RNA–Protein interactions for RNA: ENST00000507093.5

RAPGEF6-207, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAPGEF6, Length 5,742 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-207ENST00000507093 UPF1Q92900 1129 aaKnown RBP eCLIP13.09□□□□□ -0.314e-14■■■■□ 19.4
RAPGEF6-207ENST00000507093 FUBP3Q96I24 572 aaKnown RBP eCLIP12.95□□□□□ -0.342e-11■■■■■ 55.8
RAPGEF6-207ENST00000507093 EIF3HO15372 352 aaKnown RBP eCLIP13.2□□□□□ -0.32e-11■■■□□ 15.4
RAPGEF6-207ENST00000507093 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.65□□□□□ -0.227e-11■■■■■ 28.2
RAPGEF6-207ENST00000507093 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.46□□□□□ -0.739e-10■■■■■ 33.8
RAPGEF6-207ENST00000507093 EIF4G2P78344 907 aaKnown RBP eCLIP17.31■□□□□ 0.364e-9■■■■■ 36.4
RAPGEF6-207ENST00000507093 PCBP2Q15366 365 aaKnown RBP eCLIP12.61□□□□□ -0.392e-8■■■■■ 39.9
RAPGEF6-207ENST00000507093 EFTUD2Q15029 972 aaKnown RBP eCLIP13.53□□□□□ -0.242e-8■■■■■ 57.6
RAPGEF6-207ENST00000507093 U2AF2P26368 475 aaKnown RBP eCLIP14.05□□□□□ -0.163e-8■■■■□ 26.3
RAPGEF6-207ENST00000507093 KHSRPQ92945 711 aaKnown RBP eCLIP12.03□□□□□ -0.481e-7■■■■□ 20.2
RAPGEF6-207ENST00000507093 LSM11P83369 360 aaKnown RBP eCLIP11.27□□□□□ -0.611e-7■■■■■ 32.8
RAPGEF6-207ENST00000507093 AARSP49588 968 aaKnown RBP eCLIP13.5□□□□□ -0.251e-7■■■■■ 41.2
RAPGEF6-207ENST00000507093 QKIQ96PU8 341 aaKnown RBP eCLIP12.9□□□□□ -0.342e-7■■■■□ 23.6
RAPGEF6-207ENST00000507093 HNRNPLP14866 589 aaKnown RBP eCLIP12.92□□□□□ -0.342e-7■□□□□ 10
RAPGEF6-207ENST00000507093 TIA1P31483 386 aaKnown RBP eCLIP12.44□□□□□ -0.423e-7■■■■□ 24.4
RAPGEF6-207ENST00000507093 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.53□□□□□ -0.083e-7■■■■□ 20.2
RAPGEF6-207ENST00000507093 DKC1O60832 514 aaKnown RBP eCLIP14.6□□□□□ -0.074e-7■■■■■ 32.2
RAPGEF6-207ENST00000507093 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.14□□□□□ -0.314e-7■■■■□ 23.8
RAPGEF6-207ENST00000507093 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.67□□□□□ -0.065e-7■■■□□ 15.8
RAPGEF6-207ENST00000507093 PPIGQ13427 754 aaKnown RBP eCLIP13.2□□□□□ -0.36e-7■■■□□ 16.7
RAPGEF6-207ENST00000507093 SRSF1Q07955 248 aaKnown RBP eCLIP10.52□□□□□ -0.736e-7■■□□□ 12.2
RAPGEF6-207ENST00000507093 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.46□□□□□ -0.416e-7■■■□□ 16.4
RAPGEF6-207ENST00000507093 ZNF622Q969S3 477 aaKnown RBP eCLIP15.27■□□□□ 0.046e-7■■■□□ 14.8
RAPGEF6-207ENST00000507093 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.58■□□□□ 0.096e-7■■■□□ 14.6
RAPGEF6-207ENST00000507093 TAF15Q92804 592 aaKnown RBP eCLIP10.95□□□□□ -0.668e-7■■■■□ 25
RAPGEF6-207ENST00000507093 PTBP1P26599 531 aaKnown RBP eCLIP11.58□□□□□ -0.568e-7■■■■□ 19.4
RAPGEF6-207ENST00000507093 MATR3P43243 847 aaKnown RBP eCLIP15.22■□□□□ 0.031e-6■■■□□ 19.2
RAPGEF6-207ENST00000507093 SF3B4Q15427 424 aaKnown RBP eCLIP12.33□□□□□ -0.441e-6■■■□□ 15.8
RAPGEF6-207ENST00000507093 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.48■□□□□ 0.231e-6■■■■□ 23
RAPGEF6-207ENST00000507093 TARDBPQ13148 414 aaKnown RBP eCLIP12.59□□□□□ -0.391e-6■■■■□ 19.4
RAPGEF6-207ENST00000507093 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.86■□□□□ 0.451e-6■■□□□ 13.7
RAPGEF6-207ENST00000507093 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.37■□□□□ 0.052e-6■■■■■ 92.8
RAPGEF6-207ENST00000507093 HNRNPMP52272 730 aaKnown RBP eCLIP16.73■□□□□ 0.272e-6■■■■□ 22.8
RAPGEF6-207ENST00000507093 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.64□□□□□ -0.232e-6■■■□□ 16.8
RAPGEF6-207ENST00000507093 AQRO60306 1485 aaKnown RBP eCLIP16.29■□□□□ 0.22e-6■■■□□ 18.6
RAPGEF6-207ENST00000507093 SF3B1O75533 1304 aaKnown RBP eCLIP13.33□□□□□ -0.283e-6■■■■■ 100.3
RAPGEF6-207ENST00000507093 FXR2P51116 673 aaKnown RBP eCLIP13.64□□□□□ -0.234e-6■■■□□ 18.9
RAPGEF6-207ENST00000507093 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.98□□□□□ -0.335e-6■■■□□ 19.1
RAPGEF6-207ENST00000507093 NONOQ15233 471 aaKnown RBP eCLIP14.55□□□□□ -0.085e-6■■■■□ 19.7
RAPGEF6-207ENST00000507093 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.63□□□□□ -0.397e-6■■□□□ 14.4
RAPGEF6-207ENST00000507093 HLTFQ14527 1009 aaKnown RBP eCLIP14.67□□□□□ -0.069e-6■□□□□ 9.4
Retrieved 41 of 41 RNA–protein pairs in 9.4 ms