RNA–Protein interactions for RNA: ENST00000506023.1

BRIX1-202, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 3

Gene BRIX1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-202ENST00000506023 NISCHQ9Y2I1 1504 aa26.61■■□□□ 1.85
BRIX1-202ENST00000506023 ABCC9O60706 1549 aa24.15■■□□□ 1.46
BRIX1-202ENST00000506023 CCDC180Q9P1Z9 1646 aa23.99■■□□□ 1.43
BRIX1-202ENST00000506023 AEBP2Q6ZN18 517 aaPredicted RBP22.94■■□□□ 1.26
BRIX1-202ENST00000506023 DNAJC5BQ9UF47 199 aa22.89■■□□□ 1.25
BRIX1-202ENST00000506023 RB1CC1Q8TDY2 1594 aa22.85■■□□□ 1.25
BRIX1-202ENST00000506023 NACADO15069 1562 aa22.64■■□□□ 1.22
BRIX1-202ENST00000506023 UNC13AQ9UPW8 1703 aa22.6■■□□□ 1.21
BRIX1-202ENST00000506023 PABPN1Q86U42 306 aaKnown RBP eCLIP22.41■■□□□ 1.18
BRIX1-202ENST00000506023 DCAF8L2P0C7V8 631 aa22.37■■□□□ 1.17
BRIX1-202ENST00000506023 BICRAQ9NZM4 1560 aa22.37■■□□□ 1.17
BRIX1-202ENST00000506023 MYO15BQ96JP2 1530 aa22.26■■□□□ 1.15
BRIX1-202ENST00000506023 ZCCHC6Q5VYS8 1495 aaKnown RBP22.04■■□□□ 1.12
BRIX1-202ENST00000506023 DCAF1Q9Y4B6 1507 aa21.93■■□□□ 1.1
BRIX1-202ENST00000506023 SCRIBQ14160 1630 aa21.88■■□□□ 1.09
BRIX1-202ENST00000506023 CC2D2AQ9P2K1 1620 aa21.85■■□□□ 1.09
BRIX1-202ENST00000506023 SHROOM4Q9ULL8 1493 aa21.81■■□□□ 1.08
BRIX1-202ENST00000506023 EIF4G1Q04637 1599 aaKnown RBP21.74■■□□□ 1.07
BRIX1-202ENST00000506023 CECR2Q9BXF3 1484 aa21.73■■□□□ 1.07
BRIX1-202ENST00000506023 CHIC1Q5VXU3 224 aa21.56■■□□□ 1.04
BRIX1-202ENST00000506023 DNAJC5Q9H3Z4 198 aa20.99■□□□□ 0.95
BRIX1-202ENST00000506023 NCAPD3P42695 1498 aa20.91■□□□□ 0.94
BRIX1-202ENST00000506023 ATAD2BQ9ULI0 1458 aa20.86■□□□□ 0.93
BRIX1-202ENST00000506023 SMARCA4P51532 1647 aa20.85■□□□□ 0.93
BRIX1-202ENST00000506023 CUX2O14529 1486 aa20.81■□□□□ 0.92
BRIX1-202ENST00000506023 HMGXB3Q12766 1538 aa20.77■□□□□ 0.92
BRIX1-202ENST00000506023 NESP48681 1621 aa20.76■□□□□ 0.91
BRIX1-202ENST00000506023 ERCC6Q03468 1493 aa20.75■□□□□ 0.91
BRIX1-202ENST00000506023 SMARCA2P51531 1590 aa20.73■□□□□ 0.91
BRIX1-202ENST00000506023 PEG3Q9GZU2 1588 aa20.63■□□□□ 0.89
BRIX1-202ENST00000506023 THOC2Q8NI27 1593 aaKnown RBP20.62■□□□□ 0.89
BRIX1-202ENST00000506023 BAZ1AQ9NRL2 1556 aaPredicted RBP20.62■□□□□ 0.89
BRIX1-202ENST00000506023 BAZ1BQ9UIG0 1483 aaKnown RBP20.6■□□□□ 0.89
BRIX1-202ENST00000506023 MROH2BQ7Z745 1585 aa20.56■□□□□ 0.88
BRIX1-202ENST00000506023 KIF21AQ7Z4S6 1674 aa20.54■□□□□ 0.88
BRIX1-202ENST00000506023 LAMC3Q9Y6N6 1575 aa20.48■□□□□ 0.87
BRIX1-202ENST00000506023 WIZO95785 1651 aa20.35■□□□□ 0.85
BRIX1-202ENST00000506023 PDS5BQ9NTI5 1447 aa20.27■□□□□ 0.83
BRIX1-202ENST00000506023 CADPSQ9ULU8 1353 aa20.22■□□□□ 0.83
BRIX1-202ENST00000506023 WDR62O43379 1518 aa20.22■□□□□ 0.83
BRIX1-202ENST00000506023 MRC2Q9UBG0 1479 aa20.19■□□□□ 0.82
BRIX1-202ENST00000506023 CEP164Q9UPV0 1460 aa20.05■□□□□ 0.8
BRIX1-202ENST00000506023 FANCD2Q9BXW9 1451 aa20.05■□□□□ 0.8
BRIX1-202ENST00000506023 CFTRP13569 1480 aa20.01■□□□□ 0.79
BRIX1-202ENST00000506023 RSF1Q96T23 1441 aaPredicted RBP20.01■□□□□ 0.79
BRIX1-202ENST00000506023 TOP2AP11388 1531 aaKnown RBP19.98■□□□□ 0.79
BRIX1-202ENST00000506023 TRIM41Q8WV44 630 aa19.98■□□□□ 0.79
BRIX1-202ENST00000506023 URB2Q14146 1524 aaKnown RBP19.97■□□□□ 0.79
BRIX1-202ENST00000506023 PRDM2Q13029 1718 aa19.93■□□□□ 0.78
BRIX1-202ENST00000506023 ZNF608Q9ULD9 1512 aaPredicted RBP19.76■□□□□ 0.75
BRIX1-202ENST00000506023 CCDC88BA6NC98 1476 aa19.76■□□□□ 0.75
BRIX1-202ENST00000506023 OSCARQ8IYS5 282 aa19.73■□□□□ 0.75
BRIX1-202ENST00000506023 RIMBP3CA6NJZ7 1639 aa19.73■□□□□ 0.75
BRIX1-202ENST00000506023 RIMBP3BA6NNM3 1639 aa19.73■□□□□ 0.75
BRIX1-202ENST00000506023 RIMBP3Q9UFD9 1639 aa19.73■□□□□ 0.75
BRIX1-202ENST00000506023 TOPBP1Q92547 1522 aa19.68■□□□□ 0.74
BRIX1-202ENST00000506023 EIF4G3O43432 1585 aaKnown RBP19.66■□□□□ 0.74
BRIX1-202ENST00000506023 IFT140Q96RY7 1462 aa19.65■□□□□ 0.74
BRIX1-202ENST00000506023 CHD1O14646 1710 aa19.6■□□□□ 0.73
BRIX1-202ENST00000506023 TARBP1Q13395 1621 aaKnown RBP19.6■□□□□ 0.73
BRIX1-202ENST00000506023 DNMBPQ6XZF7 1577 aa19.59■□□□□ 0.73
BRIX1-202ENST00000506023 ARHGEF11O15085 1522 aa19.59■□□□□ 0.73
BRIX1-202ENST00000506023 SENP3Q9H4L4 574 aaPredicted RBP19.58■□□□□ 0.72
BRIX1-202ENST00000506023 AQRO60306 1485 aaKnown RBP eCLIP19.5■□□□□ 0.716e-7■■■□□ 16.7
BRIX1-202ENST00000506023 ABCC8Q09428 1581 aa19.48■□□□□ 0.71
BRIX1-202ENST00000506023 POLA1P09884 1462 aaPredicted RBP19.48■□□□□ 0.71
BRIX1-202ENST00000506023 RAD54L2Q9Y4B4 1467 aa19.43■□□□□ 0.7
BRIX1-202ENST00000506023 ARAP1Q96P48 1450 aa19.41■□□□□ 0.7
BRIX1-202ENST00000506023 CYB5RLQ6IPT4 315 aa19.34■□□□□ 0.69
BRIX1-202ENST00000506023 WDR97A6NE52 1622 aa19.33■□□□□ 0.68
BRIX1-202ENST00000506023 CUX1P39880 1505 aa19.32■□□□□ 0.68
BRIX1-202ENST00000506023 FGD5Q6ZNL6 1462 aa19.32■□□□□ 0.68
BRIX1-202ENST00000506023 TDRD9Q8NDG6 1382 aaKnown RBP19.32■□□□□ 0.68
BRIX1-202ENST00000506023 CLASP1Q7Z460 1538 aa19.31■□□□□ 0.68
BRIX1-202ENST00000506023 SNAPC4Q5SXM2 1469 aa19.29■□□□□ 0.68
BRIX1-202ENST00000506023 SOGA1O94964 1423 aa19.29■□□□□ 0.68
BRIX1-202ENST00000506023 FBLN2P98095 1184 aa19.27■□□□□ 0.68
BRIX1-202ENST00000506023 PHF23Q9BUL5 403 aaPredicted RBP19.27■□□□□ 0.68
BRIX1-202ENST00000506023 PBRM1Q86U86 1689 aa19.24■□□□□ 0.67
BRIX1-202ENST00000506023 MAGI1Q96QZ7 1491 aaPredicted RBP19.17■□□□□ 0.66
BRIX1-202ENST00000506023 SYNJ1O43426 1573 aa19.17■□□□□ 0.66
BRIX1-202ENST00000506023 GRIN2BQ13224 1484 aa19.15■□□□□ 0.66
BRIX1-202ENST00000506023 ABCA5Q8WWZ7 1642 aa19.14■□□□□ 0.66
BRIX1-202ENST00000506023 SYNJ2O15056 1496 aa19.13■□□□□ 0.65
BRIX1-202ENST00000506023 TRHP20396 242 aaPredicted RBP19.12■□□□□ 0.65
BRIX1-202ENST00000506023 GAPVD1Q14C86 1478 aa19.08■□□□□ 0.64
BRIX1-202ENST00000506023 ERCC6L2Q5T890 1561 aa19.07■□□□□ 0.64
BRIX1-202ENST00000506023 CHMP7Q8WUX9 453 aaPredicted RBP19.07■□□□□ 0.64
BRIX1-202ENST00000506023 ABCA10Q8WWZ4 1543 aa19.06■□□□□ 0.64
BRIX1-202ENST00000506023 ADAMTS12P58397 1594 aa18.99■□□□□ 0.63
BRIX1-202ENST00000506023 CEP170Q5SW79 1584 aa18.99■□□□□ 0.63
BRIX1-202ENST00000506023 BIVM-ERCC5R4GMW8 1640 aa18.98■□□□□ 0.63
BRIX1-202ENST00000506023 GRIN2AQ12879 1464 aa18.96■□□□□ 0.63
BRIX1-202ENST00000506023 TOP2BQ02880 1626 aa18.93■□□□□ 0.62
BRIX1-202ENST00000506023 SHROOM2Q13796 1616 aa18.92■□□□□ 0.62
BRIX1-202ENST00000506023 NUP160Q12769 1436 aa18.91■□□□□ 0.62
BRIX1-202ENST00000506023 SUPT5HO00267 1087 aaKnown RBP18.88■□□□□ 0.61
BRIX1-202ENST00000506023 WRNQ14191 1432 aaPredicted RBP eCLIP18.85■□□□□ 0.61
BRIX1-202ENST00000506023 KIF13AQ9H1H9 1805 aa18.85■□□□□ 0.61
BRIX1-202ENST00000506023 FHAD1B1AJZ9 1412 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms