RNA–Protein interactions for RNA: ENST00000506587.5

PGM3-205, Transcript of phosphoglucomutase 3, humanhuman

TSL 2 BASIC

Gene PGM3, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGM3-205ENST00000506587 U2AF1Q01081 240 aaKnown RBP eCLIP13.45□□□□□ -0.262e-16■■■■■ 53.7
PGM3-205ENST00000506587 G3BP1Q13283 466 aaKnown RBP eCLIP12.49□□□□□ -0.412e-11■■■■■ 39.5
PGM3-205ENST00000506587 U2AF2P26368 475 aaKnown RBP eCLIP11.71□□□□□ -0.535e-7■■■■■ 37.6
PGM3-205ENST00000506587 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.1□□□□□ -1.111e-6■■■■□ 25.3
PGM3-205ENST00000506587 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.19□□□□□ -0.788e-7■■■■□ 24.9
PGM3-205ENST00000506587 GPKOWQ92917 476 aaPredicted RBP eCLIP11.7□□□□□ -0.543e-8■■■■□ 21
PGM3-205ENST00000506587 HNRNPKP61978 463 aaKnown RBP eCLIP9.68□□□□□ -0.864e-6■■■■□ 20.4
PGM3-205ENST00000506587 ZRANB2O95218 330 aaKnown RBP eCLIP10.63□□□□□ -0.715e-7■■■■□ 19.7
PGM3-205ENST00000506587 MATR3P43243 847 aaKnown RBP eCLIP11.03□□□□□ -0.641e-9■■■■□ 19.4
PGM3-205ENST00000506587 PABPC4Q13310 644 aaKnown RBP eCLIP11.34□□□□□ -0.592e-7■■■■□ 19.3
PGM3-205ENST00000506587 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.16□□□□□ -0.463e-6■■■□□ 15.2
PGM3-205ENST00000506587 SF3B4Q15427 424 aaKnown RBP eCLIP8.79□□□□□ -12e-16■■■□□ 14.8
PGM3-205ENST00000506587 RPS3P23396 243 aaKnown RBP eCLIP10.03□□□□□ -0.85e-8■■■□□ 14.8
PGM3-205ENST00000506587 YBX3P16989 372 aaKnown RBP eCLIP11.76□□□□□ -0.535e-6■■□□□ 13.8
PGM3-205ENST00000506587 KHSRPQ92945 711 aaKnown RBP eCLIP10.67□□□□□ -0.74e-7■■□□□ 13.1
PGM3-205ENST00000506587 SF3A3Q12874 501 aaKnown RBP eCLIP10.14□□□□□ -0.793e-8■■□□□ 13.1
PGM3-205ENST00000506587 ZNF622Q969S3 477 aaKnown RBP eCLIP12.13□□□□□ -0.474e-8■■□□□ 12.8
PGM3-205ENST00000506587 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.98□□□□□ -0.332e-6■■□□□ 12.7
PGM3-205ENST00000506587 PPIGQ13427 754 aaKnown RBP eCLIP10.54□□□□□ -0.722e-7■■□□□ 12.3
PGM3-205ENST00000506587 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.23□□□□□ -0.619e-6■□□□□ 11.3
PGM3-205ENST00000506587 SMNDC1O75940 238 aaKnown RBP eCLIP9.32□□□□□ -0.923e-9■□□□□ 10.6
PGM3-205ENST00000506587 AQRO60306 1485 aaKnown RBP eCLIP16.17■□□□□ 0.189e-6■□□□□ 10.2
PGM3-205ENST00000506587 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.68□□□□□ -0.77e-9■□□□□ 10.1
PGM3-205ENST00000506587 HNRNPLP14866 589 aaKnown RBP eCLIP10.05□□□□□ -0.88e-7■□□□□ 9.3
PGM3-205ENST00000506587 PTBP1P26599 531 aaKnown RBP eCLIP8.75□□□□□ -1.011e-7■□□□□ 8.8
PGM3-205ENST00000506587 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.7□□□□□ -0.063e-6■□□□□ 8.7
Retrieved 26 of 26 RNA–protein pairs in 5.8 ms