RNA–Protein interactions for RNA: ENST00000508002.5

SPP1-206, Transcript of secreted phosphoprotein 1, humanhuman

TSL 1 (best)

Gene SPP1, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPP1-206ENST00000508002 AEBP2Q6ZN18 517 aaPredicted RBP31.41■■■□□ 2.62
SPP1-206ENST00000508002 CHIC1Q5VXU3 224 aa29.42■■■□□ 2.3
SPP1-206ENST00000508002 SENP3Q9H4L4 574 aaPredicted RBP26.96■■□□□ 1.91
SPP1-206ENST00000508002 PHF23Q9BUL5 403 aaPredicted RBP26.5■■□□□ 1.83
SPP1-206ENST00000508002 FOXD1Q16676 465 aa25.18■■□□□ 1.62
SPP1-206ENST00000508002 POTEDQ86YR6 584 aa24.4■■□□□ 1.5
SPP1-206ENST00000508002 MSH5O43196 834 aa23.86■■□□□ 1.41
SPP1-206ENST00000508002 PIAS4Q8N2W9 510 aaPredicted RBP23.41■■□□□ 1.34
SPP1-206ENST00000508002 PLPPR3Q6T4P5 718 aa23.06■■□□□ 1.28
SPP1-206ENST00000508002 PPP6R1Q9UPN7 881 aa23.01■■□□□ 1.27
SPP1-206ENST00000508002 ADRA2BP18089 450 aa22.92■■□□□ 1.26
SPP1-206ENST00000508002 MAPK8IP2Q13387 824 aaPredicted RBP21.25■□□□□ 0.99
SPP1-206ENST00000508002 DMRT2Q9Y5R5 561 aa21.25■□□□□ 0.99
SPP1-206ENST00000508002 SCAF1Q9H7N4 1312 aaKnown RBP21.04■□□□□ 0.96
SPP1-206ENST00000508002 CACNB1Q02641 598 aaPredicted RBP20.91■□□□□ 0.94
SPP1-206ENST00000508002 DCAF8L1A6NGE4 600 aa20.5■□□□□ 0.87
SPP1-206ENST00000508002 RNF39Q9H2S5 420 aa20.27■□□□□ 0.84
SPP1-206ENST00000508002 HOXD11P31277 338 aaPredicted RBP20.19■□□□□ 0.82
SPP1-206ENST00000508002 PPP4R3CPQ6ZMV5 832 aa20.12■□□□□ 0.81
SPP1-206ENST00000508002 C1QBPQ07021 282 aaKnown RBP19.96■□□□□ 0.79
SPP1-206ENST00000508002 CNKSR2Q8WXI2 1034 aa19.9■□□□□ 0.78
SPP1-206ENST00000508002 RNF216Q9NWF9 866 aaPredicted RBP19.88■□□□□ 0.77
SPP1-206ENST00000508002 DNAJC5BQ9UF47 199 aa19.62■□□□□ 0.73
SPP1-206ENST00000508002 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.31■□□□□ 0.681e-9■■□□□ 13.9
SPP1-206ENST00000508002 NCBP3Q53F19 620 aaKnown RBP19.18■□□□□ 0.66
SPP1-206ENST00000508002 POTEHQ6S545 545 aa19.01■□□□□ 0.63
SPP1-206ENST00000508002 NPM3O75607 178 aaKnown RBP18.85■□□□□ 0.61
SPP1-206ENST00000508002 U3KPZ7 1027 aaPredicted RBP18.77■□□□□ 0.6
SPP1-206ENST00000508002 CAPN15O75808 1086 aa18.76■□□□□ 0.59
SPP1-206ENST00000508002 DSG3P32926 999 aa18.75■□□□□ 0.59
SPP1-206ENST00000508002 SPINK5Q9NQ38 1064 aaPredicted RBP18.71■□□□□ 0.59
SPP1-206ENST00000508002 TRHP20396 242 aaPredicted RBP18.3■□□□□ 0.52
SPP1-206ENST00000508002 ABCB7O75027 752 aa18.25■□□□□ 0.51
SPP1-206ENST00000508002 APLP2Q06481 763 aa18.25■□□□□ 0.51
SPP1-206ENST00000508002 ZNF219Q9P2Y4 722 aaPredicted RBP18.22■□□□□ 0.51
SPP1-206ENST00000508002 SLC4A2P04920 1241 aa18.15■□□□□ 0.5
SPP1-206ENST00000508002 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.06■□□□□ 0.48
SPP1-206ENST00000508002 HNRNPUL2Q1KMD3 747 aaKnown RBP18.06■□□□□ 0.48
SPP1-206ENST00000508002 RBM42Q9BTD8 480 aaKnown RBP17.97■□□□□ 0.47
SPP1-206ENST00000508002 SAMD1Q6SPF0 538 aaPredicted RBP17.91■□□□□ 0.46
SPP1-206ENST00000508002 KCNA4P22459 653 aa17.9■□□□□ 0.46
SPP1-206ENST00000508002 CHRDL2Q6WN34 429 aa17.82■□□□□ 0.44
SPP1-206ENST00000508002 POLA2Q14181 598 aa17.63■□□□□ 0.41
SPP1-206ENST00000508002 SP7Q8TDD2 431 aaPredicted RBP17.51■□□□□ 0.39
SPP1-206ENST00000508002 MYCNP04198 464 aaPredicted RBP17.48■□□□□ 0.39
SPP1-206ENST00000508002 AKT1S1Q96B36 256 aa17.38■□□□□ 0.37
SPP1-206ENST00000508002 ZBTB12Q9Y330 459 aaPredicted RBP17.24■□□□□ 0.35
SPP1-206ENST00000508002 PIP4P2Q8N4L2 257 aa17.23■□□□□ 0.35
SPP1-206ENST00000508002 REM2Q8IYK8 340 aaPredicted RBP17.22■□□□□ 0.35
SPP1-206ENST00000508002 HAX1O00165 279 aa17.15■□□□□ 0.34
SPP1-206ENST00000508002 OSCARQ8IYS5 282 aa17.09■□□□□ 0.33
SPP1-206ENST00000508002 ATF5Q9Y2D1 282 aaPredicted RBP17.09■□□□□ 0.33
SPP1-206ENST00000508002 PITPNM1O00562 1244 aa17.04■□□□□ 0.32
SPP1-206ENST00000508002 FXR2P51116 673 aaKnown RBP eCLIP17■□□□□ 0.31
SPP1-206ENST00000508002 FOXD4L1Q9NU39 408 aa16.93■□□□□ 0.3
SPP1-206ENST00000508002 EVX2Q03828 476 aa16.81■□□□□ 0.28
SPP1-206ENST00000508002 SLC4A1APQ9BWU0 796 aaKnown RBP16.79■□□□□ 0.28
SPP1-206ENST00000508002 SPDYE2BA6NHP3 402 aa16.63■□□□□ 0.25
SPP1-206ENST00000508002 SPDYE6P0CI01 402 aa16.63■□□□□ 0.25
SPP1-206ENST00000508002 SPDYE2Q495Y8 402 aa16.63■□□□□ 0.25
SPP1-206ENST00000508002 PRKAR2AP13861 404 aaKnown RBP16.61■□□□□ 0.25
SPP1-206ENST00000508002 FBLN2P98095 1184 aa16.55■□□□□ 0.24
SPP1-206ENST00000508002 CLEC11AQ9Y240 323 aa16.55■□□□□ 0.24
SPP1-206ENST00000508002 SPDYE1Q8NFV5 336 aaPredicted RBP16.53■□□□□ 0.24
SPP1-206ENST00000508002 C19orf67A6NJJ6 358 aa16.49■□□□□ 0.23
SPP1-206ENST00000508002 ATXN8OSP0DMR3 200 aa16.46■□□□□ 0.23
SPP1-206ENST00000508002 GABBR2O75899 941 aa16.43■□□□□ 0.22
SPP1-206ENST00000508002 LHX8Q68G74 356 aa16.42■□□□□ 0.22
SPP1-206ENST00000508002 ZBTB22O15209 634 aa16.41■□□□□ 0.22
SPP1-206ENST00000508002 ZNF692Q9BU19 519 aaPredicted RBP16.34■□□□□ 0.21
SPP1-206ENST00000508002 SSUH2Q9Y2M2 353 aa16.31■□□□□ 0.2
SPP1-206ENST00000508002 CHADLQ6NUI6 762 aa16.27■□□□□ 0.2
SPP1-206ENST00000508002 MKRN4PQ13434 485 aaPredicted RBP16.26■□□□□ 0.19
SPP1-206ENST00000508002 PRR29P0C7W0 189 aa16.17■□□□□ 0.18
SPP1-206ENST00000508002 PABPN1Q86U42 306 aaKnown RBP eCLIP16.07■□□□□ 0.16
SPP1-206ENST00000508002 POTEIP0CG38 1075 aa16.04■□□□□ 0.16
SPP1-206ENST00000508002 CD44P16070 742 aaKnown RBP16.04■□□□□ 0.16
SPP1-206ENST00000508002 PLSCR2Q9NRY7 297 aa15.98■□□□□ 0.15
SPP1-206ENST00000508002 FARP1Q9Y4F1 1045 aaPredicted RBP15.96■□□□□ 0.15
SPP1-206ENST00000508002 CLCN6P51797 869 aa15.95■□□□□ 0.14
SPP1-206ENST00000508002 DCBLD2Q96PD2 775 aa15.9■□□□□ 0.14
SPP1-206ENST00000508002 ZNF579Q8NAF0 562 aaKnown RBP15.74■□□□□ 0.11
SPP1-206ENST00000508002 ZRANB1Q9UGI0 708 aa15.73■□□□□ 0.11
SPP1-206ENST00000508002 GALR2O43603 387 aaPredicted RBP15.61■□□□□ 0.09
SPP1-206ENST00000508002 OTUD5Q96G74 571 aa15.6■□□□□ 0.09
SPP1-206ENST00000508002 CREBZFQ9NS37 354 aa15.56■□□□□ 0.08
SPP1-206ENST00000508002 POTEMA6NI47 508 aa15.5■□□□□ 0.07
SPP1-206ENST00000508002 POTEB2H3BUK9 544 aa15.5■□□□□ 0.07
SPP1-206ENST00000508002 STAG3Q9UJ98 1225 aa15.5■□□□□ 0.07
SPP1-206ENST00000508002 PAK3O75914 559 aaPredicted RBP15.49■□□□□ 0.07
SPP1-206ENST00000508002 POTEGQ6S5H5 508 aa15.44■□□□□ 0.06
SPP1-206ENST00000508002 PHF12Q96QT6 1004 aa15.43■□□□□ 0.06
SPP1-206ENST00000508002 PELP1Q8IZL8 1130 aaKnown RBP15.34■□□□□ 0.05
SPP1-206ENST00000508002 NPM1P06748 294 aaKnown RBP eCLIP15.31■□□□□ 0.04
SPP1-206ENST00000508002 PCDH10Q9P2E7 1040 aa15.28■□□□□ 0.04
SPP1-206ENST00000508002 METRNQ9UJH8 293 aa15.27■□□□□ 0.04
SPP1-206ENST00000508002 ASTLQ6HA08 431 aaPredicted RBP15.22■□□□□ 0.03
SPP1-206ENST00000508002 SLC39A7Q92504 469 aa15.22■□□□□ 0.03
SPP1-206ENST00000508002 C7P10643 843 aa15.21■□□□□ 0.03
SPP1-206ENST00000508002 SPDYE4A6NLX3 237 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms