RNA–Protein interactions for RNA: ENST00000509475.5

APBB2-218, Transcript of amyloid beta precursor protein binding family B member 2, humanhuman

TSL 2

Gene APBB2, Length 1,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB2-218ENST00000509475 NISCHQ9Y2I1 1504 aa46.43■■■■■ 5.02
APBB2-218ENST00000509475 CCDC180Q9P1Z9 1646 aa41.24■■■■■ 4.19
APBB2-218ENST00000509475 ABCC9O60706 1549 aa40.36■■■■■ 4.05
APBB2-218ENST00000509475 RB1CC1Q8TDY2 1594 aa38.84■■■■□ 3.81
APBB2-218ENST00000509475 NACADO15069 1562 aa38.81■■■■□ 3.8
APBB2-218ENST00000509475 DCAF8L2P0C7V8 631 aa38.79■■■■□ 3.8
APBB2-218ENST00000509475 ZCCHC6Q5VYS8 1495 aaKnown RBP38.68■■■■□ 3.78
APBB2-218ENST00000509475 MYO15BQ96JP2 1530 aa38.62■■■■□ 3.77
APBB2-218ENST00000509475 DCAF1Q9Y4B6 1507 aa38.44■■■■□ 3.74
APBB2-218ENST00000509475 UNC13AQ9UPW8 1703 aa37.82■■■■□ 3.64
APBB2-218ENST00000509475 PABPN1Q86U42 306 aaKnown RBP eCLIP37.71■■■■□ 3.63
APBB2-218ENST00000509475 BICRAQ9NZM4 1560 aa37.62■■■■□ 3.61
APBB2-218ENST00000509475 SCRIBQ14160 1630 aa37.61■■■■□ 3.61
APBB2-218ENST00000509475 SHROOM4Q9ULL8 1493 aa37.34■■■■□ 3.57
APBB2-218ENST00000509475 DNAJC5BQ9UF47 199 aa37.01■■■■□ 3.51
APBB2-218ENST00000509475 EIF4G1Q04637 1599 aaKnown RBP36.67■■■■□ 3.46
APBB2-218ENST00000509475 CC2D2AQ9P2K1 1620 aa36.48■■■■□ 3.43
APBB2-218ENST00000509475 CECR2Q9BXF3 1484 aa36.28■■■■□ 3.4
APBB2-218ENST00000509475 BAZ1AQ9NRL2 1556 aaPredicted RBP36■■■■□ 3.35
APBB2-218ENST00000509475 SMARCA4P51532 1647 aa35.99■■■■□ 3.35
APBB2-218ENST00000509475 NCAPD3P42695 1498 aa35.84■■■■□ 3.33
APBB2-218ENST00000509475 ATAD2BQ9ULI0 1458 aa35.83■■■■□ 3.33
APBB2-218ENST00000509475 SMARCA2P51531 1590 aa35.8■■■■□ 3.32
APBB2-218ENST00000509475 MROH2BQ7Z745 1585 aa35.75■■■■□ 3.31
APBB2-218ENST00000509475 PEG3Q9GZU2 1588 aa35.68■■■■□ 3.3
APBB2-218ENST00000509475 HMGXB3Q12766 1538 aa35.64■■■■□ 3.3
APBB2-218ENST00000509475 BAZ1BQ9UIG0 1483 aaKnown RBP35.55■■■■□ 3.28
APBB2-218ENST00000509475 RSF1Q96T23 1441 aaPredicted RBP35.38■■■■□ 3.25
APBB2-218ENST00000509475 WIZO95785 1651 aa35.33■■■■□ 3.25
APBB2-218ENST00000509475 TOP2AP11388 1531 aaKnown RBP35.01■■■■□ 3.2
APBB2-218ENST00000509475 NESP48681 1621 aa34.9■■■■□ 3.18
APBB2-218ENST00000509475 LAMC3Q9Y6N6 1575 aa34.86■■■■□ 3.17
APBB2-218ENST00000509475 ERCC6Q03468 1493 aa34.83■■■■□ 3.17
APBB2-218ENST00000509475 CADPSQ9ULU8 1353 aa34.79■■■■□ 3.16
APBB2-218ENST00000509475 PDS5BQ9NTI5 1447 aa34.66■■■■□ 3.14
APBB2-218ENST00000509475 CCDC88BA6NC98 1476 aa34.6■■■■□ 3.13
APBB2-218ENST00000509475 CFTRP13569 1480 aa34.58■■■■□ 3.13
APBB2-218ENST00000509475 SUPT5HO00267 1087 aaKnown RBP34.48■■■■□ 3.11
APBB2-218ENST00000509475 CUX2O14529 1486 aa34.45■■■■□ 3.11
APBB2-218ENST00000509475 KIF21AQ7Z4S6 1674 aa34.45■■■■□ 3.1
APBB2-218ENST00000509475 THOC2Q8NI27 1593 aaKnown RBP34.37■■■■□ 3.09
APBB2-218ENST00000509475 FANCD2Q9BXW9 1451 aa34.37■■■■□ 3.09
APBB2-218ENST00000509475 CEP164Q9UPV0 1460 aa34.34■■■■□ 3.09
APBB2-218ENST00000509475 MRC2Q9UBG0 1479 aa34.28■■■■□ 3.08
APBB2-218ENST00000509475 PRDM2Q13029 1718 aa34.19■■■■□ 3.06
APBB2-218ENST00000509475 WDR62O43379 1518 aa34.16■■■■□ 3.06
APBB2-218ENST00000509475 URB2Q14146 1524 aaKnown RBP34■■■■□ 3.03
APBB2-218ENST00000509475 ABCC8Q09428 1581 aa33.85■■■■□ 3.01
APBB2-218ENST00000509475 TOPBP1Q92547 1522 aa33.81■■■■□ 3
APBB2-218ENST00000509475 DNMBPQ6XZF7 1577 aa33.77■■■■□ 3
APBB2-218ENST00000509475 IFT140Q96RY7 1462 aa33.62■■■□□ 2.97
APBB2-218ENST00000509475 CUX1P39880 1505 aa33.54■■■□□ 2.96
APBB2-218ENST00000509475 POLA1P09884 1462 aaPredicted RBP33.53■■■□□ 2.96
APBB2-218ENST00000509475 FGD5Q6ZNL6 1462 aa33.44■■■□□ 2.94
APBB2-218ENST00000509475 ZNF608Q9ULD9 1512 aaPredicted RBP33.43■■■□□ 2.94
APBB2-218ENST00000509475 SOGA1O94964 1423 aa33.41■■■□□ 2.94
APBB2-218ENST00000509475 TARBP1Q13395 1621 aaKnown RBP33.41■■■□□ 2.94
APBB2-218ENST00000509475 DNAJC5Q9H3Z4 198 aa33.38■■■□□ 2.93
APBB2-218ENST00000509475 WRNQ14191 1432 aaPredicted RBP eCLIP33.38■■■□□ 2.93
APBB2-218ENST00000509475 RAD54L2Q9Y4B4 1467 aa33.36■■■□□ 2.93
APBB2-218ENST00000509475 EIF4G3O43432 1585 aaKnown RBP33.29■■■□□ 2.92
APBB2-218ENST00000509475 TOP2BQ02880 1626 aa33.27■■■□□ 2.92
APBB2-218ENST00000509475 AQRO60306 1485 aaKnown RBP eCLIP33.25■■■□□ 2.91
APBB2-218ENST00000509475 BIVM-ERCC5R4GMW8 1640 aa33.23■■■□□ 2.91
APBB2-218ENST00000509475 SYNJ1O43426 1573 aa33.23■■■□□ 2.91
APBB2-218ENST00000509475 TDRD9Q8NDG6 1382 aaKnown RBP33.21■■■□□ 2.91
APBB2-218ENST00000509475 WDR97A6NE52 1622 aa33.2■■■□□ 2.91
APBB2-218ENST00000509475 ABCA10Q8WWZ4 1543 aa33.14■■■□□ 2.9
APBB2-218ENST00000509475 OSCARQ8IYS5 282 aa33.05■■■□□ 2.88
APBB2-218ENST00000509475 GRIN2BQ13224 1484 aa33.03■■■□□ 2.88
APBB2-218ENST00000509475 GAPVD1Q14C86 1478 aa33.02■■■□□ 2.88
APBB2-218ENST00000509475 ABCA5Q8WWZ7 1642 aa32.97■■■□□ 2.87
APBB2-218ENST00000509475 SNAPC4Q5SXM2 1469 aa32.95■■■□□ 2.87
APBB2-218ENST00000509475 MAGI1Q96QZ7 1491 aaPredicted RBP32.94■■■□□ 2.86
APBB2-218ENST00000509475 FBLN2P98095 1184 aa32.87■■■□□ 2.85
APBB2-218ENST00000509475 PBRM1Q86U86 1689 aa32.86■■■□□ 2.85
APBB2-218ENST00000509475 CHMP7Q8WUX9 453 aaPredicted RBP32.81■■■□□ 2.84
APBB2-218ENST00000509475 SYNJ2O15056 1496 aa32.81■■■□□ 2.84
APBB2-218ENST00000509475 CHD1O14646 1710 aa32.81■■■□□ 2.84
APBB2-218ENST00000509475 ERICH3Q5RHP9 1530 aa32.75■■■□□ 2.83
APBB2-218ENST00000509475 KIF27Q86VH2 1401 aa32.7■■■□□ 2.83
APBB2-218ENST00000509475 ADAMTS12P58397 1594 aa32.66■■■□□ 2.82
APBB2-218ENST00000509475 FHAD1B1AJZ9 1412 aa32.65■■■□□ 2.82
APBB2-218ENST00000509475 TRIM41Q8WV44 630 aa32.61■■■□□ 2.81
APBB2-218ENST00000509475 GRIN2AQ12879 1464 aa32.59■■■□□ 2.81
APBB2-218ENST00000509475 IGF1RP08069 1367 aa32.53■■■□□ 2.8
APBB2-218ENST00000509475 CLASP1Q7Z460 1538 aa32.53■■■□□ 2.8
APBB2-218ENST00000509475 ARHGEF11O15085 1522 aa32.47■■■□□ 2.79
APBB2-218ENST00000509475 NUP160Q12769 1436 aa32.45■■■□□ 2.79
APBB2-218ENST00000509475 RIMBP3CA6NJZ7 1639 aa32.43■■■□□ 2.78
APBB2-218ENST00000509475 RIMBP3BA6NNM3 1639 aa32.43■■■□□ 2.78
APBB2-218ENST00000509475 RIMBP3Q9UFD9 1639 aa32.43■■■□□ 2.78
APBB2-218ENST00000509475 CUL7Q14999 1698 aa32.43■■■□□ 2.78
APBB2-218ENST00000509475 CEP170Q5SW79 1584 aa32.39■■■□□ 2.78
APBB2-218ENST00000509475 CARMIL1Q5VZK9 1371 aa32.35■■■□□ 2.77
APBB2-218ENST00000509475 RUSC2Q8N2Y8 1516 aa32.32■■■□□ 2.76
APBB2-218ENST00000509475 ARAP1Q96P48 1450 aa32.2■■■□□ 2.75
APBB2-218ENST00000509475 CYB5RLQ6IPT4 315 aa32.18■■■□□ 2.74
APBB2-218ENST00000509475 CHIC1Q5VXU3 224 aa32.17■■■□□ 2.74
APBB2-218ENST00000509475 SHROOM2Q13796 1616 aa32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms