RNA–Protein interactions for RNA: ENST00000506491.5

KLHL3-207, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-207ENST00000506491 DCAF8L2P0C7V8 631 aa19.27■□□□□ 0.68
KLHL3-207ENST00000506491 SUPT5HO00267 1087 aaKnown RBP18.04■□□□□ 0.48
KLHL3-207ENST00000506491 PELP1Q8IZL8 1130 aaKnown RBP17.92■□□□□ 0.46
KLHL3-207ENST00000506491 EHMT2Q96KQ7 1210 aa17.92■□□□□ 0.46
KLHL3-207ENST00000506491 APLP2Q06481 763 aa17.6■□□□□ 0.41
KLHL3-207ENST00000506491 SHROOM4Q9ULL8 1493 aa17.58■□□□□ 0.4
KLHL3-207ENST00000506491 FAM9AQ8IZU1 332 aaPredicted RBP17.48■□□□□ 0.39
KLHL3-207ENST00000506491 ERICH6Q7L0X2 663 aa17.32■□□□□ 0.36
KLHL3-207ENST00000506491 TTBK1Q5TCY1 1321 aaPredicted RBP17.31■□□□□ 0.36
KLHL3-207ENST00000506491 CCER1Q8TC90 406 aaPredicted RBP17.14■□□□□ 0.33
KLHL3-207ENST00000506491 RANGAP1P46060 587 aaPredicted RBP17.12■□□□□ 0.33
KLHL3-207ENST00000506491 ATP1B4Q9UN42 357 aaPredicted RBP17.07■□□□□ 0.32
KLHL3-207ENST00000506491 PCGF6Q9BYE7 350 aa17.02■□□□□ 0.32
KLHL3-207ENST00000506491 CENPBP07199 599 aaPredicted RBP16.93■□□□□ 0.3
KLHL3-207ENST00000506491 NISCHQ9Y2I1 1504 aa16.89■□□□□ 0.29
KLHL3-207ENST00000506491 NEFLP07196 543 aa16.79■□□□□ 0.28
KLHL3-207ENST00000506491 ZEB1P37275 1124 aaPredicted RBP16.68■□□□□ 0.26
KLHL3-207ENST00000506491 YTHDC1Q96MU7 727 aaKnown RBP16.67■□□□□ 0.26
KLHL3-207ENST00000506491 UBTFP17480 764 aaKnown RBP16.66■□□□□ 0.26
KLHL3-207ENST00000506491 TRIM41Q8WV44 630 aa16.64■□□□□ 0.25
KLHL3-207ENST00000506491 MYT1LQ9UL68 1186 aa16.61■□□□□ 0.25
KLHL3-207ENST00000506491 DAXXQ9UER7 740 aaPredicted RBP16.55■□□□□ 0.24
KLHL3-207ENST00000506491 MYT1Q01538 1121 aa16.54■□□□□ 0.24
KLHL3-207ENST00000506491 POLR3GLQ9BT43 218 aa16.49■□□□□ 0.23
KLHL3-207ENST00000506491 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.4■□□□□ 0.22
KLHL3-207ENST00000506491 HNRNPUL2Q1KMD3 747 aaKnown RBP16.4■□□□□ 0.22
KLHL3-207ENST00000506491 CHIC1Q5VXU3 224 aa16.38■□□□□ 0.21
KLHL3-207ENST00000506491 PPARGC1BQ86YN6 1023 aaKnown RBP16.37■□□□□ 0.21
KLHL3-207ENST00000506491 CNGB1Q14028 1251 aaPredicted RBP16.32■□□□□ 0.2
KLHL3-207ENST00000506491 SLC4A1APQ9BWU0 796 aaKnown RBP16.31■□□□□ 0.2
KLHL3-207ENST00000506491 ITGAEP38570 1179 aa16.3■□□□□ 0.2
KLHL3-207ENST00000506491 ZNF316A6NFI3 1004 aaPredicted RBP16.12■□□□□ 0.17
KLHL3-207ENST00000506491 CLSPNQ9HAW4 1339 aa16.12■□□□□ 0.17
KLHL3-207ENST00000506491 HRCP23327 699 aa16.04■□□□□ 0.16
KLHL3-207ENST00000506491 TRIM26Q12899 539 aaPredicted RBP15.99■□□□□ 0.15
KLHL3-207ENST00000506491 RTL5Q5HYW3 569 aaPredicted RBP15.99■□□□□ 0.15
KLHL3-207ENST00000506491 SLC24A1O60721 1099 aa15.85■□□□□ 0.13
KLHL3-207ENST00000506491 ZBTB47Q9UFB7 747 aaPredicted RBP15.85■□□□□ 0.13
KLHL3-207ENST00000506491 TRIM52Q96A61 297 aa15.81■□□□□ 0.12
KLHL3-207ENST00000506491 FAM50AQ14320 339 aaKnown RBP15.8■□□□□ 0.12
KLHL3-207ENST00000506491 BCL11AQ9H165 835 aa15.79■□□□□ 0.12
KLHL3-207ENST00000506491 BCANQ96GW7 911 aa15.7■□□□□ 0.1
KLHL3-207ENST00000506491 ZNF326Q5BKZ1 582 aaKnown RBP15.7■□□□□ 0.1
KLHL3-207ENST00000506491 NEUROD1Q13562 356 aa15.69■□□□□ 0.1
KLHL3-207ENST00000506491 LOC105371045A0A1W2PR82 267 aa15.69■□□□□ 0.1
KLHL3-207ENST00000506491 CANXP27824 592 aaKnown RBP15.66■□□□□ 0.1
KLHL3-207ENST00000506491 DIEXFQ68CQ4 756 aaKnown RBP15.63■□□□□ 0.09
KLHL3-207ENST00000506491 NEFMP07197 916 aa15.6■□□□□ 0.09
KLHL3-207ENST00000506491 GTF3C3Q9Y5Q9 886 aa15.58■□□□□ 0.08
KLHL3-207ENST00000506491 FBLN2P98095 1184 aa15.55■□□□□ 0.08
KLHL3-207ENST00000506491 CDK11AQ9UQ88 783 aaPredicted RBP15.55■□□□□ 0.08
KLHL3-207ENST00000506491 ANP32CO43423 234 aa15.54■□□□□ 0.08
KLHL3-207ENST00000506491 PLPPR3Q6T4P5 718 aa15.39■□□□□ 0.05
KLHL3-207ENST00000506491 ESF1Q9H501 851 aaKnown RBP15.37■□□□□ 0.05
KLHL3-207ENST00000506491 ARID3CA6NKF2 412 aa15.37■□□□□ 0.05
KLHL3-207ENST00000506491 NPM2Q86SE8 214 aaKnown RBP15.35■□□□□ 0.05
KLHL3-207ENST00000506491 PABPN1Q86U42 306 aaKnown RBP eCLIP15.34■□□□□ 0.05
KLHL3-207ENST00000506491 ANP32AP39687 249 aaKnown RBP15.33■□□□□ 0.05
KLHL3-207ENST00000506491 ANP32BQ92688 251 aaKnown RBP15.32■□□□□ 0.04
KLHL3-207ENST00000506491 HSP90AA1P07900 732 aaKnown RBP15.31■□□□□ 0.04
KLHL3-207ENST00000506491 ZNF777Q9ULD5 760 aaPredicted RBP15.31■□□□□ 0.04
KLHL3-207ENST00000506491 STAG3Q9UJ98 1225 aa15.3■□□□□ 0.04
KLHL3-207ENST00000506491 CHGAP10645 457 aaKnown RBP15.26■□□□□ 0.03
KLHL3-207ENST00000506491 P3H3Q8IVL6 736 aa15.26■□□□□ 0.03
KLHL3-207ENST00000506491 ACIN1Q9UKV3 1341 aaKnown RBP15.22■□□□□ 0.03
KLHL3-207ENST00000506491 EIF5BO60841 1220 aaKnown RBP15.18■□□□□ 0.02
KLHL3-207ENST00000506491 UPF2Q9HAU5 1272 aaKnown RBP15.18■□□□□ 0.02
KLHL3-207ENST00000506491 SCAF1Q9H7N4 1312 aaKnown RBP15.17■□□□□ 0.02
KLHL3-207ENST00000506491 A0A0G2JS52 829 aa15.15■□□□□ 0.02
KLHL3-207ENST00000506491 CDK11BP21127 795 aaKnown RBP15.13■□□□□ 0.01
KLHL3-207ENST00000506491 ABCC9O60706 1549 aa15.1■□□□□ 0.01
KLHL3-207ENST00000506491 SALL2Q9Y467 1007 aaPredicted RBP15.08■□□□□ 0
KLHL3-207ENST00000506491 NPM1P06748 294 aaKnown RBP eCLIP15.06■□□□□ 0
KLHL3-207ENST00000506491 ARXQ96QS3 562 aa15.04■□□□□ -0
KLHL3-207ENST00000506491 ZBTB7CA1YPR0 619 aa15.03■□□□□ -0
KLHL3-207ENST00000506491 FAM9BQ8IZU0 186 aa15.02■□□□□ -0
KLHL3-207ENST00000506491 FKBP8Q14318 412 aa15.02□□□□□ -0.01
KLHL3-207ENST00000506491 PLEKHG5O94827 1062 aa15□□□□□ -0.01
KLHL3-207ENST00000506491 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15□□□□□ -0.01
KLHL3-207ENST00000506491 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.99□□□□□ -0.01
KLHL3-207ENST00000506491 TONSLQ96HA7 1378 aa14.99□□□□□ -0.01
KLHL3-207ENST00000506491 HNRNPUQ00839 825 aaKnown RBP eCLIP14.98□□□□□ -0.01
KLHL3-207ENST00000506491 WDR43Q15061 677 aaKnown RBP eCLIP14.96□□□□□ -0.01
KLHL3-207ENST00000506491 GLIPR1L2Q4G1C9 344 aa14.96□□□□□ -0.01
KLHL3-207ENST00000506491 MYH16Q9H6N6 1097 aa14.94□□□□□ -0.02
KLHL3-207ENST00000506491 C14orf37Q86TY3 774 aa14.94□□□□□ -0.02
KLHL3-207ENST00000506491 NBR1Q14596 966 aa14.92□□□□□ -0.02
KLHL3-207ENST00000506491 TMC1Q8TDI8 760 aa14.92□□□□□ -0.02
KLHL3-207ENST00000506491 SENP3Q9H4L4 574 aaPredicted RBP14.9□□□□□ -0.02
KLHL3-207ENST00000506491 CCDC136Q96JN2 1154 aa14.9□□□□□ -0.02
KLHL3-207ENST00000506491 TULP1O00294 542 aaPredicted RBP14.89□□□□□ -0.03
KLHL3-207ENST00000506491 KDM2AQ9Y2K7 1162 aa14.87□□□□□ -0.03
KLHL3-207ENST00000506491 DDX10Q13206 875 aaKnown RBP14.87□□□□□ -0.03
KLHL3-207ENST00000506491 CHIC2Q9UKJ5 165 aa14.86□□□□□ -0.03
KLHL3-207ENST00000506491 HAP1P54257 671 aaPredicted RBP14.84□□□□□ -0.03
KLHL3-207ENST00000506491 CSRNP3Q8WYN3 585 aa14.84□□□□□ -0.03
KLHL3-207ENST00000506491 NCLP19338 710 aaKnown RBP14.83□□□□□ -0.03
KLHL3-207ENST00000506491 PPP1R15AO75807 674 aaPredicted RBP14.8□□□□□ -0.04
KLHL3-207ENST00000506491 MRS2Q9HD23 443 aa14.76□□□□□ -0.05
KLHL3-207ENST00000506491 TSPY4P0CV99 314 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms