RNA–Protein interactions for RNA: ENST00000509476.1

AC016642.1-202, humanhuman

TSL 3 BASIC

Gene AC016642.1, Length 641 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016642.1-202ENST00000509476 AEBP2Q6ZN18 517 aaPredicted RBP27.3■■□□□ 1.96
AC016642.1-202ENST00000509476 CHIC1Q5VXU3 224 aa26.51■■□□□ 1.83
AC016642.1-202ENST00000509476 SENP3Q9H4L4 574 aaPredicted RBP23.32■■□□□ 1.32
AC016642.1-202ENST00000509476 PHF23Q9BUL5 403 aaPredicted RBP23.21■■□□□ 1.31
AC016642.1-202ENST00000509476 FOXD1Q16676 465 aa21.58■■□□□ 1.05
AC016642.1-202ENST00000509476 PLPPR3Q6T4P5 718 aa21.45■■□□□ 1.02
AC016642.1-202ENST00000509476 PPP6R1Q9UPN7 881 aa20.54■□□□□ 0.88
AC016642.1-202ENST00000509476 ADRA2BP18089 450 aa20.51■□□□□ 0.87
AC016642.1-202ENST00000509476 PIAS4Q8N2W9 510 aaPredicted RBP20.32■□□□□ 0.84
AC016642.1-202ENST00000509476 MSH5O43196 834 aa20.1■□□□□ 0.81
AC016642.1-202ENST00000509476 SCAF1Q9H7N4 1312 aaKnown RBP18.91■□□□□ 0.62
AC016642.1-202ENST00000509476 PPP4R3CPQ6ZMV5 832 aa18.82■□□□□ 0.6
AC016642.1-202ENST00000509476 MAPK8IP2Q13387 824 aaPredicted RBP18.65■□□□□ 0.58
AC016642.1-202ENST00000509476 POTEDQ86YR6 584 aa18.63■□□□□ 0.57
AC016642.1-202ENST00000509476 DMRT2Q9Y5R5 561 aa18.54■□□□□ 0.56
AC016642.1-202ENST00000509476 CNKSR2Q8WXI2 1034 aa18.39■□□□□ 0.53
AC016642.1-202ENST00000509476 NCBP3Q53F19 620 aaKnown RBP18.34■□□□□ 0.53
AC016642.1-202ENST00000509476 RNF216Q9NWF9 866 aaPredicted RBP18.1■□□□□ 0.49
AC016642.1-202ENST00000509476 KCNA4P22459 653 aa18.08■□□□□ 0.48
AC016642.1-202ENST00000509476 HOXD11P31277 338 aaPredicted RBP18.08■□□□□ 0.48
AC016642.1-202ENST00000509476 NPM3O75607 178 aaKnown RBP17.99■□□□□ 0.47
AC016642.1-202ENST00000509476 DCAF8L1A6NGE4 600 aa17.7■□□□□ 0.42
AC016642.1-202ENST00000509476 DNAJC5BQ9UF47 199 aa17.64■□□□□ 0.41
AC016642.1-202ENST00000509476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.21■□□□□ 0.35
AC016642.1-202ENST00000509476 SLC4A1APQ9BWU0 796 aaKnown RBP17.21■□□□□ 0.35
AC016642.1-202ENST00000509476 RNF39Q9H2S5 420 aa17.16■□□□□ 0.34
AC016642.1-202ENST00000509476 SLC4A2P04920 1241 aa17.02■□□□□ 0.32
AC016642.1-202ENST00000509476 C1QBPQ07021 282 aaKnown RBP16.98■□□□□ 0.31
AC016642.1-202ENST00000509476 U3KPZ7 1027 aaPredicted RBP16.88■□□□□ 0.29
AC016642.1-202ENST00000509476 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
AC016642.1-202ENST00000509476 FOXD4L1Q9NU39 408 aa16.78■□□□□ 0.28
AC016642.1-202ENST00000509476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.71■□□□□ 0.27
AC016642.1-202ENST00000509476 HNRNPUL2Q1KMD3 747 aaKnown RBP16.71■□□□□ 0.27
AC016642.1-202ENST00000509476 MYCNP04198 464 aaPredicted RBP16.68■□□□□ 0.26
AC016642.1-202ENST00000509476 ZBTB22O15209 634 aa16.62■□□□□ 0.25
AC016642.1-202ENST00000509476 SAMD1Q6SPF0 538 aaPredicted RBP16.61■□□□□ 0.25
AC016642.1-202ENST00000509476 APLP2Q06481 763 aa16.6■□□□□ 0.25
AC016642.1-202ENST00000509476 SPINK5Q9NQ38 1064 aaPredicted RBP16.44■□□□□ 0.22
AC016642.1-202ENST00000509476 CAPN15O75808 1086 aa16.42■□□□□ 0.22
AC016642.1-202ENST00000509476 EHMT2Q96KQ7 1210 aa16.39■□□□□ 0.21
AC016642.1-202ENST00000509476 ZNF219Q9P2Y4 722 aaPredicted RBP16.37■□□□□ 0.21
AC016642.1-202ENST00000509476 CSRNP3Q8WYN3 585 aa16.34■□□□□ 0.21
AC016642.1-202ENST00000509476 ATXN8OSP0DMR3 200 aa16.28■□□□□ 0.2
AC016642.1-202ENST00000509476 TRHP20396 242 aaPredicted RBP16.27■□□□□ 0.2
AC016642.1-202ENST00000509476 DSG3P32926 999 aa16.22■□□□□ 0.19
AC016642.1-202ENST00000509476 ATF5Q9Y2D1 282 aaPredicted RBP16.14■□□□□ 0.17
AC016642.1-202ENST00000509476 ABCB7O75027 752 aa16.05■□□□□ 0.16
AC016642.1-202ENST00000509476 POLA2Q14181 598 aa15.97■□□□□ 0.15
AC016642.1-202ENST00000509476 NISCHQ9Y2I1 1504 aa15.94■□□□□ 0.14
AC016642.1-202ENST00000509476 ZBTB12Q9Y330 459 aaPredicted RBP15.81■□□□□ 0.12
AC016642.1-202ENST00000509476 FBLN2P98095 1184 aa15.59■□□□□ 0.09
AC016642.1-202ENST00000509476 RBM42Q9BTD8 480 aaKnown RBP15.55■□□□□ 0.08
AC016642.1-202ENST00000509476 MKRN4PQ13434 485 aaPredicted RBP15.45■□□□□ 0.06
AC016642.1-202ENST00000509476 OSCARQ8IYS5 282 aa15.43■□□□□ 0.06
AC016642.1-202ENST00000509476 SPDYE2BA6NHP3 402 aa15.32■□□□□ 0.04
AC016642.1-202ENST00000509476 SPDYE6P0CI01 402 aa15.32■□□□□ 0.04
AC016642.1-202ENST00000509476 SPDYE2Q495Y8 402 aa15.32■□□□□ 0.04
AC016642.1-202ENST00000509476 AKT1S1Q96B36 256 aa15.28■□□□□ 0.04
AC016642.1-202ENST00000509476 ZNF692Q9BU19 519 aaPredicted RBP15.18■□□□□ 0.02
AC016642.1-202ENST00000509476 SSUH2Q9Y2M2 353 aa15.16■□□□□ 0.02
AC016642.1-202ENST00000509476 REM2Q8IYK8 340 aaPredicted RBP15.08■□□□□ 0
AC016642.1-202ENST00000509476 SPDYE4A6NLX3 237 aa15.03■□□□□ -0
AC016642.1-202ENST00000509476 PABPN1Q86U42 306 aaKnown RBP eCLIP14.95□□□□□ -0.02
AC016642.1-202ENST00000509476 CHRDL2Q6WN34 429 aa14.93□□□□□ -0.02
AC016642.1-202ENST00000509476 SPDYE1Q8NFV5 336 aaPredicted RBP14.92□□□□□ -0.02
AC016642.1-202ENST00000509476 PITPNM1O00562 1244 aa14.9□□□□□ -0.02
AC016642.1-202ENST00000509476 PROM2Q8N271 834 aa14.8□□□□□ -0.04
AC016642.1-202ENST00000509476 FKBP8Q14318 412 aa14.79□□□□□ -0.04
AC016642.1-202ENST00000509476 CLEC11AQ9Y240 323 aa14.79□□□□□ -0.04
AC016642.1-202ENST00000509476 STAG3Q9UJ98 1225 aa14.75□□□□□ -0.05
AC016642.1-202ENST00000509476 POTEHQ6S545 545 aa14.73□□□□□ -0.05
AC016642.1-202ENST00000509476 FXR2P51116 673 aaKnown RBP eCLIP14.69□□□□□ -0.06
AC016642.1-202ENST00000509476 PIP4P2Q8N4L2 257 aa14.67□□□□□ -0.06
AC016642.1-202ENST00000509476 PRR29P0C7W0 189 aa14.66□□□□□ -0.06
AC016642.1-202ENST00000509476 PRKAR2AP13861 404 aaKnown RBP14.52□□□□□ -0.09
AC016642.1-202ENST00000509476 FBXO3Q9UK99 471 aa14.44□□□□□ -0.1
AC016642.1-202ENST00000509476 CHADLQ6NUI6 762 aa14.42□□□□□ -0.1
AC016642.1-202ENST00000509476 CREBZFQ9NS37 354 aa14.4□□□□□ -0.1
AC016642.1-202ENST00000509476 FARP1Q9Y4F1 1045 aaPredicted RBP14.33□□□□□ -0.12
AC016642.1-202ENST00000509476 PLEKHG5O94827 1062 aa14.31□□□□□ -0.12
AC016642.1-202ENST00000509476 MIER1Q8N108 512 aa14.27□□□□□ -0.13
AC016642.1-202ENST00000509476 HAX1O00165 279 aa14.26□□□□□ -0.13
AC016642.1-202ENST00000509476 PLCD3Q8N3E9 789 aa14.24□□□□□ -0.13
AC016642.1-202ENST00000509476 MNX1P50219 401 aaPredicted RBP14.23□□□□□ -0.13
AC016642.1-202ENST00000509476 NPM1P06748 294 aaKnown RBP eCLIP14.22□□□□□ -0.13
AC016642.1-202ENST00000509476 C19orf67A6NJJ6 358 aa14.2□□□□□ -0.14
AC016642.1-202ENST00000509476 ZBTB47Q9UFB7 747 aaPredicted RBP14.19□□□□□ -0.14
AC016642.1-202ENST00000509476 VASPP50552 380 aaPredicted RBP14.18□□□□□ -0.14
AC016642.1-202ENST00000509476 CCDC180Q9P1Z9 1646 aa14.18□□□□□ -0.14
AC016642.1-202ENST00000509476 CD44P16070 742 aaKnown RBP14.1□□□□□ -0.15
AC016642.1-202ENST00000509476 SLC24A1O60721 1099 aa14.07□□□□□ -0.16
AC016642.1-202ENST00000509476 SP7Q8TDD2 431 aaPredicted RBP14.06□□□□□ -0.16
AC016642.1-202ENST00000509476 PAK3O75914 559 aaPredicted RBP14.05□□□□□ -0.16
AC016642.1-202ENST00000509476 EVX2Q03828 476 aa14.05□□□□□ -0.16
AC016642.1-202ENST00000509476 KLHL34Q8N239 644 aa13.98□□□□□ -0.17
AC016642.1-202ENST00000509476 ZRANB1Q9UGI0 708 aa13.97□□□□□ -0.17
AC016642.1-202ENST00000509476 CLCN6P51797 869 aa13.95□□□□□ -0.18
AC016642.1-202ENST00000509476 ZNF579Q8NAF0 562 aaKnown RBP13.95□□□□□ -0.18
AC016642.1-202ENST00000509476 NUBP1P53384 320 aa13.94□□□□□ -0.18
AC016642.1-202ENST00000509476 IFNLR1Q8IU57 520 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms