RNA–Protein interactions for RNA: ENST00000508832.2

MALAT1-201, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2 BASIC

Gene MALAT1, Length 1,519 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-201ENST00000508832 HNRNPUQ00839 825 aaKnown RBP eCLIP12.43□□□□□ -0.42not detected■□□□□ 8.4
MALAT1-201ENST00000508832 KHSRPQ92945 711 aaKnown RBP eCLIP12.22□□□□□ -0.45not detected■■□□□ 13.8
MALAT1-201ENST00000508832 SAFB2Q14151 953 aaKnown RBP eCLIP10.94□□□□□ -0.66not detected■□□□□ 9.6
MALAT1-201ENST00000508832 U2AF2P26368 475 aaKnown RBP eCLIP10.61□□□□□ -0.71not detected■□□□□ 8.2
MALAT1-201ENST00000508832 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.53□□□□□ -0.72not detected■□□□□ 10
MALAT1-201ENST00000508832 SAFBQ15424 915 aaKnown RBP eCLIP10.33□□□□□ -0.76not detected■□□□□ 8.2
MALAT1-201ENST00000508832 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.66□□□□□ -0.86not detected■□□□□ 9.7
MALAT1-201ENST00000508832 PCBP2Q15366 365 aaKnown RBP eCLIP8.93□□□□□ -0.98not detected■□□□□ 8.1
MALAT1-201ENST00000508832 CPSF6Q16630 551 aaKnown RBP eCLIP8.7□□□□□ -1.02not detected■■■□□ 16.2
MALAT1-201ENST00000508832 SRSF7Q16629 238 aaKnown RBP eCLIP7.95□□□□□ -1.14not detected■□□□□ 9.8
MALAT1-201ENST00000508832 NIPBLQ6KC79 2804 aaeCLIP5.48□□□□□ -1.53not detected■□□□□ 8.9
MALAT1-201ENST00000508832 SLBPQ14493 270 aaKnown RBP eCLIP8.54□□□□□ -1.04not detected■■□□□ 13.1
MALAT1-201ENST00000508832 TIA1P31483 386 aaKnown RBP eCLIP8.65□□□□□ -1.02not detected■■■■■ 30.8
MALAT1-201ENST00000508832 HNRNPA1P09651 372 aaKnown RBP eCLIP8.3□□□□□ -1.08not detected■□□□□ 10.4
Retrieved 14 of 14 RNA–protein pairs in 4.5 ms