RNA–Protein interactions for RNA: ENST00000507489.1

NFXL1-206, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFXL1, Length 3,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-206ENST00000507489 NISCHQ9Y2I1 1504 aa21.87■■□□□ 1.09
NFXL1-206ENST00000507489 DCAF8L2P0C7V8 631 aa21.3■■□□□ 1
NFXL1-206ENST00000507489 SHROOM4Q9ULL8 1493 aa20.76■□□□□ 0.91
NFXL1-206ENST00000507489 SUPT5HO00267 1087 aaKnown RBP20.72■□□□□ 0.91
NFXL1-206ENST00000507489 EHMT2Q96KQ7 1210 aa19.95■□□□□ 0.78
NFXL1-206ENST00000507489 FAM9AQ8IZU1 332 aaPredicted RBP19.49■□□□□ 0.71
NFXL1-206ENST00000507489 PCGF6Q9BYE7 350 aa19.38■□□□□ 0.69
NFXL1-206ENST00000507489 TTBK1Q5TCY1 1321 aaPredicted RBP19.2■□□□□ 0.66
NFXL1-206ENST00000507489 LOC105371045A0A1W2PR82 267 aa19.02■□□□□ 0.63
NFXL1-206ENST00000507489 CHIC1Q5VXU3 224 aa18.96■□□□□ 0.63
NFXL1-206ENST00000507489 PPARGC1BQ86YN6 1023 aaKnown RBP18.96■□□□□ 0.63
NFXL1-206ENST00000507489 TRIM41Q8WV44 630 aa18.94■□□□□ 0.62
NFXL1-206ENST00000507489 RANGAP1P46060 587 aaPredicted RBP18.85■□□□□ 0.61
NFXL1-206ENST00000507489 HRCP23327 699 aa18.52■□□□□ 0.55
NFXL1-206ENST00000507489 UBTFP17480 764 aaKnown RBP18.49■□□□□ 0.55
NFXL1-206ENST00000507489 ABCC9O60706 1549 aa18.45■□□□□ 0.54
NFXL1-206ENST00000507489 CCER1Q8TC90 406 aaPredicted RBP18.45■□□□□ 0.54
NFXL1-206ENST00000507489 APLP2Q06481 763 aa18.41■□□□□ 0.54
NFXL1-206ENST00000507489 TRIM26Q12899 539 aaPredicted RBP18.37■□□□□ 0.53
NFXL1-206ENST00000507489 PABPN1Q86U42 306 aaKnown RBP eCLIP18.3■□□□□ 0.52
NFXL1-206ENST00000507489 ATP1B4Q9UN42 357 aaPredicted RBP18.21■□□□□ 0.51
NFXL1-206ENST00000507489 ZCCHC6Q5VYS8 1495 aaKnown RBP18.21■□□□□ 0.51
NFXL1-206ENST00000507489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.17■□□□□ 0.5
NFXL1-206ENST00000507489 YTHDC1Q96MU7 727 aaKnown RBP18.12■□□□□ 0.49
NFXL1-206ENST00000507489 MYO15BQ96JP2 1530 aa18.11■□□□□ 0.49
NFXL1-206ENST00000507489 ZEB1P37275 1124 aaPredicted RBP18.11■□□□□ 0.49
NFXL1-206ENST00000507489 HNRNPUL2Q1KMD3 747 aaKnown RBP18.08■□□□□ 0.48
NFXL1-206ENST00000507489 ITGAEP38570 1179 aa18.02■□□□□ 0.48
NFXL1-206ENST00000507489 SLC24A1O60721 1099 aa18.01■□□□□ 0.47
NFXL1-206ENST00000507489 SCRIBQ14160 1630 aa17.98■□□□□ 0.47
NFXL1-206ENST00000507489 CENPBP07199 599 aaPredicted RBP17.8■□□□□ 0.44
NFXL1-206ENST00000507489 CCDC180Q9P1Z9 1646 aa17.74■□□□□ 0.43
NFXL1-206ENST00000507489 DIEXFQ68CQ4 756 aaKnown RBP17.64■□□□□ 0.41
NFXL1-206ENST00000507489 RSF1Q96T23 1441 aaPredicted RBP17.63■□□□□ 0.41
NFXL1-206ENST00000507489 CSRNP3Q8WYN3 585 aa17.59■□□□□ 0.41
NFXL1-206ENST00000507489 CNGB1Q14028 1251 aaPredicted RBP17.54■□□□□ 0.4
NFXL1-206ENST00000507489 P3H3Q8IVL6 736 aa17.51■□□□□ 0.39
NFXL1-206ENST00000507489 DCAF1Q9Y4B6 1507 aa17.5■□□□□ 0.39
NFXL1-206ENST00000507489 CECR2Q9BXF3 1484 aa17.5■□□□□ 0.39
NFXL1-206ENST00000507489 FAM50AQ14320 339 aaKnown RBP17.45■□□□□ 0.38
NFXL1-206ENST00000507489 PELP1Q8IZL8 1130 aaKnown RBP17.41■□□□□ 0.38
NFXL1-206ENST00000507489 NEUROD1Q13562 356 aa17.4■□□□□ 0.38
NFXL1-206ENST00000507489 GTF3C3Q9Y5Q9 886 aa17.38■□□□□ 0.37
NFXL1-206ENST00000507489 ARID3CA6NKF2 412 aa17.37■□□□□ 0.37
NFXL1-206ENST00000507489 POLR3GLQ9BT43 218 aa17.35■□□□□ 0.37
NFXL1-206ENST00000507489 RB1CC1Q8TDY2 1594 aa17.28■□□□□ 0.36
NFXL1-206ENST00000507489 ZNF316A6NFI3 1004 aaPredicted RBP17.26■□□□□ 0.35
NFXL1-206ENST00000507489 MROH2BQ7Z745 1585 aa17.19■□□□□ 0.34
NFXL1-206ENST00000507489 BCANQ96GW7 911 aa17.18■□□□□ 0.34
NFXL1-206ENST00000507489 NEFLP07196 543 aa17.16■□□□□ 0.34
NFXL1-206ENST00000507489 ACIN1Q9UKV3 1341 aaKnown RBP17.16■□□□□ 0.34
NFXL1-206ENST00000507489 PRKCSHP14314 528 aaPredicted RBP17.13■□□□□ 0.33
NFXL1-206ENST00000507489 SCAF1Q9H7N4 1312 aaKnown RBP17.13■□□□□ 0.33
NFXL1-206ENST00000507489 SOGA1O94964 1423 aa17.13■□□□□ 0.33
NFXL1-206ENST00000507489 TRIM52Q96A61 297 aa17.13■□□□□ 0.33
NFXL1-206ENST00000507489 CEP162Q5TB80 1403 aa17.12■□□□□ 0.33
NFXL1-206ENST00000507489 FBLN2P98095 1184 aa17.1■□□□□ 0.33
NFXL1-206ENST00000507489 HIRIP3Q9BW71 556 aaPredicted RBP17.08■□□□□ 0.33
NFXL1-206ENST00000507489 ABCC8Q09428 1581 aa17.08■□□□□ 0.32
NFXL1-206ENST00000507489 MIER1Q8N108 512 aa17.04■□□□□ 0.32
NFXL1-206ENST00000507489 NACADO15069 1562 aa17.04■□□□□ 0.32
NFXL1-206ENST00000507489 MYT1Q01538 1121 aa17.03■□□□□ 0.32
NFXL1-206ENST00000507489 CLIP1P30622 1438 aa17.03■□□□□ 0.32
NFXL1-206ENST00000507489 ZNF326Q5BKZ1 582 aaKnown RBP17.02■□□□□ 0.32
NFXL1-206ENST00000507489 CCDC88BA6NC98 1476 aa17.01■□□□□ 0.31
NFXL1-206ENST00000507489 WRNQ14191 1432 aaPredicted RBP eCLIP17■□□□□ 0.31
NFXL1-206ENST00000507489 WIZO95785 1651 aa16.99■□□□□ 0.31
NFXL1-206ENST00000507489 MYT1LQ9UL68 1186 aa16.98■□□□□ 0.31
NFXL1-206ENST00000507489 ERICH6Q7L0X2 663 aa16.95■□□□□ 0.3
NFXL1-206ENST00000507489 DDX10Q13206 875 aaKnown RBP16.94■□□□□ 0.3
NFXL1-206ENST00000507489 CHIC2Q9UKJ5 165 aa16.94■□□□□ 0.3
NFXL1-206ENST00000507489 BAZ1AQ9NRL2 1556 aaPredicted RBP16.91■□□□□ 0.3
NFXL1-206ENST00000507489 ZNF777Q9ULD5 760 aaPredicted RBP16.88■□□□□ 0.29
NFXL1-206ENST00000507489 TNIKQ9UKE5 1360 aa16.87■□□□□ 0.29
NFXL1-206ENST00000507489 GOLGA3Q08378 1498 aa16.86■□□□□ 0.29
NFXL1-206ENST00000507489 RUSC2Q8N2Y8 1516 aa16.86■□□□□ 0.29
NFXL1-206ENST00000507489 BAZ1BQ9UIG0 1483 aaKnown RBP16.86■□□□□ 0.29
NFXL1-206ENST00000507489 ANP32CO43423 234 aa16.81■□□□□ 0.28
NFXL1-206ENST00000507489 KANK4Q5T7N3 995 aaPredicted RBP16.79■□□□□ 0.28
NFXL1-206ENST00000507489 SENP3-EIF4A1A0A087X0R7 540 aa16.78■□□□□ 0.28
NFXL1-206ENST00000507489 SIN3AQ96ST3 1273 aa16.76■□□□□ 0.27
NFXL1-206ENST00000507489 RRP7BPQ9NSQ0 103 aa16.73■□□□□ 0.27
NFXL1-206ENST00000507489 EEA1Q15075 1411 aa16.71■□□□□ 0.27
NFXL1-206ENST00000507489 CEP164Q9UPV0 1460 aa16.7■□□□□ 0.26
NFXL1-206ENST00000507489 FKBP8Q14318 412 aa16.69■□□□□ 0.26
NFXL1-206ENST00000507489 SLC4A1APQ9BWU0 796 aaKnown RBP16.67■□□□□ 0.26
NFXL1-206ENST00000507489 TONSLQ96HA7 1378 aa16.66■□□□□ 0.26
NFXL1-206ENST00000507489 IRX6P78412 446 aaPredicted RBP16.65■□□□□ 0.26
NFXL1-206ENST00000507489 MTUS2Q5JR59 1369 aa16.64■□□□□ 0.25
NFXL1-206ENST00000507489 KIF27Q86VH2 1401 aa16.62■□□□□ 0.25
NFXL1-206ENST00000507489 HNRNPUQ00839 825 aaKnown RBP eCLIP16.61■□□□□ 0.25
NFXL1-206ENST00000507489 FAM9BQ8IZU0 186 aa16.61■□□□□ 0.25
NFXL1-206ENST00000507489 SALL2Q9Y467 1007 aaPredicted RBP16.6■□□□□ 0.25
NFXL1-206ENST00000507489 RAPGEF2Q9Y4G8 1499 aa16.57■□□□□ 0.24
NFXL1-206ENST00000507489 TOP2AP11388 1531 aaKnown RBP16.56■□□□□ 0.24
NFXL1-206ENST00000507489 CUX2O14529 1486 aa16.56■□□□□ 0.24
NFXL1-206ENST00000507489 KDM2AQ9Y2K7 1162 aa16.54■□□□□ 0.24
NFXL1-206ENST00000507489 VPS8Q8N3P4 1428 aa16.53■□□□□ 0.24
NFXL1-206ENST00000507489 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.51■□□□□ 0.231e-6■■■■□ 21.3
NFXL1-206ENST00000507489 SMARCA4P51532 1647 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms