RNA–Protein interactions for RNA: ENST00000506488.5

MIB2-220, Transcript of mindbomb E3 ubiquitin protein ligase 2, humanhuman

TSL 5

Gene MIB2, Length 2,997 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIB2-220ENST00000506488 NISCHQ9Y2I1 1504 aa33.33■■■□□ 2.93
MIB2-220ENST00000506488 HRCP23327 699 aa29.29■■■□□ 2.28
MIB2-220ENST00000506488 SHROOM4Q9ULL8 1493 aa29.21■■■□□ 2.27
MIB2-220ENST00000506488 SUPT5HO00267 1087 aaKnown RBP29.07■■■□□ 2.24
MIB2-220ENST00000506488 MYO15BQ96JP2 1530 aa28.74■■■□□ 2.19
MIB2-220ENST00000506488 PCGF6Q9BYE7 350 aa28.7■■■□□ 2.19
MIB2-220ENST00000506488 CHIC1Q5VXU3 224 aa28.65■■■□□ 2.18
MIB2-220ENST00000506488 PPARGC1BQ86YN6 1023 aaKnown RBP28.56■■■□□ 2.16
MIB2-220ENST00000506488 ZCCHC6Q5VYS8 1495 aaKnown RBP28.35■■■□□ 2.13
MIB2-220ENST00000506488 DCAF1Q9Y4B6 1507 aa28.22■■■□□ 2.11
MIB2-220ENST00000506488 PELP1Q8IZL8 1130 aaKnown RBP28.08■■■□□ 2.09
MIB2-220ENST00000506488 TRIM26Q12899 539 aaPredicted RBP27.91■■■□□ 2.06
MIB2-220ENST00000506488 LOC105371045A0A1W2PR82 267 aa27.89■■■□□ 2.05
MIB2-220ENST00000506488 CCDC180Q9P1Z9 1646 aa27.83■■■□□ 2.05
MIB2-220ENST00000506488 ZEB1P37275 1124 aaPredicted RBP27.69■■■□□ 2.02
MIB2-220ENST00000506488 DCAF8L2P0C7V8 631 aa27.63■■■□□ 2.01
MIB2-220ENST00000506488 SCAF1Q9H7N4 1312 aaKnown RBP27.56■■■□□ 2
MIB2-220ENST00000506488 ACIN1Q9UKV3 1341 aaKnown RBP26.99■■□□□ 1.91
MIB2-220ENST00000506488 TRIM41Q8WV44 630 aa26.98■■□□□ 1.91
MIB2-220ENST00000506488 MYT1Q01538 1121 aa26.96■■□□□ 1.91
MIB2-220ENST00000506488 ABCC9O60706 1549 aa26.91■■□□□ 1.9
MIB2-220ENST00000506488 NEUROD1Q13562 356 aa26.88■■□□□ 1.89
MIB2-220ENST00000506488 FAM9AQ8IZU1 332 aaPredicted RBP26.85■■□□□ 1.89
MIB2-220ENST00000506488 RSF1Q96T23 1441 aaPredicted RBP26.76■■□□□ 1.87
MIB2-220ENST00000506488 GTF3C3Q9Y5Q9 886 aa26.72■■□□□ 1.87
MIB2-220ENST00000506488 CENPBP07199 599 aaPredicted RBP26.7■■□□□ 1.86
MIB2-220ENST00000506488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.65■■□□□ 1.86
MIB2-220ENST00000506488 CCER1Q8TC90 406 aaPredicted RBP26.64■■□□□ 1.86
MIB2-220ENST00000506488 EHMT2Q96KQ7 1210 aa26.64■■□□□ 1.86
MIB2-220ENST00000506488 DIEXFQ68CQ4 756 aaKnown RBP26.61■■□□□ 1.85
MIB2-220ENST00000506488 RB1CC1Q8TDY2 1594 aa26.6■■□□□ 1.85
MIB2-220ENST00000506488 SCRIBQ14160 1630 aa26.36■■□□□ 1.81
MIB2-220ENST00000506488 ZNF316A6NFI3 1004 aaPredicted RBP26.16■■□□□ 1.78
MIB2-220ENST00000506488 WRNQ14191 1432 aaPredicted RBP eCLIP26.09■■□□□ 1.77
MIB2-220ENST00000506488 YTHDC1Q96MU7 727 aaKnown RBP26.06■■□□□ 1.76
MIB2-220ENST00000506488 TTBK1Q5TCY1 1321 aaPredicted RBP26.01■■□□□ 1.75
MIB2-220ENST00000506488 CECR2Q9BXF3 1484 aa26.01■■□□□ 1.75
MIB2-220ENST00000506488 MROH2BQ7Z745 1585 aa25.99■■□□□ 1.75
MIB2-220ENST00000506488 MIER1Q8N108 512 aa25.92■■□□□ 1.74
MIB2-220ENST00000506488 CEP162Q5TB80 1403 aa25.91■■□□□ 1.74
MIB2-220ENST00000506488 WIZO95785 1651 aa25.89■■□□□ 1.73
MIB2-220ENST00000506488 EIF4G1Q04637 1599 aaKnown RBP25.87■■□□□ 1.73
MIB2-220ENST00000506488 TNIKQ9UKE5 1360 aa25.79■■□□□ 1.72
MIB2-220ENST00000506488 BAZ1AQ9NRL2 1556 aaPredicted RBP25.76■■□□□ 1.71
MIB2-220ENST00000506488 CCDC88BA6NC98 1476 aa25.72■■□□□ 1.71
MIB2-220ENST00000506488 ABCC8Q09428 1581 aa25.66■■□□□ 1.7
MIB2-220ENST00000506488 SOGA1O94964 1423 aa25.62■■□□□ 1.69
MIB2-220ENST00000506488 UBTFP17480 764 aaKnown RBP25.59■■□□□ 1.69
MIB2-220ENST00000506488 CLSPNQ9HAW4 1339 aa25.59■■□□□ 1.69
MIB2-220ENST00000506488 EEA1Q15075 1411 aa25.57■■□□□ 1.68
MIB2-220ENST00000506488 NACADO15069 1562 aa25.57■■□□□ 1.68
MIB2-220ENST00000506488 CSRNP3Q8WYN3 585 aa25.57■■□□□ 1.68
MIB2-220ENST00000506488 HNRNPUL2Q1KMD3 747 aaKnown RBP25.56■■□□□ 1.68
MIB2-220ENST00000506488 SUPT16HQ9Y5B9 1047 aaKnown RBP25.5■■□□□ 1.67
MIB2-220ENST00000506488 GOLGA3Q08378 1498 aa25.47■■□□□ 1.67
MIB2-220ENST00000506488 TOP2AP11388 1531 aaKnown RBP25.45■■□□□ 1.66
MIB2-220ENST00000506488 RUSC2Q8N2Y8 1516 aa25.45■■□□□ 1.66
MIB2-220ENST00000506488 SMARCA2P51531 1590 aa25.36■■□□□ 1.65
MIB2-220ENST00000506488 ANP32EQ9BTT0 268 aa25.34■■□□□ 1.65
MIB2-220ENST00000506488 TSHZ2Q9NRE2 1034 aa25.34■■□□□ 1.65
MIB2-220ENST00000506488 PABPN1Q86U42 306 aaKnown RBP eCLIP25.3■■□□□ 1.641e-6■■□□□ 11.7
MIB2-220ENST00000506488 CLIP1P30622 1438 aa25.24■■□□□ 1.63
MIB2-220ENST00000506488 VPS8Q8N3P4 1428 aa25.23■■□□□ 1.63
MIB2-220ENST00000506488 CEP164Q9UPV0 1460 aa25.23■■□□□ 1.63
MIB2-220ENST00000506488 APLP2Q06481 763 aa25.22■■□□□ 1.63
MIB2-220ENST00000506488 SMARCA4P51532 1647 aa25.19■■□□□ 1.62
MIB2-220ENST00000506488 KIF21BO75037 1637 aa25.16■■□□□ 1.62
MIB2-220ENST00000506488 DHX57Q6P158 1386 aaKnown RBP25.14■■□□□ 1.62
MIB2-220ENST00000506488 BCL11AQ9H165 835 aa25.12■■□□□ 1.61
MIB2-220ENST00000506488 BAZ1BQ9UIG0 1483 aaKnown RBP25.04■■□□□ 1.6
MIB2-220ENST00000506488 RAPGEF2Q9Y4G8 1499 aa24.94■■□□□ 1.58
MIB2-220ENST00000506488 SYNJ1O43426 1573 aa24.93■■□□□ 1.58
MIB2-220ENST00000506488 RANGAP1P46060 587 aaPredicted RBP24.9■■□□□ 1.58
MIB2-220ENST00000506488 BCANQ96GW7 911 aa24.89■■□□□ 1.58
MIB2-220ENST00000506488 KCNH8Q96L42 1107 aa24.89■■□□□ 1.57
MIB2-220ENST00000506488 FKBP8Q14318 412 aa24.84■■□□□ 1.57
MIB2-220ENST00000506488 RRBP1Q9P2E9 1410 aaKnown RBP24.77■■□□□ 1.56
MIB2-220ENST00000506488 RBM19Q9Y4C8 960 aaKnown RBP24.77■■□□□ 1.56
MIB2-220ENST00000506488 CUX2O14529 1486 aa24.77■■□□□ 1.56
MIB2-220ENST00000506488 KANK4Q5T7N3 995 aaPredicted RBP24.76■■□□□ 1.55
MIB2-220ENST00000506488 ARAP1Q96P48 1450 aa24.7■■□□□ 1.54
MIB2-220ENST00000506488 NEFLP07196 543 aa24.69■■□□□ 1.54
MIB2-220ENST00000506488 CCNB3Q8WWL7 1395 aa24.64■■□□□ 1.54
MIB2-220ENST00000506488 UNC13AQ9UPW8 1703 aa24.63■■□□□ 1.53
MIB2-220ENST00000506488 DDX10Q13206 875 aaKnown RBP24.62■■□□□ 1.53
MIB2-220ENST00000506488 PEG3Q9GZU2 1588 aa24.62■■□□□ 1.53
MIB2-220ENST00000506488 ERICH3Q5RHP9 1530 aa24.61■■□□□ 1.53
MIB2-220ENST00000506488 MAPKBP1O60336 1514 aa24.57■■□□□ 1.52
MIB2-220ENST00000506488 PRXQ9BXM0 1461 aa24.56■■□□□ 1.52
MIB2-220ENST00000506488 ITGAEP38570 1179 aa24.56■■□□□ 1.52
MIB2-220ENST00000506488 RAB3GAP2Q9H2M9 1393 aa24.55■■□□□ 1.52
MIB2-220ENST00000506488 TOP2BQ02880 1626 aa24.52■■□□□ 1.52
MIB2-220ENST00000506488 PPP1R15AO75807 674 aaPredicted RBP24.52■■□□□ 1.52
MIB2-220ENST00000506488 CCER2I3L3R5 266 aa24.5■■□□□ 1.51
MIB2-220ENST00000506488 MSH5O43196 834 aa24.5■■□□□ 1.51
MIB2-220ENST00000506488 TRIM52Q96A61 297 aa24.49■■□□□ 1.51
MIB2-220ENST00000506488 WDR97A6NE52 1622 aa24.48■■□□□ 1.51
MIB2-220ENST00000506488 ANP32CO43423 234 aa24.42■■□□□ 1.5
MIB2-220ENST00000506488 SETD5Q9C0A6 1442 aa24.4■■□□□ 1.5
MIB2-220ENST00000506488 FANCIQ9NVI1 1328 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms