RNA–Protein interactions for RNA: ENST00000507307.5

CANX-213, Transcript of calnexin, humanhuman

TSL 5

Gene CANX, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CANX-213ENST00000507307 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.73■□□□□ 0.271e-58■■■■■ 75
CANX-213ENST00000507307 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.47■□□□□ 0.873e-8■■■■■ 42.1
CANX-213ENST00000507307 HNRNPMP52272 730 aaKnown RBP eCLIP31.04■■■□□ 2.562e-9■■■■■ 36.1
CANX-213ENST00000507307 DDX3XO00571 662 aaKnown RBP eCLIP19.43■□□□□ 0.72e-61■■■■■ 30.2
CANX-213ENST00000507307 EFTUD2Q15029 972 aaKnown RBP eCLIP17.97■□□□□ 0.472e-7■■■■□ 24.6
CANX-213ENST00000507307 AQRO60306 1485 aaKnown RBP eCLIP35.1■■■■□ 3.213e-12■■■■□ 19.8
CANX-213ENST00000507307 HNRNPCP07910 306 aaKnown RBP eCLIP14.06□□□□□ -0.166e-6■■■■□ 19.3
CANX-213ENST00000507307 RBM22Q9NW64 420 aaKnown RBP eCLIP19.24■□□□□ 0.671e-8■■■□□ 16
CANX-213ENST00000507307 PCBP2Q15366 365 aaKnown RBP eCLIP17.81■□□□□ 0.444e-8■■■□□ 15.9
CANX-213ENST00000507307 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.2■■□□□ 1.142e-17■■■□□ 15.4
CANX-213ENST00000507307 SUB1P53999 127 aaKnown RBP eCLIP14.18□□□□□ -0.145e-18■■□□□ 13.8
CANX-213ENST00000507307 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.94■■■□□ 2.73e-31■■□□□ 13.7
CANX-213ENST00000507307 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.23■■■□□ 2.431e-26■■□□□ 13.4
CANX-213ENST00000507307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.08■■■□□ 2.413e-17■■□□□ 13.3
CANX-213ENST00000507307 RPS3P23396 243 aaKnown RBP eCLIP18.53■□□□□ 0.563e-14■■□□□ 12.5
CANX-213ENST00000507307 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.3■□□□□ 0.521e-6■■□□□ 12.4
CANX-213ENST00000507307 FXR1P51114 621 aaKnown RBP eCLIP23.39■■□□□ 1.335e-9■■□□□ 12
CANX-213ENST00000507307 PPIGQ13427 754 aaKnown RBP eCLIP22.68■■□□□ 1.226e-11■■□□□ 11.7
CANX-213ENST00000507307 FTOQ9C0B1 505 aaKnown RBP eCLIP22.42■■□□□ 1.187e-22■■□□□ 11.6
CANX-213ENST00000507307 SND1Q7KZF4 910 aaKnown RBP eCLIP19.91■□□□□ 0.782e-15■■□□□ 11.4
CANX-213ENST00000507307 YBX3P16989 372 aaKnown RBP eCLIP26.33■■□□□ 1.812e-22■□□□□ 11
CANX-213ENST00000507307 DDX6P26196 483 aaKnown RBP eCLIP20.75■□□□□ 0.916e-8■□□□□ 10.9
CANX-213ENST00000507307 NOLC1Q14978 699 aaKnown RBP eCLIP21.15■□□□□ 0.984e-22■□□□□ 10.9
CANX-213ENST00000507307 FMR1Q06787 632 aaKnown RBP eCLIP24.93■■□□□ 1.587e-17■□□□□ 10.7
CANX-213ENST00000507307 NONOQ15233 471 aaKnown RBP eCLIP21.77■■□□□ 1.088e-10■□□□□ 10.7
CANX-213ENST00000507307 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.17■□□□□ 0.59e-17■□□□□ 10.4
CANX-213ENST00000507307 FXR2P51116 673 aaKnown RBP eCLIP21.34■■□□□ 1.012e-9■□□□□ 10.3
CANX-213ENST00000507307 G3BP1Q13283 466 aaKnown RBP eCLIP23.86■■□□□ 1.414e-11■□□□□ 10.1
CANX-213ENST00000507307 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.23■□□□□ 0.999e-8■□□□□ 9.1
CANX-213ENST00000507307 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.56■■□□□ 1.849e-21■□□□□ 8.9
CANX-213ENST00000507307 FUSP35637 526 aaKnown RBP eCLIP13.16□□□□□ -0.33e-7■□□□□ 8.8
CANX-213ENST00000507307 TIAL1Q01085 375 aaKnown RBP eCLIP18.27■□□□□ 0.521e-5■□□□□ 8.6
CANX-213ENST00000507307 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.78■□□□□ 0.444e-22■□□□□ 8.2
Retrieved 33 of 33 RNA–protein pairs in 18.6 ms