RNA–Protein interactions for RNA: ENST00000509530.1

AC008406.1-201, humanhuman

TSL 3 BASIC

Gene AC008406.1, Length 541 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008406.1-201ENST00000509530 NISCHQ9Y2I1 1504 aa35.35■■■■□ 3.25
AC008406.1-201ENST00000509530 CCDC180Q9P1Z9 1646 aa31.47■■■□□ 2.63
AC008406.1-201ENST00000509530 ABCC9O60706 1549 aa30.56■■■□□ 2.48
AC008406.1-201ENST00000509530 NACADO15069 1562 aa29.58■■■□□ 2.33
AC008406.1-201ENST00000509530 RB1CC1Q8TDY2 1594 aa29.56■■■□□ 2.32
AC008406.1-201ENST00000509530 MYO15BQ96JP2 1530 aa29.55■■■□□ 2.32
AC008406.1-201ENST00000509530 ZCCHC6Q5VYS8 1495 aaKnown RBP29.47■■■□□ 2.31
AC008406.1-201ENST00000509530 DCAF1Q9Y4B6 1507 aa29.39■■■□□ 2.3
AC008406.1-201ENST00000509530 DCAF8L2P0C7V8 631 aa29.23■■■□□ 2.27
AC008406.1-201ENST00000509530 UNC13AQ9UPW8 1703 aa28.82■■■□□ 2.2
AC008406.1-201ENST00000509530 BICRAQ9NZM4 1560 aa28.66■■■□□ 2.18
AC008406.1-201ENST00000509530 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
AC008406.1-201ENST00000509530 SCRIBQ14160 1630 aa28.52■■■□□ 2.16
AC008406.1-201ENST00000509530 PABPN1Q86U42 306 aaKnown RBP eCLIP28.51■■■□□ 2.15
AC008406.1-201ENST00000509530 DNAJC5BQ9UF47 199 aa28.03■■■□□ 2.08
AC008406.1-201ENST00000509530 EIF4G1Q04637 1599 aaKnown RBP27.88■■■□□ 2.05
AC008406.1-201ENST00000509530 CC2D2AQ9P2K1 1620 aa27.72■■■□□ 2.03
AC008406.1-201ENST00000509530 CECR2Q9BXF3 1484 aa27.53■■■□□ 2
AC008406.1-201ENST00000509530 BAZ1AQ9NRL2 1556 aaPredicted RBP27.4■■□□□ 1.98
AC008406.1-201ENST00000509530 SMARCA4P51532 1647 aa27.4■■□□□ 1.98
AC008406.1-201ENST00000509530 NCAPD3P42695 1498 aa27.31■■□□□ 1.96
AC008406.1-201ENST00000509530 SMARCA2P51531 1590 aa27.26■■□□□ 1.95
AC008406.1-201ENST00000509530 PEG3Q9GZU2 1588 aa27.26■■□□□ 1.95
AC008406.1-201ENST00000509530 ATAD2BQ9ULI0 1458 aa27.25■■□□□ 1.95
AC008406.1-201ENST00000509530 MROH2BQ7Z745 1585 aa27.18■■□□□ 1.94
AC008406.1-201ENST00000509530 HMGXB3Q12766 1538 aa27.17■■□□□ 1.94
AC008406.1-201ENST00000509530 BAZ1BQ9UIG0 1483 aaKnown RBP27■■□□□ 1.91
AC008406.1-201ENST00000509530 RSF1Q96T23 1441 aaPredicted RBP26.91■■□□□ 1.9
AC008406.1-201ENST00000509530 WIZO95785 1651 aa26.84■■□□□ 1.89
AC008406.1-201ENST00000509530 TOP2AP11388 1531 aaKnown RBP26.65■■□□□ 1.86
AC008406.1-201ENST00000509530 LAMC3Q9Y6N6 1575 aa26.55■■□□□ 1.84
AC008406.1-201ENST00000509530 NESP48681 1621 aa26.47■■□□□ 1.83
AC008406.1-201ENST00000509530 CADPSQ9ULU8 1353 aa26.46■■□□□ 1.83
AC008406.1-201ENST00000509530 ERCC6Q03468 1493 aa26.36■■□□□ 1.81
AC008406.1-201ENST00000509530 PDS5BQ9NTI5 1447 aa26.35■■□□□ 1.81
AC008406.1-201ENST00000509530 CFTRP13569 1480 aa26.34■■□□□ 1.81
AC008406.1-201ENST00000509530 CCDC88BA6NC98 1476 aa26.3■■□□□ 1.8
AC008406.1-201ENST00000509530 CUX2O14529 1486 aa26.22■■□□□ 1.79
AC008406.1-201ENST00000509530 KIF21AQ7Z4S6 1674 aa26.18■■□□□ 1.78
AC008406.1-201ENST00000509530 THOC2Q8NI27 1593 aaKnown RBP26.16■■□□□ 1.78
AC008406.1-201ENST00000509530 PRDM2Q13029 1718 aa26.11■■□□□ 1.77
AC008406.1-201ENST00000509530 FANCD2Q9BXW9 1451 aa26.11■■□□□ 1.77
AC008406.1-201ENST00000509530 CEP164Q9UPV0 1460 aa26.08■■□□□ 1.77
AC008406.1-201ENST00000509530 MRC2Q9UBG0 1479 aa26.05■■□□□ 1.76
AC008406.1-201ENST00000509530 SUPT5HO00267 1087 aaKnown RBP26.03■■□□□ 1.76
AC008406.1-201ENST00000509530 WDR62O43379 1518 aa26■■□□□ 1.75
AC008406.1-201ENST00000509530 URB2Q14146 1524 aaKnown RBP25.84■■□□□ 1.73
AC008406.1-201ENST00000509530 ABCC8Q09428 1581 aa25.8■■□□□ 1.72
AC008406.1-201ENST00000509530 DNMBPQ6XZF7 1577 aa25.7■■□□□ 1.71
AC008406.1-201ENST00000509530 TOPBP1Q92547 1522 aa25.7■■□□□ 1.7
AC008406.1-201ENST00000509530 IFT140Q96RY7 1462 aa25.57■■□□□ 1.68
AC008406.1-201ENST00000509530 CUX1P39880 1505 aa25.51■■□□□ 1.67
AC008406.1-201ENST00000509530 POLA1P09884 1462 aaPredicted RBP25.49■■□□□ 1.67
AC008406.1-201ENST00000509530 TARBP1Q13395 1621 aaKnown RBP25.45■■□□□ 1.67
AC008406.1-201ENST00000509530 FGD5Q6ZNL6 1462 aa25.4■■□□□ 1.66
AC008406.1-201ENST00000509530 WDR97A6NE52 1622 aa25.37■■□□□ 1.65
AC008406.1-201ENST00000509530 ZNF608Q9ULD9 1512 aaPredicted RBP25.37■■□□□ 1.65
AC008406.1-201ENST00000509530 SOGA1O94964 1423 aa25.36■■□□□ 1.65
AC008406.1-201ENST00000509530 WRNQ14191 1432 aaPredicted RBP eCLIP25.36■■□□□ 1.65
AC008406.1-201ENST00000509530 TOP2BQ02880 1626 aa25.34■■□□□ 1.65
AC008406.1-201ENST00000509530 BIVM-ERCC5R4GMW8 1640 aa25.34■■□□□ 1.65
AC008406.1-201ENST00000509530 DNAJC5Q9H3Z4 198 aa25.32■■□□□ 1.64
AC008406.1-201ENST00000509530 EIF4G3O43432 1585 aaKnown RBP25.3■■□□□ 1.64
AC008406.1-201ENST00000509530 RAD54L2Q9Y4B4 1467 aa25.29■■□□□ 1.64
AC008406.1-201ENST00000509530 SYNJ1O43426 1573 aa25.27■■□□□ 1.64
AC008406.1-201ENST00000509530 ABCA10Q8WWZ4 1543 aa25.23■■□□□ 1.63
AC008406.1-201ENST00000509530 AQRO60306 1485 aaKnown RBP eCLIP25.21■■□□□ 1.63
AC008406.1-201ENST00000509530 TDRD9Q8NDG6 1382 aaKnown RBP25.16■■□□□ 1.62
AC008406.1-201ENST00000509530 ABCA5Q8WWZ7 1642 aa25.11■■□□□ 1.61
AC008406.1-201ENST00000509530 GRIN2BQ13224 1484 aa25.1■■□□□ 1.61
AC008406.1-201ENST00000509530 GAPVD1Q14C86 1478 aa25.09■■□□□ 1.61
AC008406.1-201ENST00000509530 MAGI1Q96QZ7 1491 aaPredicted RBP25.08■■□□□ 1.6
AC008406.1-201ENST00000509530 OSCARQ8IYS5 282 aa25.05■■□□□ 1.6
AC008406.1-201ENST00000509530 SNAPC4Q5SXM2 1469 aa25■■□□□ 1.59
AC008406.1-201ENST00000509530 PBRM1Q86U86 1689 aa24.99■■□□□ 1.59
AC008406.1-201ENST00000509530 ERICH3Q5RHP9 1530 aa24.95■■□□□ 1.58
AC008406.1-201ENST00000509530 SYNJ2O15056 1496 aa24.95■■□□□ 1.58
AC008406.1-201ENST00000509530 CHD1O14646 1710 aa24.92■■□□□ 1.58
AC008406.1-201ENST00000509530 KIF27Q86VH2 1401 aa24.85■■□□□ 1.57
AC008406.1-201ENST00000509530 ADAMTS12P58397 1594 aa24.84■■□□□ 1.57
AC008406.1-201ENST00000509530 CHMP7Q8WUX9 453 aaPredicted RBP24.84■■□□□ 1.57
AC008406.1-201ENST00000509530 FHAD1B1AJZ9 1412 aa24.83■■□□□ 1.57
AC008406.1-201ENST00000509530 FBLN2P98095 1184 aa24.79■■□□□ 1.56
AC008406.1-201ENST00000509530 GRIN2AQ12879 1464 aa24.77■■□□□ 1.56
AC008406.1-201ENST00000509530 CLASP1Q7Z460 1538 aa24.76■■□□□ 1.55
AC008406.1-201ENST00000509530 IGF1RP08069 1367 aa24.75■■□□□ 1.55
AC008406.1-201ENST00000509530 NUP160Q12769 1436 aa24.71■■□□□ 1.55
AC008406.1-201ENST00000509530 CUL7Q14999 1698 aa24.7■■□□□ 1.54
AC008406.1-201ENST00000509530 TRIM41Q8WV44 630 aa24.69■■□□□ 1.54
AC008406.1-201ENST00000509530 ARHGEF11O15085 1522 aa24.65■■□□□ 1.54
AC008406.1-201ENST00000509530 RIMBP3CA6NJZ7 1639 aa24.62■■□□□ 1.53
AC008406.1-201ENST00000509530 RIMBP3BA6NNM3 1639 aa24.62■■□□□ 1.53
AC008406.1-201ENST00000509530 RIMBP3Q9UFD9 1639 aa24.62■■□□□ 1.53
AC008406.1-201ENST00000509530 CEP170Q5SW79 1584 aa24.61■■□□□ 1.53
AC008406.1-201ENST00000509530 CARMIL1Q5VZK9 1371 aa24.56■■□□□ 1.52
AC008406.1-201ENST00000509530 SHROOM2Q13796 1616 aa24.52■■□□□ 1.52
AC008406.1-201ENST00000509530 RUSC2Q8N2Y8 1516 aa24.51■■□□□ 1.51
AC008406.1-201ENST00000509530 KIAA0586Q9BVV6 1533 aa24.46■■□□□ 1.51
AC008406.1-201ENST00000509530 EEA1Q15075 1411 aa24.45■■□□□ 1.51
AC008406.1-201ENST00000509530 ARAP1Q96P48 1450 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms