENST00000511309 EIF4G3O43432 1585 aaKnown RBP39■■■■□ 3.83
PRELID1-208ENST00000511309 RIMBP3CA6NJZ7 1639 aa38.95■■■■□ 3.83
PRELID1-208ENST00000511309 RIMBP3BA6NNM3 1639 aa38.95■■■■□ 3.83
PRELID1-208ENST00000511309 RIMBP3Q9UFD9 1639 aa38.95■■■■□ 3.83
PRELID1-208ENST00000511309 TARBP1Q13395 1621 aaKnown RBP38.9■■■■□ 3.82
PRELID1-208ENST00000511309 AQRO60306 1485 aaKnown RBP eCLIP38.86■■■■□ 3.814e-8■■■■□ 24.2
PRELID1-208ENST00000511309 POLA1P09884 1462 aaPredicted RBP38.84■■■■□ 3.81
PRELID1-208ENST00000511309 ARHGEF11O15085 1522 aa38.82■■■■□ 3.8
PRELID1-208ENST00000511309 CUX1P39880 1505 aa38.74■■■■□ 3.79
PRELID1-208ENST00000511309 CHD1O14646 1710 aa38.73■■■■□ 3.79
PRELID1-208ENST00000511309 RAD54L2Q9Y4B4 1467 aa38.7■■■■□ 3.79
PRELID1-208ENST00000511309 SOGA1O94964 1423 aa38.65■■■■□ 3.78
PRELID1-208ENST00000511309 FBLN2P98095 1184 aa38.62■■■■□ 3.77
PRELID1-208ENST00000511309 TDRD9Q8NDG6 1382 aaKnown RBP38.6■■■■□ 3.77
PRELID1-208ENST00000511309 FGD5Q6ZNL6 1462 aa38.6■■■■□ 3.77
PRELID1-208ENST00000511309 WRNQ14191 1432 aaPredicted RBP eCLIP38.55■■■■□ 3.76
PRELID1-208ENST00000511309 CYB5RLQ6IPT4 315 aa38.53■■■■□ 3.76
PRELID1-208ENST00000511309 WDR97A6NE52 1622 aa38.49■■■■□ 3.75
PRELID1-208ENST00000511309 SYNJ1O43426 1573 aa38.48■■■■□ 3.75
PRELID1-208ENST00000511309 SNAPC4Q5SXM2 1469 aa38.46■■■■□ 3.75
PRELID1-208ENST00000511309 TOP2BQ02880 1626 aa38.45■■■■□ 3.75
PRELID1-208ENST00000511309 BIVM-ERCC5R4GMW8 1640 aa38.45■■■■□ 3.75
PRELID1-208ENST00000511309 ARAP1Q96P48 1450 aa38.43■■■■□ 3.74
PRELID1-208ENST00000511309 MAGI1Q96QZ7 1491 aaPredicted RBP38.35■■■■□ 3.73
PRELID1-208ENST00000511309 GRIN2BQ13224 1484 aa38.34■■■■□ 3.73
PRELID1-208ENST00000511309 CHMP7Q8WUX9 453 aaPredicted RBP38.31■■■■□ 3.72
PRELID1-208ENST00000511309 CLASP1Q7Z460 1538 aa38.29■■■■□ 3.72
PRELID1-208ENST00000511309 SYNJ2O15056 1496 aa38.22■■■■□ 3.71
PRELID1-208ENST00000511309 GAPVD1Q14C86 1478 aa38.18■■■■□ 3.7
PRELID1-208ENST00000511309 ABCA10Q8WWZ4 1543 aa38.17■■■■□ 3.7
PRELID1-208ENST00000511309 PBRM1Q86U86 1689 aa38.17■■■■□ 3.7
PRELID1-208ENST00000511309 TRHP20396 242 aaPredicted RBP38.14■■■■□ 3.7
PRELID1-208ENST00000511309 ABCA5Q8WWZ7 1642 aa38.09■■■■□ 3.69
PRELID1-208ENST00000511309 GRIN2AQ12879 1464 aa37.84■■■■□ 3.65
PRELID1-208ENST00000511309 ADAMTS12P58397 1594 aa37.8■■■■□ 3.64
PRELID1-208ENST00000511309 KIF27Q86VH2 1401 aa37.73■■■■□ 3.63
PRELID1-208ENST00000511309 ERICH3Q5RHP9 1530 aa37.72■■■■□ 3.63
PRELID1-208ENST00000511309 NUP160Q12769 1436 aa37.72■■■■□ 3.63
PRELID1-208ENST00000511309 CEP170Q5SW79 1584 aa37.72■■■■□ 3.63
PRELID1-208ENST00000511309 FHAD1B1AJZ9 1412 aa37.7■■■■□ 3.62
PRELID1-208ENST00000511309 ERCC6L2Q5T890 1561 aa37.69■■■■□ 3.62
PRELID1-208ENST00000511309 SHROOM2Q13796 1616 aa37.57■■■■□ 3.6
PRELID1-208ENST00000511309 IGF1RP08069 1367 aa37.55■■■■□ 3.6
PRELID1-208ENST00000511309 RUSC2Q8N2Y8 1516 aa37.51■■■■□ 3.59
PRELID1-208ENST00000511309 CHIC1Q5VXU3 224 aa37.47■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms