RNA–Protein interactions for RNA: ENST00000506614.1

CCNI-204, Transcript of cyclin I, humanhuman

TSL 2

Gene CCNI, Length 525 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI-204ENST00000506614 AEBP2Q6ZN18 517 aaPredicted RBP22.36■■□□□ 1.17
CCNI-204ENST00000506614 CHIC1Q5VXU3 224 aa21.25■□□□□ 0.99
CCNI-204ENST00000506614 SENP3Q9H4L4 574 aaPredicted RBP19.01■□□□□ 0.63
CCNI-204ENST00000506614 PHF23Q9BUL5 403 aaPredicted RBP18.82■□□□□ 0.6
CCNI-204ENST00000506614 FOXD1Q16676 465 aa17.75■□□□□ 0.43
CCNI-204ENST00000506614 PLPPR3Q6T4P5 718 aa17.02■□□□□ 0.32
CCNI-204ENST00000506614 PPP6R1Q9UPN7 881 aa16.68■□□□□ 0.26
CCNI-204ENST00000506614 ADRA2BP18089 450 aa16.67■□□□□ 0.26
CCNI-204ENST00000506614 PIAS4Q8N2W9 510 aaPredicted RBP16.65■□□□□ 0.26
CCNI-204ENST00000506614 POTEDQ86YR6 584 aa16.59■□□□□ 0.25
CCNI-204ENST00000506614 MSH5O43196 834 aa16.53■□□□□ 0.24
CCNI-204ENST00000506614 MAPK8IP2Q13387 824 aaPredicted RBP15.31■□□□□ 0.04
CCNI-204ENST00000506614 SCAF1Q9H7N4 1312 aaKnown RBP15.16■□□□□ 0.02
CCNI-204ENST00000506614 DMRT2Q9Y5R5 561 aa15.08■□□□□ 0
CCNI-204ENST00000506614 PPP4R3CPQ6ZMV5 832 aa14.97□□□□□ -0.01
CCNI-204ENST00000506614 DCAF8L1A6NGE4 600 aa14.66□□□□□ -0.06
CCNI-204ENST00000506614 CNKSR2Q8WXI2 1034 aa14.62□□□□□ -0.07
CCNI-204ENST00000506614 HOXD11P31277 338 aaPredicted RBP14.51□□□□□ -0.09
CCNI-204ENST00000506614 RNF216Q9NWF9 866 aaPredicted RBP14.45□□□□□ -0.1
CCNI-204ENST00000506614 NCBP3Q53F19 620 aaKnown RBP14.39□□□□□ -0.11
CCNI-204ENST00000506614 CACNB1Q02641 598 aaPredicted RBP14.28□□□□□ -0.12
CCNI-204ENST00000506614 NPM3O75607 178 aaKnown RBP14.21□□□□□ -0.13
CCNI-204ENST00000506614 RNF39Q9H2S5 420 aa14.12□□□□□ -0.15
CCNI-204ENST00000506614 KCNA4P22459 653 aa14.04□□□□□ -0.16
CCNI-204ENST00000506614 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.98□□□□□ -0.17
CCNI-204ENST00000506614 C1QBPQ07021 282 aaKnown RBP13.9□□□□□ -0.18
CCNI-204ENST00000506614 DNAJC5BQ9UF47 199 aa13.87□□□□□ -0.19
CCNI-204ENST00000506614 U3KPZ7 1027 aaPredicted RBP13.63□□□□□ -0.23
CCNI-204ENST00000506614 SLC4A2P04920 1241 aa13.54□□□□□ -0.24
CCNI-204ENST00000506614 CAPN15O75808 1086 aa13.47□□□□□ -0.25
CCNI-204ENST00000506614 SPINK5Q9NQ38 1064 aaPredicted RBP13.47□□□□□ -0.25
CCNI-204ENST00000506614 TRHP20396 242 aaPredicted RBP13.29□□□□□ -0.28
CCNI-204ENST00000506614 DSG3P32926 999 aa13.27□□□□□ -0.29
CCNI-204ENST00000506614 SLC4A1APQ9BWU0 796 aaKnown RBP13.27□□□□□ -0.29
CCNI-204ENST00000506614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.21□□□□□ -0.29
CCNI-204ENST00000506614 HNRNPUL2Q1KMD3 747 aaKnown RBP13.21□□□□□ -0.29
CCNI-204ENST00000506614 ABCB7O75027 752 aa13.2□□□□□ -0.3
CCNI-204ENST00000506614 APLP2Q06481 763 aa13.2□□□□□ -0.3
CCNI-204ENST00000506614 SAMD1Q6SPF0 538 aaPredicted RBP13.16□□□□□ -0.3
CCNI-204ENST00000506614 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
CCNI-204ENST00000506614 MYCNP04198 464 aaPredicted RBP13.11□□□□□ -0.31
CCNI-204ENST00000506614 FOXD4L1Q9NU39 408 aa13.03□□□□□ -0.32
CCNI-204ENST00000506614 POTEHQ6S545 545 aa12.92□□□□□ -0.34
CCNI-204ENST00000506614 ZBTB22O15209 634 aa12.9□□□□□ -0.34
CCNI-204ENST00000506614 POLA2Q14181 598 aa12.89□□□□□ -0.35
CCNI-204ENST00000506614 ATF5Q9Y2D1 282 aaPredicted RBP12.87□□□□□ -0.35
CCNI-204ENST00000506614 RBM42Q9BTD8 480 aaKnown RBP12.64□□□□□ -0.39
CCNI-204ENST00000506614 ZBTB12Q9Y330 459 aaPredicted RBP12.54□□□□□ -0.4
CCNI-204ENST00000506614 ATXN8OSP0DMR3 200 aa12.53□□□□□ -0.4
CCNI-204ENST00000506614 OSCARQ8IYS5 282 aa12.5□□□□□ -0.41
CCNI-204ENST00000506614 CHRDL2Q6WN34 429 aa12.38□□□□□ -0.43
CCNI-204ENST00000506614 EHMT2Q96KQ7 1210 aa12.38□□□□□ -0.43
CCNI-204ENST00000506614 AKT1S1Q96B36 256 aa12.36□□□□□ -0.43
CCNI-204ENST00000506614 CSRNP3Q8WYN3 585 aa12.35□□□□□ -0.43
CCNI-204ENST00000506614 FBLN2P98095 1184 aa12.34□□□□□ -0.43
CCNI-204ENST00000506614 REM2Q8IYK8 340 aaPredicted RBP12.29□□□□□ -0.44
CCNI-204ENST00000506614 MKRN4PQ13434 485 aaPredicted RBP12.24□□□□□ -0.45
CCNI-204ENST00000506614 PITPNM1O00562 1244 aa12.18□□□□□ -0.46
CCNI-204ENST00000506614 SPDYE2BA6NHP3 402 aa12.17□□□□□ -0.46
CCNI-204ENST00000506614 SPDYE6P0CI01 402 aa12.17□□□□□ -0.46
CCNI-204ENST00000506614 SPDYE2Q495Y8 402 aa12.17□□□□□ -0.46
CCNI-204ENST00000506614 ZNF692Q9BU19 519 aaPredicted RBP12.12□□□□□ -0.47
CCNI-204ENST00000506614 PIP4P2Q8N4L2 257 aa12.11□□□□□ -0.47
CCNI-204ENST00000506614 CLEC11AQ9Y240 323 aa12.07□□□□□ -0.48
CCNI-204ENST00000506614 SSUH2Q9Y2M2 353 aa12.01□□□□□ -0.49
CCNI-204ENST00000506614 FXR2P51116 673 aaKnown RBP eCLIP11.99□□□□□ -0.49
CCNI-204ENST00000506614 SPDYE1Q8NFV5 336 aaPredicted RBP11.97□□□□□ -0.49
CCNI-204ENST00000506614 SP7Q8TDD2 431 aaPredicted RBP11.97□□□□□ -0.49
CCNI-204ENST00000506614 PABPN1Q86U42 306 aaKnown RBP eCLIP11.95□□□□□ -0.5
CCNI-204ENST00000506614 HAX1O00165 279 aa11.93□□□□□ -0.5
CCNI-204ENST00000506614 PRKAR2AP13861 404 aaKnown RBP11.89□□□□□ -0.51
CCNI-204ENST00000506614 CHADLQ6NUI6 762 aa11.82□□□□□ -0.52
CCNI-204ENST00000506614 PRR29P0C7W0 189 aa11.81□□□□□ -0.52
CCNI-204ENST00000506614 EVX2Q03828 476 aa11.76□□□□□ -0.53
CCNI-204ENST00000506614 SPDYE4A6NLX3 237 aa11.73□□□□□ -0.53
CCNI-204ENST00000506614 C19orf67A6NJJ6 358 aa11.61□□□□□ -0.55
CCNI-204ENST00000506614 FARP1Q9Y4F1 1045 aaPredicted RBP11.57□□□□□ -0.56
CCNI-204ENST00000506614 STAG3Q9UJ98 1225 aa11.55□□□□□ -0.56
CCNI-204ENST00000506614 CD44P16070 742 aaKnown RBP11.51□□□□□ -0.57
CCNI-204ENST00000506614 CREBZFQ9NS37 354 aa11.5□□□□□ -0.57
CCNI-204ENST00000506614 GABBR2O75899 941 aa11.47□□□□□ -0.57
CCNI-204ENST00000506614 ZRANB1Q9UGI0 708 aa11.38□□□□□ -0.59
CCNI-204ENST00000506614 PROM2Q8N271 834 aa11.32□□□□□ -0.6
CCNI-204ENST00000506614 NPM1P06748 294 aaKnown RBP eCLIP11.29□□□□□ -0.6
CCNI-204ENST00000506614 FKBP8Q14318 412 aa11.28□□□□□ -0.6
CCNI-204ENST00000506614 PAK3O75914 559 aaPredicted RBP11.27□□□□□ -0.61
CCNI-204ENST00000506614 MNX1P50219 401 aaPredicted RBP11.26□□□□□ -0.61
CCNI-204ENST00000506614 ZNF579Q8NAF0 562 aaKnown RBP11.26□□□□□ -0.61
CCNI-204ENST00000506614 PHF12Q96QT6 1004 aa11.25□□□□□ -0.61
CCNI-204ENST00000506614 POTEIP0CG38 1075 aa11.22□□□□□ -0.61
CCNI-204ENST00000506614 MIER1Q8N108 512 aa11.22□□□□□ -0.61
CCNI-204ENST00000506614 DCBLD2Q96PD2 775 aa11.22□□□□□ -0.61
CCNI-204ENST00000506614 LHX8Q68G74 356 aa11.21□□□□□ -0.61
CCNI-204ENST00000506614 GALR2O43603 387 aaPredicted RBP11.2□□□□□ -0.62
CCNI-204ENST00000506614 TSPYL2Q9H2G4 693 aaPredicted RBP11.19□□□□□ -0.62
CCNI-204ENST00000506614 PLEKHG5O94827 1062 aa11.17□□□□□ -0.62
CCNI-204ENST00000506614 CLCN6P51797 869 aa11.16□□□□□ -0.62
CCNI-204ENST00000506614 PLCD3Q8N3E9 789 aa11.16□□□□□ -0.62
CCNI-204ENST00000506614 MS4A3Q96HJ5 214 aa11.07□□□□□ -0.64
CCNI-204ENST00000506614 RASEFQ8IZ41 740 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms