RNA–Protein interactions for RNA: ENST00000508415.1

AFAP1-206, Transcript of actin filament associated protein 1, humanhuman

TSL 4

Gene AFAP1, Length 546 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1-206ENST00000508415 NISCHQ9Y2I1 1504 aa23.44■■□□□ 1.34
AFAP1-206ENST00000508415 CCDC180Q9P1Z9 1646 aa20.64■□□□□ 0.9
AFAP1-206ENST00000508415 ABCC9O60706 1549 aa20.02■□□□□ 0.79
AFAP1-206ENST00000508415 DCAF8L2P0C7V8 631 aa19.72■□□□□ 0.75
AFAP1-206ENST00000508415 ZCCHC6Q5VYS8 1495 aaKnown RBP19.56■□□□□ 0.72
AFAP1-206ENST00000508415 NACADO15069 1562 aa19.35■□□□□ 0.69
AFAP1-206ENST00000508415 DCAF1Q9Y4B6 1507 aa19.32■□□□□ 0.68
AFAP1-206ENST00000508415 RB1CC1Q8TDY2 1594 aa19.32■□□□□ 0.68
AFAP1-206ENST00000508415 MYO15BQ96JP2 1530 aa19.25■□□□□ 0.67
AFAP1-206ENST00000508415 SCRIBQ14160 1630 aa18.99■□□□□ 0.63
AFAP1-206ENST00000508415 UNC13AQ9UPW8 1703 aa18.94■□□□□ 0.62
AFAP1-206ENST00000508415 SHROOM4Q9ULL8 1493 aa18.93■□□□□ 0.62
AFAP1-206ENST00000508415 PABPN1Q86U42 306 aaKnown RBP eCLIP18.84■□□□□ 0.61
AFAP1-206ENST00000508415 BICRAQ9NZM4 1560 aa18.71■□□□□ 0.59
AFAP1-206ENST00000508415 DNAJC5BQ9UF47 199 aa18.55■□□□□ 0.56
AFAP1-206ENST00000508415 CECR2Q9BXF3 1484 aa18.27■□□□□ 0.52
AFAP1-206ENST00000508415 EIF4G1Q04637 1599 aaKnown RBP18.19■□□□□ 0.5
AFAP1-206ENST00000508415 BAZ1AQ9NRL2 1556 aaPredicted RBP18.13■□□□□ 0.49
AFAP1-206ENST00000508415 SMARCA4P51532 1647 aa18.12■□□□□ 0.49
AFAP1-206ENST00000508415 MROH2BQ7Z745 1585 aa18.11■□□□□ 0.49
AFAP1-206ENST00000508415 CC2D2AQ9P2K1 1620 aa18.07■□□□□ 0.48
AFAP1-206ENST00000508415 SUPT5HO00267 1087 aaKnown RBP18.03■□□□□ 0.48
AFAP1-206ENST00000508415 RSF1Q96T23 1441 aaPredicted RBP18.02■□□□□ 0.48
AFAP1-206ENST00000508415 WIZO95785 1651 aa17.97■□□□□ 0.47
AFAP1-206ENST00000508415 ATAD2BQ9ULI0 1458 aa17.94■□□□□ 0.46
AFAP1-206ENST00000508415 SMARCA2P51531 1590 aa17.93■□□□□ 0.46
AFAP1-206ENST00000508415 PEG3Q9GZU2 1588 aa17.86■□□□□ 0.45
AFAP1-206ENST00000508415 NCAPD3P42695 1498 aa17.84■□□□□ 0.45
AFAP1-206ENST00000508415 BAZ1BQ9UIG0 1483 aaKnown RBP17.84■□□□□ 0.45
AFAP1-206ENST00000508415 HMGXB3Q12766 1538 aa17.77■□□□□ 0.43
AFAP1-206ENST00000508415 TOP2AP11388 1531 aaKnown RBP17.72■□□□□ 0.43
AFAP1-206ENST00000508415 CCDC88BA6NC98 1476 aa17.57■□□□□ 0.4
AFAP1-206ENST00000508415 NESP48681 1621 aa17.41■□□□□ 0.38
AFAP1-206ENST00000508415 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
AFAP1-206ENST00000508415 LAMC3Q9Y6N6 1575 aa17.33■□□□□ 0.37
AFAP1-206ENST00000508415 CFTRP13569 1480 aa17.31■□□□□ 0.36
AFAP1-206ENST00000508415 PRDM2Q13029 1718 aa17.26■□□□□ 0.35
AFAP1-206ENST00000508415 PDS5BQ9NTI5 1447 aa17.25■□□□□ 0.35
AFAP1-206ENST00000508415 ERCC6Q03468 1493 aa17.24■□□□□ 0.35
AFAP1-206ENST00000508415 FANCD2Q9BXW9 1451 aa17.21■□□□□ 0.35
AFAP1-206ENST00000508415 KIF21AQ7Z4S6 1674 aa17.2■□□□□ 0.34
AFAP1-206ENST00000508415 CEP164Q9UPV0 1460 aa17.15■□□□□ 0.34
AFAP1-206ENST00000508415 CUX2O14529 1486 aa17.1■□□□□ 0.33
AFAP1-206ENST00000508415 DNAJC5Q9H3Z4 198 aa17.08■□□□□ 0.32
AFAP1-206ENST00000508415 ABCC8Q09428 1581 aa17.06■□□□□ 0.32
AFAP1-206ENST00000508415 MRC2Q9UBG0 1479 aa17.04■□□□□ 0.32
AFAP1-206ENST00000508415 URB2Q14146 1524 aaKnown RBP17.01■□□□□ 0.31
AFAP1-206ENST00000508415 WRNQ14191 1432 aaPredicted RBP eCLIP17■□□□□ 0.31
AFAP1-206ENST00000508415 THOC2Q8NI27 1593 aaKnown RBP16.98■□□□□ 0.31
AFAP1-206ENST00000508415 CUX1P39880 1505 aa16.96■□□□□ 0.31
AFAP1-206ENST00000508415 TOPBP1Q92547 1522 aa16.96■□□□□ 0.31
AFAP1-206ENST00000508415 DNMBPQ6XZF7 1577 aa16.95■□□□□ 0.3
AFAP1-206ENST00000508415 CHIC1Q5VXU3 224 aa16.95■□□□□ 0.3
AFAP1-206ENST00000508415 TRIM41Q8WV44 630 aa16.95■□□□□ 0.3
AFAP1-206ENST00000508415 SYNJ1O43426 1573 aa16.92■□□□□ 0.3
AFAP1-206ENST00000508415 WDR62O43379 1518 aa16.91■□□□□ 0.3
AFAP1-206ENST00000508415 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
AFAP1-206ENST00000508415 BIVM-ERCC5R4GMW8 1640 aa16.87■□□□□ 0.29
AFAP1-206ENST00000508415 FGD5Q6ZNL6 1462 aa16.86■□□□□ 0.29
AFAP1-206ENST00000508415 SOGA1O94964 1423 aa16.83■□□□□ 0.28
AFAP1-206ENST00000508415 POLA1P09884 1462 aaPredicted RBP16.82■□□□□ 0.28
AFAP1-206ENST00000508415 RAD54L2Q9Y4B4 1467 aa16.82■□□□□ 0.28
AFAP1-206ENST00000508415 IFT140Q96RY7 1462 aa16.76■□□□□ 0.27
AFAP1-206ENST00000508415 TARBP1Q13395 1621 aaKnown RBP16.72■□□□□ 0.27
AFAP1-206ENST00000508415 TDRD9Q8NDG6 1382 aaKnown RBP16.72■□□□□ 0.27
AFAP1-206ENST00000508415 FAM9AQ8IZU1 332 aaPredicted RBP16.69■□□□□ 0.26
AFAP1-206ENST00000508415 ZNF608Q9ULD9 1512 aaPredicted RBP16.69■□□□□ 0.26
AFAP1-206ENST00000508415 AQRO60306 1485 aaKnown RBP eCLIP16.67■□□□□ 0.26
AFAP1-206ENST00000508415 ABCA10Q8WWZ4 1543 aa16.67■□□□□ 0.26
AFAP1-206ENST00000508415 WDR97A6NE52 1622 aa16.64■□□□□ 0.25
AFAP1-206ENST00000508415 KIF27Q86VH2 1401 aa16.62■□□□□ 0.25
AFAP1-206ENST00000508415 RUSC2Q8N2Y8 1516 aa16.62■□□□□ 0.25
AFAP1-206ENST00000508415 AEBP2Q6ZN18 517 aaPredicted RBP16.62■□□□□ 0.25
AFAP1-206ENST00000508415 GAPVD1Q14C86 1478 aa16.61■□□□□ 0.25
AFAP1-206ENST00000508415 EIF4G3O43432 1585 aaKnown RBP16.6■□□□□ 0.25
AFAP1-206ENST00000508415 PBRM1Q86U86 1689 aa16.56■□□□□ 0.24
AFAP1-206ENST00000508415 ABCA5Q8WWZ7 1642 aa16.56■□□□□ 0.24
AFAP1-206ENST00000508415 GRIN2BQ13224 1484 aa16.54■□□□□ 0.24
AFAP1-206ENST00000508415 CSRNP3Q8WYN3 585 aa16.53■□□□□ 0.24
AFAP1-206ENST00000508415 FBLN2P98095 1184 aa16.52■□□□□ 0.24
AFAP1-206ENST00000508415 EHMT2Q96KQ7 1210 aa16.52■□□□□ 0.24
AFAP1-206ENST00000508415 IGF1RP08069 1367 aa16.51■□□□□ 0.23
AFAP1-206ENST00000508415 SNAPC4Q5SXM2 1469 aa16.49■□□□□ 0.23
AFAP1-206ENST00000508415 EEA1Q15075 1411 aa16.49■□□□□ 0.23
AFAP1-206ENST00000508415 ERICH3Q5RHP9 1530 aa16.47■□□□□ 0.23
AFAP1-206ENST00000508415 CHMP7Q8WUX9 453 aaPredicted RBP16.47■□□□□ 0.23
AFAP1-206ENST00000508415 CARMIL1Q5VZK9 1371 aa16.46■□□□□ 0.23
AFAP1-206ENST00000508415 MAGI1Q96QZ7 1491 aaPredicted RBP16.43■□□□□ 0.22
AFAP1-206ENST00000508415 FHAD1B1AJZ9 1412 aa16.42■□□□□ 0.22
AFAP1-206ENST00000508415 CUL7Q14999 1698 aa16.41■□□□□ 0.22
AFAP1-206ENST00000508415 ADAMTS12P58397 1594 aa16.4■□□□□ 0.22
AFAP1-206ENST00000508415 OSCARQ8IYS5 282 aa16.4■□□□□ 0.22
AFAP1-206ENST00000508415 CHD1O14646 1710 aa16.39■□□□□ 0.21
AFAP1-206ENST00000508415 SYNJ2O15056 1496 aa16.38■□□□□ 0.21
AFAP1-206ENST00000508415 RAPGEF2Q9Y4G8 1499 aa16.35■□□□□ 0.21
AFAP1-206ENST00000508415 UBTFP17480 764 aaKnown RBP16.35■□□□□ 0.21
AFAP1-206ENST00000508415 LOC105371045A0A1W2PR82 267 aa16.34■□□□□ 0.21
AFAP1-206ENST00000508415 PRXQ9BXM0 1461 aa16.34■□□□□ 0.21
AFAP1-206ENST00000508415 GRIN2AQ12879 1464 aa16.32■□□□□ 0.2
AFAP1-206ENST00000508415 KIF21BO75037 1637 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms